Sequence 1: | NP_001246635.1 | Gene: | Con / 38590 | FlyBaseID: | FBgn0005775 | Length: | 691 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038936217.1 | Gene: | Chadl / 100910434 | RGDID: | 6504353 | Length: | 747 | Species: | Rattus norvegicus |
Alignment Length: | 709 | Identity: | 151/709 - (21%) |
---|---|---|---|
Similarity: | 235/709 - (33%) | Gaps: | 224/709 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 119 CYCTPDENHVPVQKAECWVFSEGLHQNDTTWTRFYQQKRLRELKFVIQNNARLDYIPTMIIEPLK 183
Fly 184 NLSSIVIEYSQVEIVKSYAFANLPFLERIILNNNHIMALDQDAFANHIRLRELNLEHNQIFEMDR 248
Fly 249 YAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQINVLTSEIFRGLGNLNVLKLTRN 313
Fly 314 NLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNNLLK-------------- 364
Fly 365 --KIDNGLLRG--------TPALLSINVQANKLETLTFYTFQPIMDNLVNSTSELLVSDNKFICD 419
Fly 420 CR----LQWIFELKNRT-------RHLQ------LRDSLEDLHC---------------TLQEPK 452
Fly 453 LSH----FVDPVPPTILDVLNIGGFTAIG-SNSASMGGVGNSVVGSSYSGLT--MDDSRKHLGSR 510
Fly 511 SRQALRGQRQFASSAENVVESKMRRRRKRQEEVKEKDLAAVAPAHKRYDYYDDNN---------- 565
Fly 566 -GGMSLGHGLDLDDN----------------LSLHKQ-------------------GFYGAGSPV 594
Fly 595 VGHNDVDVLMTSHSASGDALDILTTKNAIYIKLFLLKPEM----------LPCHDELS------- 642
Fly 643 ---DPTELPLSRDLMDVRSNVG--QDMSTAGANSLAQGM-------TIIVSLVALMMIS 689 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Con | NP_001246635.1 | LRR_RI | <147..291 | CDD:238064 | 35/143 (24%) |
LRR_8 | 183..243 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 185..208 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 209..232 | CDD:275380 | 4/22 (18%) | ||
LRR_RI | <225..416 | CDD:238064 | 57/214 (27%) | ||
LRR_8 | 232..291 | CDD:290566 | 22/58 (38%) | ||
leucine-rich repeat | 233..256 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 257..280 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 281..304 | CDD:275380 | 11/22 (50%) | ||
LRR_8 | 304..363 | CDD:290566 | 16/58 (28%) | ||
leucine-rich repeat | 305..328 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 329..352 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 352..416 | CDD:290566 | 17/87 (20%) | ||
leucine-rich repeat | 353..376 | CDD:275380 | 8/46 (17%) | ||
LRRCT | 414..>450 | CDD:214507 | 14/67 (21%) | ||
Chadl | XP_038936217.1 | PLN00113 | 30..>555 | CDD:215061 | 127/591 (21%) |
leucine-rich repeat | 48..66 | CDD:275380 | 9/53 (17%) | ||
leucine-rich repeat | 68..91 | CDD:275380 | 4/25 (16%) | ||
leucine-rich repeat | 92..115 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 116..139 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 140..163 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 164..187 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 212..235 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 236..259 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 260..283 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 306..345 | CDD:275380 | 7/38 (18%) | ||
leucine-rich repeat | 425..448 | CDD:275380 | 8/22 (36%) | ||
PPP1R42 | 446..603 | CDD:411060 | 32/185 (17%) | ||
leucine-rich repeat | 449..472 | CDD:275380 | 4/34 (12%) | ||
leucine-rich repeat | 473..496 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 497..520 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 521..544 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 545..568 | CDD:275380 | 7/30 (23%) | ||
leucine-rich repeat | 569..592 | CDD:275380 | 4/30 (13%) | ||
LRR_8 | 591..653 | CDD:404697 | 11/61 (18%) | ||
leucine-rich repeat | 593..617 | CDD:275380 | 4/23 (17%) | ||
leucine-rich repeat | 618..641 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 643..665 | CDD:275380 | 5/21 (24%) | ||
leucine-rich repeat | 666..677 | CDD:275378 | |||
LRRCT | 673..721 | CDD:214507 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166334995 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |