DRSC/TRiP Functional Genomics Resources

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Protein Alignment Con and Lgi4

DIOPT Version :10

Sequence 1:NP_523930.3 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_653139.2 Gene:Lgi4 / 243914 MGIID:2180197 Length:537 Species:Mus musculus


Alignment Length:264 Identity:70/264 - (26%)
Similarity:107/264 - (40%) Gaps:57/264 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 LTFLNLAHNQINVLTSEIFRGLGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISER 345
            |..|:|....::.|.:..|..:.:|::|..|.|..:.|....|..|..|..|.::||:|..||:.
Mouse    54 LLSLSLVRMGVSRLKAGSFLKMPSLHLLLFTSNTFSVIEGDAFIGLSYLQYLFIEDNKIGSISKN 118

  Fly   346 ALDGLNTLKTLNLRNNLLKKIDNGLLRGTPALLSINVQANKLETLTFYTFQPIMDNLVNSTSELL 410
            ||.||.:|..|:|.||.|:.:...|.||             |||||....:              
Mouse   119 ALRGLRSLTHLSLANNHLEALPRFLFRG-------------LETLTHVDLR-------------- 156

  Fly   411 VSDNKFICDCRLQWIFELKNRTRHLQLRDSLEDLHC----TLQEPKLSHFVDP----VPPTILDV 467
              .|.|.||||:.|:.:...     .:..|:....|    .:.:.:|:| :||    ...|.|..
Mouse   157 --GNPFQCDCRVLWLLQWMP-----TVNASVGTGACAGPPAVAQIQLNH-LDPKKFKCRATELSW 213

  Fly   468 LNIGGFTAIGSNSASMGGVGNSVVGSSYSG----LTMDDSRKHLGSRSRQALRGQRQFASSAENV 528
            |...|.:|:...|.|..|..:.|:...::|    |..|        .|.|..|.:.:.  ||.:|
Mouse   214 LQTVGESALSVESFSYQGEPHMVLAQPFAGRCLILVWD--------YSLQRFRPEEEL--SAPSV 268

  Fly   529 VESK 532
            |..|
Mouse   269 VSCK 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_523930.3 LRR <157..459 CDD:443914 48/181 (27%)
leucine-rich repeat 185..208 CDD:275380
leucine-rich repeat 209..232 CDD:275380
leucine-rich repeat 233..256 CDD:275380
leucine-rich repeat 257..280 CDD:275380
leucine-rich repeat 281..304 CDD:275380 5/22 (23%)
leucine-rich repeat 305..328 CDD:275380 7/22 (32%)
leucine-rich repeat 329..352 CDD:275380 11/22 (50%)
leucine-rich repeat 353..376 CDD:275380 9/22 (41%)
Lgi4NP_653139.2 LRR 1 53..74 5/19 (26%)
leucine-rich repeat 54..77 CDD:275378 5/22 (23%)
LRR_8 76..136 CDD:404697 23/59 (39%)
LRR 2 77..98 6/20 (30%)
leucine-rich repeat 78..101 CDD:275378 7/22 (32%)
LRR 3 101..122 9/20 (45%)
leucine-rich repeat 102..125 CDD:275378 11/22 (50%)
LRR 4 125..146 7/20 (35%)
leucine-rich repeat 126..149 CDD:275378 10/35 (29%)
PCC 131..>192 CDD:188093 21/94 (22%)
leucine-rich repeat 150..162 CDD:275378 4/27 (15%)
EAR 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 210..252 11/49 (22%)
EPTP <220..250 CDD:461033 7/29 (24%)
EAR 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 256..298 6/19 (32%)
EAR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 302..349
EAR 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 351..394
EAR 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 396..439
EPTP 396..437 CDD:461033
EAR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 441..483
EPTP 441..480 CDD:461033
EAR 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 487..532
Blue background indicates that the domain is not in the aligned region.

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