DRSC/TRiP Functional Genomics Resources

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Protein Alignment Con and Lrit3

DIOPT Version :10

Sequence 1:NP_523930.3 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:257 Identity:64/257 - (24%)
Similarity:102/257 - (39%) Gaps:57/257 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 LPLCERLFLN----NNNISTLHEGLFADMARLTFLNLAHNQINVLTSEIFRGLGNLNVLKLTRNN 314
            |.||..|.:|    |..:.|            :.|.:....:..|.:|.|..|..|..|.|..|:
Mouse    40 LVLCNDLDMNEVPANFPVDT------------SKLRIEKTVVRRLPAEAFYYLVELQYLWLAYNS 92

  Fly   315 LNFIGDTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNNLLKKIDNGLLRGTPALLS 379
            :..|..:.|..|..|.||.||.|.:......:|..:..|:||:|.||.:..:.|..:|....|..
Mouse    93 VASIETSSFYNLRQLHELRLDGNSLTAFPWVSLLDMPHLRTLDLHNNRIASVPNEAVRYLRNLTC 157

  Fly   380 INVQANKLETLTFYTFQPIMDNLVNSTSELLVS-----------------DNKFICDCRLQWIFE 427
            :::.:|:|.||.        .:.::|.|.|.|:                 ||.:.|||.:..:.|
Mouse   158 LDLSSNRLTTLP--------PDFLDSWSHLAVTPSRSPDFPPRRIILGLQDNPWFCDCHISKVIE 214

  Fly   428 LKNRTRH-LQLRDSLEDLHCT---------LQEPKLSHFVDPVPPTILDVLNIGGFTAIGSN 479
            |...|.| :.|.|.|  :.|:         .|..:|...:.  |..::....|  .:|:|||
Mouse   215 LSKVTDHAVVLLDPL--MVCSEPERFQGILFQRVELEKCLK--PSVMMSATKI--TSALGSN 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_523930.3 LRR <157..459 CDD:443914 58/235 (25%)
leucine-rich repeat 185..208 CDD:275380
leucine-rich repeat 209..232 CDD:275380
leucine-rich repeat 233..256 CDD:275380 1/1 (100%)
leucine-rich repeat 257..280 CDD:275380 5/26 (19%)
leucine-rich repeat 281..304 CDD:275380 5/22 (23%)
leucine-rich repeat 305..328 CDD:275380 7/22 (32%)
leucine-rich repeat 329..352 CDD:275380 7/22 (32%)
leucine-rich repeat 353..376 CDD:275380 8/22 (36%)
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79 5/34 (15%)
LRR <61..>170 CDD:443914 32/116 (28%)
LRR 2. /evidence=ECO:0000255 80..103 7/22 (32%)
leucine-rich repeat 83..106 CDD:275378 7/22 (32%)
LRR 3. /evidence=ECO:0000255 104..128 8/23 (35%)
leucine-rich repeat 107..130 CDD:275378 7/22 (32%)
LRR 4. /evidence=ECO:0000255 129..151 7/21 (33%)
leucine-rich repeat 131..154 CDD:275378 8/22 (36%)
LRR 5. /evidence=ECO:0000255 152..175 5/30 (17%)
leucine-rich repeat 155..168 CDD:275378 3/12 (25%)
Ig_3 253..332 CDD:464046 6/22 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..391
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..464
FN3 489..563 CDD:238020
Blue background indicates that the domain is not in the aligned region.

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