DRSC/TRiP Functional Genomics Resources

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Protein Alignment Con and flrt1b

DIOPT Version :10

Sequence 1:NP_523930.3 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_073778331.1 Gene:flrt1b / 100144397 ZFINID:ZDB-GENE-080327-6 Length:715 Species:Danio rerio


Alignment Length:626 Identity:151/626 - (24%)
Similarity:233/626 - (37%) Gaps:193/626 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 FVIQNNARLDYIPTMIIEPLKNLSSIVIEYSQVEIVKSYAFANLP-FLER------IILNNNHIM 220
            |:..|:..|..||.:   ||    :..:.|.|...:.:   |.|| .|||      :.|.:|.: 
Zfish    62 FIYCNDRGLTLIPPL---PL----TAAVLYLQNNRIDN---AGLPTSLERRLTVRVVYLYDNEL- 115

  Fly   221 ALDQDAFANHI--RLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNIST--LHEGLFAD--MA 279
                |.|..|:  .||||:|:.|.|..:.|.|...|||.|:|.:::|:|||  :.:..|.:  ..
Zfish   116 ----DDFPTHLPPSLRELHLQDNNIRTLPRSALARLPLLEKLHMDDNSISTVSIEDKAFTNNPRL 176

  Fly   280 RLTFLNLAH-------------------NQINVLTSEIFRGLGNLNVLKLTRNNL--NFIGDTVF 323
            ||.||:..|                   |:|:.:.:..||||.:|..|.|..|.|  ..|.|..|
Zfish   177 RLLFLSRNHLSSIPSGLPASLEELRLDDNRISTIPTHAFRGLSSLRRLFLDGNLLANQRIADDTF 241

  Fly   324 AELWSLSELELDDNRIERISERALDGLNTLKTLNLRNNLLKKIDNGLLRGTPALLSINVQANKLE 388
            :.|.:|:||.|..|.:: .....|..|:.|: |.|::|.:..:..|.|.|...|..:::..|.|.
Zfish   242 SRLSNLTELSLVRNSLQ-APPLNLPSLHLLR-LYLQDNAIAHMPRGSLDGMRRLQKLDISGNNLT 304

  Fly   389 TLTFYTFQPIMDNLVNSTSELLVSDNKFICDCRLQWIFE-----------------LKNRTRHLQ 436
            ||....|:.:     :|.|:|||..|.:.|.|.|:|:.:                 ...|.|.:.
Zfish   305 TLPRGLFKDL-----DSLSQLLVRGNPWYCGCNLRWLHDWLHERGSSVTVRGLTCHAPERLRGMA 364

  Fly   437 LRD---SLEDLHCTLQEPKLSHFVDPVPPTILDVLNIGGFTAIGSNSASMGGVGNSVVGSSYSGL 498
            |||   .|||...|:                               .|:.|.|||.|        
Zfish   365 LRDLSSQLEDCEVTV-------------------------------DAAGGMVGNEV-------- 390

  Fly   499 TMDDSRKHLGSRSRQALRGQRQFASSAENVVESKMRRRRKRQEEVKEKDLAAVAPAHKRYDYYDD 563
                ::|..|....|..      |::...:.:..:...|.|:            |.||..|...|
Zfish   391 ----AKKEKGYFPTQPP------ATTTPPLPQGSLFTLRSRR------------PGHKYSDMGQD 433

  Fly   564 NNGGMSLGHGLDLDDNLSLHKQGF--------YGAGSPV---------VGHNDVDVLMTSHSASG 611
            :.||   |:|. :..:|.:..:..        :.|..||         :|::.....:|.....|
Zfish   434 SLGG---GNGF-VSKSLLISVKPLTPETVHITWQAAQPVPSFRLSWLRLGNSPAMGSITETLVPG 494

  Fly   612 DALDILTTK---NAIYIKLFLLKP-------------------------EMLPCHDELSDPTELP 648
            |..:.|.|:   .:.||  ..|.|                         |...|....:||.|.|
Zfish   495 DRREYLLTQLQPQSSYI--ICLVPLAGNDGKRTSFTATGGLNINTNSEHEHPACAKTETDPLEQP 557

  Fly   649 LSRDLMDVRSNVGQD-MSTAGANSLAQGMTIIVSLVALMMI 688
            :|    |..|:.|.| :|......:..|.|.:|||..:..|
Zfish   558 MS----DQDSDRGTDALSALPLAGIIGGATALVSLFLIFGI 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_523930.3 LRR <157..459 CDD:443914 98/349 (28%)
leucine-rich repeat 185..208 CDD:275380 5/23 (22%)
leucine-rich repeat 209..232 CDD:275380 8/30 (27%)
leucine-rich repeat 233..256 CDD:275380 10/22 (45%)
leucine-rich repeat 257..280 CDD:275380 7/26 (27%)
leucine-rich repeat 281..304 CDD:275380 10/41 (24%)
leucine-rich repeat 305..328 CDD:275380 9/24 (38%)
leucine-rich repeat 329..352 CDD:275380 7/22 (32%)
leucine-rich repeat 353..376 CDD:275380 7/22 (32%)
flrt1bXP_073778331.1 None

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