DRSC/TRiP Functional Genomics Resources

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Protein Alignment Con and lrig3

DIOPT Version :10

Sequence 1:NP_523930.3 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001103817.1 Gene:lrig3 / 564554 ZFINID:ZDB-GENE-130530-866 Length:1070 Species:Danio rerio


Alignment Length:751 Identity:152/751 - (20%)
Similarity:258/751 - (34%) Gaps:247/751 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SGSTGYSGPMDSTGFCTRRRDMKLMCYCTPDENHVPVQKAECWVFSEGLHQNDTTWTRFYQQKRL 158
            ||.|..:|  ||..  |.......:|.||.:       .|:|.....|         |..::...
Zfish    18 SGFTAVTG--DSRR--TEHEPCPSVCSCTGN-------LADCSRLKAG---------RTVERLPA 62

  Fly   159 RELKFVIQNNARLDYIPTMIIEPLKNLSSIVIEYSQVEIVKSYAFANLPFLERIILNNNHIMALD 223
            |..:..:.:| :|...|..:...|..||.|.:..::.|.:.... .|...|..:||.:|.|..:.
Zfish    63 RITRLDLSHN-KLRVFPEALFSSLPQLSEIKLSNNEFESIPDLG-PNAGNLSSLILASNRIGRVS 125

  Fly   224 QDAFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADM-ARLTFLNLA 287
            .:..:..:.|..|:|.:|.|.::...||..:|| :.||:|||.||||..|.|::: :.|..|.|.
Zfish   126 SERLSPLLTLETLDLSNNNIVDVYAGAFPPIPL-KNLFMNNNRISTLEHGCFSNLSSSLLVLKLN 189

  Fly   288 HNQINVLTSEIFR-----------------------------------------------GLGNL 305
            .|::|.:.::||.                                               ||.|:
Zfish   190 KNRLNSIPAKIFSLPHLQHLELSRNRLRRVEGLTFQGLHGLRSLKMQRNGISRLMDGAFWGLNNM 254

  Fly   306 NVLKLTRNNLNFIG--------------------DTVFAELW----SLSELELDDNRIERISERA 346
            .||:|..|||..:.                    ..:..:.|    .|:||:|..|::.|:.|.:
Zfish   255 EVLQLEFNNLTEVSKGWLYGLLTLQQLHLSHNSISRIKPDAWEFCQKLAELDLSWNQLSRLEEGS 319

  Fly   347 LDGLNTLKTLNLRNNLLKKIDNGLLRGTPALLSIN---------------------------VQA 384
            ..||:.|:.|::.||.:..|.:|..||...|.:::                           :|.
Zfish   320 FVGLSVLEQLHIGNNRISFIADGAFRGLTNLQTLDLKFNEISWTIEDMNGPFSALDNLRKLFLQG 384

  Fly   385 NKLETLTFYTF-------------QPIMDNLVNS------TSELLVSDNKFICDCRLQWIFELKN 430
            |::.::|..:|             ..||....|:      .|||.::.:..:|||:|:|.     
Zfish   385 NRIRSVTRKSFTGLEMLEQLDLSNNAIMSLQANAFSQMKKLSELHLNTSSLLCDCQLKWF----- 444

  Fly   431 RTRHLQLRDSL---EDLHCTLQEPKLSHFVDPVPPTILDVLNIGGFTAIGSNSASMGGVGNSVVG 492
                     ||   |.....|.....:|      |.:|.                    |.||..
Zfish   445 ---------SLWVAEQAFLALLNASCAH------PHLLK--------------------GRSVFS 474

  Fly   493 SSYSGLTMDDSRK---HLGSRSRQALRGQR-QFASSAENVVESKMRRRRKRQEE-VKEKDLAAVA 552
            .:......||..|   .:...::.|::|.. .|..||.:..:|.|....|:..| :.|.::.  .
Zfish   475 IAQDEFVCDDFPKPQITVQPETQSAIKGNNVTFVCSAASSSDSPMTFAWKKDNELLSEPEIQ--N 537

  Fly   553 PAHKRYDYYDDNNGGMSLGHGLDLDDNLSLHKQGFYGAGSPVVGHNDVDVLMTSHSASGDALDIL 617
            .||.|       ......|...:....|.|.:..|...|.       ...::::|..|..:....
Zfish   538 QAHVR-------AAAGETGELTEYTTTLQLRQVEFTSEGR-------YQCVISNHFGSSYSNKAK 588

  Fly   618 TTKNAIYIKLFLLKPEM-----------LPC----HD------ELSDPTELPLSRD--------- 652
            .|.|.:   .|..|..|           |.|    |.      :....|:.|.:|:         
Zfish   589 LTVNML---PFFTKTPMDLTIRAGATARLECAASGHPSPQIAWQKDGGTDFPAARERRMHVMPRD 650

  Fly   653 ----LMDVRS-NVG----QDMSTAGANSLAQGMTII 679
                ::||:: ::|    ...:||||.|....:|::
Zfish   651 DVFFIVDVKTEDIGVYSCTAQNTAGAISANATLTVL 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_523930.3 LRR <157..459 CDD:443914 90/422 (21%)
leucine-rich repeat 185..208 CDD:275380 5/22 (23%)
leucine-rich repeat 209..232 CDD:275380 5/22 (23%)
leucine-rich repeat 233..256 CDD:275380 7/22 (32%)
leucine-rich repeat 257..280 CDD:275380 11/23 (48%)
leucine-rich repeat 281..304 CDD:275380 9/69 (13%)
leucine-rich repeat 305..328 CDD:275380 7/46 (15%)
leucine-rich repeat 329..352 CDD:275380 9/22 (41%)
leucine-rich repeat 353..376 CDD:275380 8/22 (36%)
lrig3NP_001103817.1 leucine-rich repeat 64..87 CDD:275378 4/23 (17%)
LRR 88..436 CDD:443914 75/349 (21%)
leucine-rich repeat 88..110 CDD:275378 5/22 (23%)
leucine-rich repeat 111..134 CDD:275380 5/22 (23%)
leucine-rich repeat 135..156 CDD:275380 7/20 (35%)
leucine-rich repeat 158..205 CDD:275380 19/47 (40%)
leucine-rich repeat 206..229 CDD:275380 0/22 (0%)
leucine-rich repeat 230..253 CDD:275380 2/22 (9%)
leucine-rich repeat 254..277 CDD:275380 6/22 (27%)
leucine-rich repeat 278..301 CDD:275380 1/22 (5%)
leucine-rich repeat 302..325 CDD:275380 9/22 (41%)
leucine-rich repeat 326..349 CDD:275380 8/22 (36%)
leucine-rich repeat 377..400 CDD:275380 4/22 (18%)
leucine-rich repeat 401..422 CDD:275380 3/20 (15%)
PCC 405..>483 CDD:188093 21/117 (18%)
Ig_3 487..577 CDD:464046 19/105 (18%)
IgI_LRIG1-like 597..686 CDD:409420 17/88 (19%)
Ig strand A' 603..607 CDD:409420 0/3 (0%)
Ig strand B 610..619 CDD:409420 2/8 (25%)
Ig strand C 625..630 CDD:409420 0/4 (0%)
Ig strand C' 633..635 CDD:409420 0/1 (0%)
Ig strand D 643..647 CDD:409420 0/3 (0%)
Ig strand E 651..658 CDD:409420 0/6 (0%)
Ig strand F 664..672 CDD:409420 1/7 (14%)
Ig strand G 675..686 CDD:409420 4/10 (40%)
I-set 689..776 CDD:400151
Ig strand B 706..710 CDD:409353
Ig strand C 719..723 CDD:409353
Ig strand E 742..746 CDD:409353
Ig strand F 756..761 CDD:409353
Ig strand G 769..772 CDD:409353
Blue background indicates that the domain is not in the aligned region.

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