DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Con and tlr22

DIOPT Version :9

Sequence 1:NP_001246635.1 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001122147.2 Gene:tlr22 / 403135 ZFINID:ZDB-GENE-040220-5 Length:955 Species:Danio rerio


Alignment Length:407 Identity:96/407 - (23%)
Similarity:169/407 - (41%) Gaps:87/407 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 CWVFSE----GLHQNDTTWTRFYQQKRLRELKFVIQNNARL-----------------DYIPTMI 178
            |...||    |...::.:.:.|...|:|::|:..|....|:                 ::|..:.
Zfish   336 CSELSELDLGGNEISNLSQSMFRGFKQLKKLQLQINKLTRVTNSFQILTSLEFIDLSRNHIHKLS 400

  Fly   179 IEPLKNLSSIVIEY---SQVEIVKSYAFANLPFLERIILNNNHIMALDQDAFAN-HIRLRELNLE 239
            .....||:.:...|   :::..::|..|.:|..||.:.|..|:::.:| |.|:| ...|:||.|.
Zfish   401 CNDFANLTQVKTLYLYSNKISSIRSCLFKDLKSLEVLRLGTNNLLKID-DVFSNGPYFLKELQLS 464

  Fly   240 HNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQI--NVLTS--EIFR 300
            :|::..:..:.|.|||....|.|.:|.||.:....|..:..||.|.|:.|:|  ..||:  .:|.
Zfish   465 YNKLSLIKSHTFGNLPQLNNLSLEDNQISEIEGYAFGGLENLTSLFLSSNKITGKTLTTHPNVFS 529

  Fly   301 GLGNLNVLKLTRNNLNFIGD----TVFAELWSLSELELDDNR--IERISERALDGLNTLKTLNLR 359
            |:.||..|.|..|:::|..|    .:|.:|.:|.||.|...|  |.::....|:||::|:...:.
Zfish   530 GMPNLQNLDLFANSISFAYDKLKYPLFKDLKNLRELSLYSQRRGIGQLPSNLLEGLSSLQMFYIG 594

  Fly   360 NNLLKKIDNGLLRGTPALLSINVQANKL---ETLTFYTFQPIMD--------------------- 400
            |..|.:::..|...||.|..:::..|.|   :.:....|.||.:                     
Zfish   595 NTNLNQLNPNLFNFTPQLWFLDLSKNALREDDAIPPELFHPIPNLTKLIISRTQLRSLNFLLGAN 659

  Fly   401 -----------NLVNSTSELLV-----------SDNKFICDCRLQWIFELKNRTRHLQLRDSLED 443
                       |.::|.:|.|:           .:|.|.|||...:..:...:....|:. .|..
Zfish   660 LNKLSTLRASGNEIDSVNETLIKSLPRLAVLDLQNNTFTCDCNNAFFIDWAKKNESTQVY-YLSR 723

  Fly   444 LHC----TLQEPKLSHF 456
            ..|    ||:...|:.|
Zfish   724 YTCSYPRTLRGTSLAEF 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_001246635.1 LRR_RI <147..291 CDD:238064 41/164 (25%)
LRR_8 183..243 CDD:290566 19/63 (30%)
leucine-rich repeat 185..208 CDD:275380 5/25 (20%)
leucine-rich repeat 209..232 CDD:275380 8/23 (35%)
LRR_RI <225..416 CDD:238064 63/247 (26%)
LRR_8 232..291 CDD:290566 20/58 (34%)
leucine-rich repeat 233..256 CDD:275380 8/22 (36%)
leucine-rich repeat 257..280 CDD:275380 6/22 (27%)
leucine-rich repeat 281..304 CDD:275380 10/26 (38%)
LRR_8 304..363 CDD:290566 20/64 (31%)
leucine-rich repeat 305..328 CDD:275380 8/26 (31%)
leucine-rich repeat 329..352 CDD:275380 9/24 (38%)
LRR_8 352..416 CDD:290566 17/109 (16%)
leucine-rich repeat 353..376 CDD:275380 5/22 (23%)
LRRCT 414..>450 CDD:214507 10/39 (26%)
tlr22NP_001122147.2 leucine-rich repeat 458..481 CDD:275380 8/22 (36%)
LRR_RI 461..700 CDD:238064 59/238 (25%)
LRR_8 480..544 CDD:290566 22/63 (35%)
leucine-rich repeat 482..505 CDD:275380 6/22 (27%)
leucine-rich repeat 506..533 CDD:275380 10/26 (38%)
leucine-rich repeat 534..561 CDD:275380 8/26 (31%)
LRR_8 560..622 CDD:290566 17/61 (28%)
leucine-rich repeat 562..587 CDD:275380 9/24 (38%)
leucine-rich repeat 588..606 CDD:275380 3/17 (18%)
leucine-rich repeat 612..638 CDD:275380 6/25 (24%)
LRR_8 637..695 CDD:290566 4/57 (7%)
leucine-rich repeat 639..662 CDD:275380 0/22 (0%)
leucine-rich repeat 663..686 CDD:275380 4/22 (18%)
leucine-rich repeat 687..705 CDD:275380 5/17 (29%)
TIR 802..945 CDD:214587
leucine-rich repeat 71..91 CDD:275380
LRR_8 91..150 CDD:290566
leucine-rich repeat 92..115 CDD:275380
leucine-rich repeat 116..139 CDD:275380
LRR_8 138..199 CDD:290566
leucine-rich repeat 140..163 CDD:275380
leucine-rich repeat 164..213 CDD:275380
leucine-rich repeat 214..338 CDD:275380 1/1 (100%)
LRR_8 337..396 CDD:290566 9/58 (16%)
leucine-rich repeat 339..362 CDD:275380 4/22 (18%)
LRR_RI <363..494 CDD:238064 32/131 (24%)
leucine-rich repeat 363..385 CDD:275380 4/21 (19%)
LRR_8 384..444 CDD:290566 11/59 (19%)
leucine-rich repeat 386..409 CDD:275380 3/22 (14%)
leucine-rich repeat 410..433 CDD:275380 4/22 (18%)
LRR_8 432..492 CDD:290566 20/60 (33%)
leucine-rich repeat 434..457 CDD:275380 8/23 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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