DRSC/TRiP Functional Genomics Resources

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Protein Alignment Con and Lrrc24

DIOPT Version :10

Sequence 1:NP_523930.3 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_932787.1 Gene:Lrrc24 / 378937 MGIID:3605040 Length:521 Species:Mus musculus


Alignment Length:217 Identity:65/217 - (29%)
Similarity:94/217 - (43%) Gaps:33/217 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 LNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQINVLTSEIFR 300
            |.|:.|.|..:::.:...|.....|:|:||.:..|..|.|....||..|.|..|::..|....|.
Mouse    63 LFLQDNSIAHLEQGSLAPLAALRHLYLHNNTLRALESGAFRAQPRLLELALTGNRLRGLRGGAFV 127

  Fly   301 GLGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNNLLKK 365
            ||..|.||.|..|.|..:.|..|..|..|.||.|.:|.||.:.::||.||::|..|:|       
Mouse   128 GLVQLRVLYLAGNQLAKLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDL------- 185

  Fly   366 IDNGLLRGTPALLSINVQANKLETLTFYTFQPIMDNLVNSTSELLVSDNKFICDCRLQWIFE-LK 429
                             ..|:|.|::....||:     :|...|.:::|.:.|||.|.|:.. :|
Mouse   186 -----------------SRNQLGTISKEALQPL-----SSLQVLRLTENPWRCDCALHWLGSWIK 228

  Fly   430 NRTRHLQLRDSLEDLHCTLQEP 451
            ...|.|.   |..|...|..||
Mouse   229 EGGRRLL---SSRDKKITCAEP 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_523930.3 LRR <157..459 CDD:443914 65/217 (30%)
leucine-rich repeat 185..208 CDD:275380
leucine-rich repeat 209..232 CDD:275380
leucine-rich repeat 233..256 CDD:275380 5/19 (26%)
leucine-rich repeat 257..280 CDD:275380 7/22 (32%)
leucine-rich repeat 281..304 CDD:275380 8/22 (36%)
leucine-rich repeat 305..328 CDD:275380 9/22 (41%)
leucine-rich repeat 329..352 CDD:275380 11/22 (50%)
leucine-rich repeat 353..376 CDD:275380 3/22 (14%)
Lrrc24NP_932787.1 LRR 1 59..80 4/16 (25%)
LRR <61..>213 CDD:443914 51/178 (29%)
leucine-rich repeat 61..83 CDD:275380 5/19 (26%)
LRR 2 83..104 7/20 (35%)
LRR_8 84..142 CDD:404697 21/57 (37%)
leucine-rich repeat 84..107 CDD:275380 7/22 (32%)
LRR 3 107..128 7/20 (35%)
leucine-rich repeat 108..131 CDD:275380 8/22 (36%)
LRR 4 131..152 8/20 (40%)
leucine-rich repeat 132..155 CDD:275380 9/22 (41%)
LRR 5 155..176 9/20 (45%)
leucine-rich repeat 156..179 CDD:275380 11/22 (50%)
LRR 6 179..200 6/44 (14%)
leucine-rich repeat 180..203 CDD:275380 8/51 (16%)
PCC 188..>259 CDD:188093 21/68 (31%)
Ig_3 267..357 CDD:464046
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..330
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..395
Blue background indicates that the domain is not in the aligned region.

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