Sequence 1: | NP_001246635.1 | Gene: | Con / 38590 | FlyBaseID: | FBgn0005775 | Length: | 691 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001100254.1 | Gene: | Lgr5 / 299802 | RGDID: | 1307733 | Length: | 907 | Species: | Rattus norvegicus |
Alignment Length: | 412 | Identity: | 109/412 - (26%) |
---|---|---|---|
Similarity: | 170/412 - (41%) | Gaps: | 89/412 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 151 RFYQQKRLRELKFVIQNNARLDYIPTMIIEPLKNLSSIVIEYSQVEIVKSYAFANLPFLERIILN 215
Fly 216 NNHIMALDQDAFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMAR 280
Fly 281 LTFLNLAHNQINVLTSEIFRGLGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISER 345
Fly 346 ALDGLNTLKTLNLRNNLLKKID---------------NGL--------LRGTPALLSINVQANKL 387
Fly 388 ETLTFYTFQPIMDNLVN----STSELLVSDNKFICDC--------RLQWIFELKNRT-------R 433
Fly 434 HLQL-RDSLEDLHCTLQEPKLSHFVDPVPPTI-LDVLNIGGFTAIGSNSASMGGVGNSVVGSSYS 496
Fly 497 GLTMDDSRKHL---GSRSRQAL 515 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Con | NP_001246635.1 | LRR_RI | <147..291 | CDD:238064 | 39/139 (28%) |
LRR_8 | 183..243 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 185..208 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 209..232 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | <225..416 | CDD:238064 | 60/217 (28%) | ||
LRR_8 | 232..291 | CDD:290566 | 17/58 (29%) | ||
leucine-rich repeat | 233..256 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 257..280 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 281..304 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 304..363 | CDD:290566 | 21/58 (36%) | ||
leucine-rich repeat | 305..328 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 329..352 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 352..416 | CDD:290566 | 19/90 (21%) | ||
leucine-rich repeat | 353..376 | CDD:275380 | 8/45 (18%) | ||
LRRCT | 414..>450 | CDD:214507 | 11/51 (22%) | ||
Lgr5 | NP_001100254.1 | LRRNT | 33..70 | CDD:214470 | |
LRR 1 | 44..64 | ||||
LRR 2 | 65..88 |