DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh50 and rhcgb

DIOPT Version :10

Sequence 1:NP_001369039.1 Gene:Rh50 / 38589 FlyBaseID:FBgn0028699 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_073798466.1 Gene:rhcgb / 792274 ZFINID:ZDB-GENE-040426-2595 Length:577 Species:Danio rerio


Alignment Length:483 Identity:204/483 - (42%)
Similarity:292/483 - (60%) Gaps:44/483 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VLMIVQIIFLVLFWLFVR----------YEKTALPLAIDAEDAGSANEHVSKYPQFQDIQVMIFI 67
            |..:.|:..::||.:|||          |:|....:..|.|     |:...:||.|||:.||||:
Zfish   115 VCFVWQVSMIILFGVFVRYNEEADTNWVYKKKEKNITSDIE-----NDFYFRYPSFQDVHVMIFV 174

  Fly    68 GFGFLMTFLRKYGYSATGFTLFMAALVVQWAVLMKGFLHMEG--GKISLSLENIIDADIAAAVPL 130
            |||||||||::|.:.|.||...:||..:|||:||:|:....|  |||.:.:|.:|:||...|..|
Zfish   175 GFGFLMTFLKRYSFGAVGFNFLIAAFGLQWALLMQGWFSPLGDDGKIKIGIEKLINADFCVASCL 239

  Fly   131 ISMGALLGRTTPIQLLCMSVFEVALFAANEYLALHVFSICDCGGSITVHAFGAYFGLAVALML-R 194
            |:.||:||:.:|:|||.|::|.:.|:|..|::.|.|.:..|.|||:.:|.||||:||:::.:| |
Zfish   240 IAYGAVLGKVSPVQLLVMTLFGITLYAVEEFIILSVLNAKDAGGSMVIHTFGAYYGLSISRVLYR 304

  Fly   195 PASDQNETGKLEGASYTSDIFAMIGTTFLWVYWPSFNSVLAD-GAGGERAILNTFLSLAAATVTT 258
            |  :.|::..:.|:.|.||:||||||.|||::||||||.:.: |.|..||.:||:|:||:..:||
Zfish   305 P--NLNKSNHMNGSVYHSDVFAMIGTLFLWMFWPSFNSAICNHGDGQHRAAINTYLALASTVLTT 367

  Fly   259 FVVSALVSHENKLDMVHVQNSTLAGGVAVGTVCNLLLGAHGAVLIGIIAGTVSVLGYRYLTPWMT 323
            ..:|:|.....||||||:|||||||||||||....:|..:|::::|...|.:|.|||.||||::.
Zfish   368 VAISSLFGKTGKLDMVHIQNSTLAGGVAVGTAAEFMLMPYGSLIVGFFCGIISTLGYIYLTPFLE 432

  Fly   324 ANLRLHDTCGVHNLHGMPALISAIASAIYASMATVGEY-QSELQDIFPAMVGTNGTETKIMGGLG 387
            ..|::.||||:||||.||.:|..|..||.|:.|:...| ...|.:|| :..|:|||         
Zfish   433 ERLKIQDTCGIHNLHAMPGVIGGIVGAISAAAASKEVYGDLGLVNIF-SFEGSNGT--------- 487

  Fly   388 RNATSQAGYQLFGIAVTLLIAIGGGILTGAVLKYTNFRNLKKDEH-HQDEHYWEVPAAENKEEYL 451
            |..|.|.|||...:.|.|...||||...|.|||...:.: ..||| ..||.|||||  |::|..:
Zfish   488 RLPTVQGGYQAAALCVALCFGIGGGTFVGLVLKLPIWGD-PADEHCFNDEMYWEVP--EDEESII 549

  Fly   452 --------NMLAKLLDDDAAATNSNSQS 471
                    :|:.....::...||...||
Zfish   550 PPVLSYNNHMIPNNKHEEMRETNFAEQS 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh50NP_001369039.1 Ammonium_transp 55..422 CDD:445985 175/371 (47%)
rhcgbXP_073798466.1 None

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