DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh50 and Rhag

DIOPT Version :10

Sequence 1:NP_001369039.1 Gene:Rh50 / 38589 FlyBaseID:FBgn0028699 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_075411.2 Gene:Rhag / 65207 RGDID:61871 Length:450 Species:Rattus norvegicus


Alignment Length:465 Identity:187/465 - (40%)
Similarity:274/465 - (58%) Gaps:61/465 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVLMIVQIIFLVLFWLFVRYE-------KTALPLAIDAEDAGSANEHVSK--------------- 54
            ::.:.::::.:|.|.|||.||       |:|.......::| :|.::.|:               
  Rat     7 LIALSLEVVMIVSFALFVEYETSQNGSQKSASQQNASQQNA-AAQQNASQQGNASSPAKEDQFFQ 70

  Fly    55 -YPQFQDIQVMIFIGFGFLMTFLRKYGYSATGFTLFMAALVVQWAVLMKGFLHMEGGKISLSLEN 118
             ||.||.:.||||:|||||||||:|||:|..||.||:|||.:||..:::|.||..|.|....::|
  Rat    71 LYPLFQHVHVMIFVGFGFLMTFLKKYGFSGVGFNLFLAALGLQWGTIVQGLLHSHGLKFPFRIKN 135

  Fly   119 IIDADIAAAVPLISMGALLGRTTPIQLLCMSVFEVALFAANEYLALHVFSICDCGGSITVHAFGA 183
            :|:||.:.|..|||.||:||:|:|||::.|::.|:|:||.||:|...:|...|.|.|:|:|||||
  Rat   136 MINADFSTATVLISFGAVLGKTSPIQMIIMTILEIAVFAGNEHLVTEIFKASDTGASMTIHAFGA 200

  Fly   184 YFGLAVA-LMLRPASDQNETGKLEGASYTSDIFAMIGTTFLWVYWPSFNSVLADGAGGE-RAILN 246
            ||||||| ::.|.........  |.:.|.||:||||||.|||::||||||.:|.....: |||:|
  Rat   201 YFGLAVAGVLYRSGLKHGHPN--EESVYHSDLFAMIGTLFLWMFWPSFNSAIAQPENNQYRAIVN 263

  Fly   247 TFLSLAAATVTTFVVSALVSHENKLDMVHVQNSTLAGGVAVGTVCNLLLGAHGAVLIGIIAGTVS 311
            |::||||..:|.:.:|:||....:|||||:||:||||||||||..::.:..:.|:.||.|||.:|
  Rat   264 TYMSLAACVITAYALSSLVERRGRLDMVHIQNATLAGGVAVGTCADMEIPLYFAMTIGSIAGIIS 328

  Fly   312 VLGYRYLTPWMTANLRLHDTCGVHNLHGMPALISAIASAIYASMATVGEYQSELQDIFPAMVGTN 376
            ||||::|:|.:...|.:|||||||||||:|.:...:||.:..|.                     
  Rat   329 VLGYKFLSPLLAHKLMIHDTCGVHNLHGLPGVFGGLASIVAISW--------------------- 372

  Fly   377 GTETKIMGGLGRNATSQAGYQLFGIAVTLLIAIGGGILTGAVLKYTNFRNLKKDEH-HQDEHYWE 440
                      |::..|....|...:..::..||.||::||.:||...: |...||: ..|...|:
  Rat   373 ----------GKSTVSTMAMQATALGSSIGSAIVGGLVTGLILKLPVW-NQPPDEYCFDDSVSWK 426

  Fly   441 VPAAENKEEY 450
            ||.....:.|
  Rat   427 VPKYRELDNY 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh50NP_001369039.1 Ammonium_transp 55..422 CDD:445985 167/368 (45%)
RhagNP_075411.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..61 5/27 (19%)
Ammonium_transp 71..422 CDD:445985 170/384 (44%)

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