DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Con and XB5838993

DIOPT Version :10

Sequence 1:NP_523930.3 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_002934278.1 Gene:XB5838993 / 100488097 XenbaseID:XB-GENE-5838994 Length:660 Species:Xenopus tropicalis


Alignment Length:439 Identity:96/439 - (21%)
Similarity:170/439 - (38%) Gaps:109/439 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 CYCTPDENHVPVQKAECWVFSEGLHQNDTTWTRFYQQKRLRELKFVIQNNARLDYIPTMIIEPLK 183
            |.|.|.:.||....|........:..|              .::..:|||. ...:....::.|.
 Frog    62 CTCLPLQQHVLCGNASLTSVPSNVPNN--------------TVELHLQNNL-FSELHDSFLQDLP 111

  Fly   184 NLSSIVIEYSQVEIVKSYAFANLPFLERIILNNNHIMALDQDAFANHIRLRELNLEHNQIFEMDR 248
            .|..:.:...:::.:|..||..:..::.:.|:.||:..|.:..|.|...|..|:||.|||..:..
 Frog   112 ELRGLYLSNCEIDTIKPEAFQKVTSIKYLHLDRNHLGDLQEGTFRNLSSLIYLHLESNQITSIRE 176

  Fly   249 YAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQINVLTSEIFRGLGNLNVLKLTRN 313
            ..|..|.....|:|:||.:..|.:|....:.:|.:|:|..|.::.::::.|..:.||..|.|.||
 Frog   177 GLFAPLEKLSALYLSNNLLQELTDGSLNGLTQLRWLDLGFNMLSKISNQSFTAIANLRKLNLERN 241

  Fly   314 NLNFI----------------GDTV-------FA-ELWSLSELELDDNRIERISERALDGLNTLK 354
            ||..|                |:::       |. .|..::||.||..|:|:::......|..||
 Frog   242 NLTSIPSAIRRRTGLQMLRLSGNSIKKLSSSSFGRSLRFITELYLDSLRLEKVTSMTFSKLRMLK 306

  Fly   355 TLNLRNNLLKKIDNGLLRGTPALLSINVQANKLETLTFYTFQPIMDNLVNSTSELLVSDNKFICD 419
            .|:|.|                        |.|::|:.|.        |...:::.::.|.:.||
 Frog   307 VLDLSN------------------------NSLQSLSVYN--------VKIFTKIYLTGNPWRCD 339

  Fly   420 CRLQWIFELKNRTRHLQLRDSLEDLHCTLQEPKLSHFVDPVPPTILDVLNIGGFTAIGSNSASMG 484
            |.|..:.....:|::|   |:.:..||  ..||...                             
 Frog   340 CSLIGLHTRLQQTKNL---DAEQQAHC--DAPKALK----------------------------- 370

  Fly   485 GVGNSVVGSSYSGLTMDDSRKHLG-SRSRQALRGQRQFA-SSAENVVES 531
              |.|::..:...||...:.:.:. :.|..:|.|..||| :|..:|||:
 Frog   371 --GQSLINVNLLKLTCPATGEDISVTASTPSLLGSSQFANTSIRSVVET 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_523930.3 LRR <157..459 CDD:443914 75/325 (23%)
leucine-rich repeat 185..208 CDD:275380 4/22 (18%)
leucine-rich repeat 209..232 CDD:275380 6/22 (27%)
leucine-rich repeat 233..256 CDD:275380 9/22 (41%)
leucine-rich repeat 257..280 CDD:275380 6/22 (27%)
leucine-rich repeat 281..304 CDD:275380 5/22 (23%)
leucine-rich repeat 305..328 CDD:275380 11/46 (24%)
leucine-rich repeat 329..352 CDD:275380 7/22 (32%)
leucine-rich repeat 353..376 CDD:275380 5/22 (23%)
XB5838993XP_002934278.1 LRRNT 57..91 CDD:214470 7/42 (17%)
LRR 75..>335 CDD:443914 65/306 (21%)
leucine-rich repeat 91..112 CDD:275380 4/21 (19%)
leucine-rich repeat 113..136 CDD:275380 4/22 (18%)
leucine-rich repeat 137..160 CDD:275380 6/22 (27%)
leucine-rich repeat 161..184 CDD:275380 9/22 (41%)
leucine-rich repeat 185..208 CDD:275380 6/22 (27%)
leucine-rich repeat 209..232 CDD:275380 5/22 (23%)
leucine-rich repeat 233..255 CDD:275380 8/21 (38%)
leucine-rich repeat 256..280 CDD:275380 3/23 (13%)
leucine-rich repeat 281..304 CDD:275380 7/22 (32%)
LRRCT 334..385 CDD:214507 16/86 (19%)
fn3 456..524 CDD:394996
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.