DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh50 and rhagl

DIOPT Version :9

Sequence 1:NP_001369039.1 Gene:Rh50 / 38589 FlyBaseID:FBgn0028699 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001039257.1 Gene:rhagl / 734123 XenbaseID:XB-GENE-5797751 Length:473 Species:Xenopus tropicalis


Alignment Length:463 Identity:169/463 - (36%)
Similarity:278/463 - (60%) Gaps:14/463 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SPAAKVSGYVVLMIVQIIFLVLFWLFVRYEKTALPLAIDAEDAGSANEH--VSKYPQFQDIQVMI 65
            :|:.:....|:|:::|.|.:.||.:|:.|::  |..|....:...||.|  .:.:|.|:|:|:|:
 Frog     6 NPSVRCQLPVLLLLLQGILIGLFAVFLSYDE--LSSATSLANITVANTHDLDTYFPLFKDVQLML 68

  Fly    66 FIGFGFLMTFLRKYGYSATGFTLFMAALVVQWAVLMKGFL-HMEGGKISLSLENIIDADIAAAVP 129
            |:|.|.|::||:.||:.|....|.:|...:|||||::||. |...|||...|||::.|:.||...
 Frog    69 FVGLGLLLSFLKLYGFGAMALNLVIANFSIQWAVLVQGFFYHYRDGKIHFGLENVMHAEFAAVTA 133

  Fly   130 LISMGALLGRTTPIQLLCMSVFEVALFAANEYLALHVFSICDCGGSITVHAFGAYFGLAVA-LML 193
            |||.||:|||::|:|||.||:.|:.||..|::|..:.|.|.|.||::.:|.|..||||.|: ::.
 Frog   134 LISAGAILGRSSPVQLLLMSMLEIPLFVLNDWLINYYFHIIDIGGTVAIHVFSCYFGLGVSRILY 198

  Fly   194 RPASDQNETGKLEGASYTSDIFAMIGTTFLWVYWPSFNSVLADGA-GGERAILNTFLSLAAATVT 257
            ||......:..:  .:.|:|:.:::|:..||::|||||||||..| ...||:|||||:|:.:|:|
 Frog   199 RPGLRAGHSKNI--TTSTTDLLSLLGSIILWIFWPSFNSVLAKSAEARHRAVLNTFLALSFSTLT 261

  Fly   258 TFVVSALVSHENKLDMVHVQNSTLAGGVAVGTVCNLLLGAHGAVLIGIIAGTVSVLGYRYLTPWM 322
            ||.||:|:....::::||:|||.||||||||...::::...||..:|.||....:||::|::|::
 Frog   262 TFAVSSLMDKRGRINLVHLQNSILAGGVAVGASADMMITPAGASGLGCIAAFSCILGFQYISPFL 326

  Fly   323 TANLRLHDTCGVHNLHGMPALISAIASAIYASMATVGEYQSELQDIFPAMVGTNGTETKIMGGL- 386
            ...|::.|.||:|||||:||:...:.|.:...:..|......|...|...:.. |.|:.|:..: 
 Frog   327 ERKLKVQDQCGIHNLHGLPAIFGTLGSILAILLDRVDTGGHNLHTGFTPDISI-GKESLILDEVE 390

  Fly   387 ---GRNATSQAGYQLFGIAVTLLIAIGGGILTGAVLKYTNFRNLKKDEHHQDEHYWEVPAAENKE 448
               ..|||.||..|...:.||..:::.||.:||.::|.....:...:....|:.|:::|....::
 Frog   391 VNGAWNATDQALNQAAALGVTFGVSLLGGYITGLLIKPPCLVHPSDEMCFDDQPYFQIPIDSEEK 455

  Fly   449 EYLNMLAK 456
            ..||..|:
 Frog   456 WSLNPKAQ 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh50NP_001369039.1 Ammonium_transp 55..422 CDD:413553 149/373 (40%)
rhaglNP_001039257.1 Ammonium_transp 54..443 CDD:383203 149/391 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54631
OrthoDB 1 1.010 - - D311058at33208
OrthoFinder 1 1.000 - - FOG0000589
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11730
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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