DRSC/TRiP Functional Genomics Resources

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Protein Alignment Con and elfn2

DIOPT Version :9

Sequence 1:NP_001246635.1 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001123827.1 Gene:elfn2 / 100170580 XenbaseID:XB-GENE-1001551 Length:806 Species:Xenopus tropicalis


Alignment Length:662 Identity:120/662 - (18%)
Similarity:188/662 - (28%) Gaps:286/662 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 HVPV-QKAECWVFSEGLHQNDTTWTRFYQQKRLRELKFVIQNNARLDYIPTMIIEPLKNLSSIVI 190
            |:|. .:::||:. ||  :....|           |....||....:.||..|...:.:|.    
 Frog    16 HLPTGARSDCWLI-EG--EKGYVW-----------LAICSQNQPPYETIPQHINSTVHDLR---- 62

  Fly   191 EYSQVEIVKSYAFANLPFLERIILNNNHIMALDQDAFANHIRLRELNLEHNQIFEMDRYAFRNLP 255
                                   ||.|.:..:...:.:....|.:|||..|:|:.::..||....
 Frog    63 -----------------------LNENKLKIIGYSSLSRFGNLTDLNLTKNEIYYIEDGAFMGQS 104

  Fly   256 LCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQINVLTSEIFRGLGNLNVLKLTRNNLNFIGD 320
            ..:.|:|..|.::.|.||:...|.||.||.:.||.|:|:|                        .
 Frog   105 NLQILYLGYNKLTNLSEGMLRGMPRLQFLFVQHNLIDVVT------------------------P 145

  Fly   321 TVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNNLLKKIDNGLLRGTPALLSINVQAN 385
            ..|:|..||..::|..|||:.:......||.||....|                           
 Frog   146 NAFSECLSLISIDLSSNRIKNLDSSTFAGLQTLMVCEL--------------------------- 183

  Fly   386 KLETLTFYTFQPIMDNLVNSTSELLVSDNKFICDCR----LQWIFELKNRTRH---LQLRDSLED 443
                                      :.|.|.|.|.    |:|:....|.||:   ||.....|.
 Frog   184 --------------------------AGNPFHCGCELYGFLEWLVMFNNVTRNFDRLQCETPREF 222

  Fly   444 LHCTLQEPKLSHFVDPVP------------------PTILDVLNI------GGFTAIGSNSA--- 481
            ....|..|:..|..:.:.                  ||.|...::      .||.|....|.   
 Frog   223 TGFPLLSPRPHHSRNAITVLQAHCRNGGHLHLPRERPTSLSADSLHETDESSGFNAGDILSPETT 287

  Fly   482 -------SMGG--------VGNS---VVGSSY--------------------------SGLTMDD 502
                   |.||        .|||   :|...|                          ..:|:|.
 Frog   288 TPTPTPDSSGGPTIDIHHVTGNSATLIVTIPYPFQKLYVLVQYNNSFVYDVTTLKHKKEYITLDK 352

  Fly   503 SRKH----------------------LGSRSRQALRGQRQFASSAENVVESKMR----------- 534
            .:.|                      |.:|    :|.::.||.|........|.           
 Frog   353 LKPHVNYTFCVTSIRFSKRYNHTCLFLATR----IRDEKDFAPSTSTTTHYIMTILGCLFGMVII 413

  Fly   535 -------RRRKRQEEVKEKDLAAVAPAHKRYDYYDDNNGGMSLGHGLDLDDNLSLHKQGFYGAGS 592
                   .|:||.:|.|:|.|......             :.:.:|.|:|..|..|       .|
 Frog   414 LGVVYYCLRKKRMQEEKKKSLNVKKTI-------------LEMRYGSDVDPCLGPH-------SS 458

  Fly   593 PVVGHNDVDV-----LMTSHSASGDALDI-LTTKNAIYIKLFLLKPEMLPCHDELSDPTELPLSR 651
            ..:..:.:.:     |.||.|..|...:. :::|                   :::.....|...
 Frog   459 QKLSEHPIPISCISSLPTSVSGLGSGGEKGMSSK-------------------QINSQMGTPKGT 504

  Fly   652 DLMDVRSNVGQD 663
            :.|:|||..|.|
 Frog   505 NYMEVRSGDGLD 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_001246635.1 LRR_RI <147..291 CDD:238064 32/143 (22%)
LRR_8 183..243 CDD:290566 9/59 (15%)
leucine-rich repeat 185..208 CDD:275380 1/22 (5%)
leucine-rich repeat 209..232 CDD:275380 3/22 (14%)
LRR_RI <225..416 CDD:238064 38/190 (20%)
LRR_8 232..291 CDD:290566 21/58 (36%)
leucine-rich repeat 233..256 CDD:275380 8/22 (36%)
leucine-rich repeat 257..280 CDD:275380 7/22 (32%)
leucine-rich repeat 281..304 CDD:275380 8/22 (36%)
LRR_8 304..363 CDD:290566 13/58 (22%)
leucine-rich repeat 305..328 CDD:275380 2/22 (9%)
leucine-rich repeat 329..352 CDD:275380 7/22 (32%)
LRR_8 352..416 CDD:290566 4/63 (6%)
leucine-rich repeat 353..376 CDD:275380 2/22 (9%)
LRRCT 414..>450 CDD:214507 13/42 (31%)
elfn2NP_001123827.1 LRR_RI <55..188 CDD:238064 42/236 (18%)
leucine-rich repeat 61..81 CDD:275378 4/46 (9%)
LRR_8 81..140 CDD:290566 21/58 (36%)
leucine-rich repeat 82..105 CDD:275378 8/22 (36%)
LRR_4 105..145 CDD:289563 16/63 (25%)
leucine-rich repeat 106..129 CDD:275378 7/22 (32%)
LRR_8 128..188 CDD:290566 23/136 (17%)
leucine-rich repeat 130..153 CDD:275378 10/46 (22%)
leucine-rich repeat 154..167 CDD:275378 5/12 (42%)
TPKR_C2 186..229 CDD:301599 13/42 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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