DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh50 and AMT1;2

DIOPT Version :10

Sequence 1:NP_001369039.1 Gene:Rh50 / 38589 FlyBaseID:FBgn0028699 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_176658.1 Gene:AMT1;2 / 842786 AraportID:AT1G64780 Length:514 Species:Arabidopsis thaliana


Alignment Length:467 Identity:105/467 - (22%)
Similarity:160/467 - (34%) Gaps:129/467 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SGYVVLMIVQIIFLVLFWLFVRYEKT---ALPLAIDAEDAGSANEHVSKYPQFQDIQVMIFIGFG 70
            |.|:| ..:|:.|.:|....||.:.|   .|...:||. ||:.:.::                ||
plant    59 SAYLV-FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA-AGAISYYL----------------FG 105

  Fly    71 FLMTFLRKYGYSATGFT----LFMAALVVQWAVLMKGFLHMEGGKISLSLENIIDADIAAAVPLI 131
            |...|    |..:.||.    .|.|         :..:....|...|..|.....|..||.   |
plant   106 FAFAF----GTPSNGFIGRHHSFFA---------LSSYPERPGSDFSFFLYQWAFAIAAAG---I 154

  Fly   132 SMGALLGRTTPIQLLCMSVFEV-----------------ALFAANEYLALHVFSICDCGGSITVH 179
            :.|::..||..:..|..|.|..                 |..:.::...|......|..||..||
plant   155 TSGSIAERTQFVAYLIYSTFLTGFVYPTVSHWFWSSDGWASASRSDNNLLFGSGAIDFAGSGVVH 219

  Fly   180 AFGAYFGLAVALMLRPASDQ-NETGKLEGASYTSDIFAMIGTTFLWVYWPSFN-----SVLAD-- 236
            ..|...||..||:..|...: :.:|:.......|....::||..||..|..||     ::|..  
plant   220 MVGGIAGLCGALVEGPRIGRFDRSGRSVALRGHSASLVVLGTFLLWFGWYGFNPGSFLTILKGYD 284

  Fly   237 ---------GAGGERAILNTFLSLAAATVTTFVVSALVSHENKLDMVHVQNSTLAGGVAVGTVCN 292
                     .|.|..|:..|.....||..|.|....|..|.|.:|   |.|..|.|..|:.:.| 
plant   285 KSRPYYGQWSAVGRTAVTTTLSGCTAALTTLFSKRLLAGHWNVID---VCNGLLGGFAAITSGC- 345

  Fly   293 LLLGAHGAVLIGIIAGTVSVLGY-------RYLTPWMTANLRLHDTCGVHNLHGMPALISAIASA 350
            .::....|::.|.:|..| ::|:       :|..|...|  :||..||...|             
plant   346 AVVEPWAAIVCGFVASWV-LIGFNLLAKKLKYDDPLEAA--QLHGGCGAWGL------------- 394

  Fly   351 IYASMATVGEYQSELQD------IFPAMVGTNGTETKIMGGLGRNATSQAGYQLFGIAVTLLIAI 409
            |:..:....||.:|:..      :|             |||.|:...:|        .|.:::.:
plant   395 IFTGLFARKEYVNEIYSGDRPYGLF-------------MGGGGKLLAAQ--------IVQIIVIV 438

  Fly   410 GGGILTGAVLKY 421
            |...:|...|.|
plant   439 GWVTVTMGPLFY 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh50NP_001369039.1 Ammonium_transp 55..422 CDD:445985 91/418 (22%)
AMT1;2NP_176658.1 amt 53..479 CDD:273292 105/467 (22%)

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