DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Con and LRIT1

DIOPT Version :10

Sequence 1:NP_523930.3 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_056428.1 Gene:LRIT1 / 26103 HGNCID:23404 Length:623 Species:Homo sapiens


Alignment Length:444 Identity:98/444 - (22%)
Similarity:142/444 - (31%) Gaps:128/444 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 LKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNNLLKKIDNGLLR 372
            |:|.|..:..:....|..|..|.:|.|..|.:..::...|.||..|:.|.|..|.|.......||
Human    64 LRLERTAIRRVPGEAFRPLGRLEQLWLPYNALSELNALMLRGLRRLRELRLPGNRLAAFPWAALR 128

  Fly   373 GTPALLSINVQANK-----------LETLTFYTFQPIMDNLVNSTSELLVS-------------- 412
            ..|.|..:::|||:           ||.|||....  .:.|:....||:||              
Human   129 DAPKLRLLDLQANRLSAVPAEAARFLENLTFLDLS--SNQLMRLPQELIVSWAHLETGIFPPGHH 191

  Fly   413 --------DNKFICDCRLQWIFELKNRTRHLQLRDSLEDLHCTLQEPKLSHFVDPVPPTILDVLN 469
                    ||.:.|||||.                            .|.|.:|...|.:     
Human   192 PRRVLGLQDNPWACDCRLY----------------------------DLVHLLDGWAPNL----- 223

  Fly   470 IGGFTAIGSNSASMGGVGNSVVGSSYSGLTMDDSRK------HLGSRS-RQALRGQRQFASSAEN 527
              .|.......||    ..|:.|.::|.|.:   ||      |.|..| |..|.|.......|..
Human   224 --AFIETELRCAS----PRSLAGVAFSQLEL---RKCQGPELHPGVASIRSLLGGTALLRCGATG 279

  Fly   528 VVESKMRRRRKRQEEVKEKDLAAVAPAHKRYDYYDDNNGGMSLG-----HGLDLDDNLSLHKQGF 587
            |...:|..||.....:.       ...|:  :...|......||     | ||..|.:...| .|
Human   280 VPGPEMSWRRANGRPLN-------GTVHQ--EVSSDGTSWTLLGLPAVSH-LDSGDYICQAK-NF 333

  Fly   588 YGAGSPVVGHNDVDVLM------TSHSASGDAL--------DILTTKNAIYIKLF--LLKPEMLP 636
            .||...|     :.:::      |.||.|..||        :.....|.:..:..  :.||.:|.
Human   334 LGASETV-----ISLIVTEPPTSTEHSGSPGALWARTGGGGEAAAYNNKLVARHVPQIPKPAVLA 393

  Fly   637 CHDEL-SDPTELPLSRDLMDVRSNVGQDMSTAGANSLAQGMTII------VSLV 683
            ....: |...||.|....||....:....:......:.:.:.::      ||||
Human   394 TGPSVPSTKEELTLEHFQMDALGELSDGRAGPSEARMVRSVKVVGDTYHSVSLV 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_523930.3 LRR <157..459 CDD:443914 43/183 (23%)
leucine-rich repeat 185..208 CDD:275380
leucine-rich repeat 209..232 CDD:275380
leucine-rich repeat 233..256 CDD:275380
leucine-rich repeat 257..280 CDD:275380
leucine-rich repeat 281..304 CDD:275380
leucine-rich repeat 305..328 CDD:275380 5/19 (26%)
leucine-rich repeat 329..352 CDD:275380 7/22 (32%)
leucine-rich repeat 353..376 CDD:275380 7/22 (32%)
LRIT1NP_056428.1 LRR 1 60..81 4/16 (25%)
leucine-rich repeat 61..84 CDD:275378 5/19 (26%)
LRR <63..>174 CDD:443914 30/111 (27%)
LRR 2 84..105 5/20 (25%)
leucine-rich repeat 85..132 CDD:275378 14/46 (30%)
LRR 3 108..129 6/20 (30%)
LRR 4 132..153 4/20 (20%)
leucine-rich repeat 133..156 CDD:275378 5/22 (23%)
LRR 5 156..177 6/22 (27%)
leucine-rich repeat 157..180 CDD:275378 8/24 (33%)
leucine-rich repeat 181..205 CDD:275378 2/23 (9%)
LRRCT 201..>240 CDD:214507 14/77 (18%)
IG_like 267..345 CDD:214653 20/93 (22%)
Ig strand B 271..275 CDD:409353 0/3 (0%)
Ig strand C 284..288 CDD:409353 1/3 (33%)
Ig strand E 308..312 CDD:409353 0/3 (0%)
Ig strand F 325..330 CDD:409353 1/4 (25%)
Ig strand G 338..341 CDD:409353 1/7 (14%)
FN3 431..498 CDD:214495 4/17 (24%)
LRR 6. /evidence=ECO:0000305 571..594
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.