DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh50 and RHBG

DIOPT Version :9

Sequence 1:NP_001369039.1 Gene:Rh50 / 38589 FlyBaseID:FBgn0028699 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_065140.3 Gene:RHBG / 57127 HGNCID:14572 Length:458 Species:Homo sapiens


Alignment Length:459 Identity:205/459 - (44%)
Similarity:297/459 - (64%) Gaps:23/459 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHSPAAKVSGYVVLMIVQIIFL-----VLFWLFVRY-EKTALPLAIDAEDAGSANEHVSKYPQFQ 59
            |....::.:|..:.:.:..:||     |||.:|||| .||...|...:..:.:.||...:||.||
Human     1 MAGSPSRAAGRRLQLPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFRYPSFQ 65

  Fly    60 DIQVMIFIGFGFLMTFLRKYGYSATGFTLFMAALVVQWAVLMKGFLH-MEGGKISLSLENIIDAD 123
            |:..|:|:||||||.||::||:|:.|||..:||..:||:.|::|||| ..||.|.:.:|::|:||
Human    66 DVHAMVFVGFGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMINAD 130

  Fly   124 IAAAVPLISMGALLGRTTPIQLLCMSVFEVALFAANEYLALHVFSICDCGGSITVHAFGAYFGLA 188
            ..|...|||.||:||:|.|.|||.|::.||.||..||::.||:..:.|.|||:|:|.|||||||.
Human   131 FCAGAVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTFGAYFGLV 195

  Fly   189 VALML-RPASDQNETGKLEGASYTSDIFAMIGTTFLWVYWPSFNSVL-ADGAGGERAILNTFLSL 251
            ::.:| ||..::::  ..:|:.|.||:||||||.|||::|||||:.| |.|||..|..|||:.||
Human   196 LSRVLYRPQLEKSK--HRQGSVYHSDLFAMIGTIFLWIFWPSFNAALTALGAGQHRTALNTYYSL 258

  Fly   252 AAATVTTFVVSALVSHENKLDMVHVQNSTLAGGVAVGTVCNLLLGAHGAVLIGIIAGTVSVLGYR 316
            ||:|:.||.:||||..:.:|||||:||:.|||||.|||...::|...||:..|.:|||||.|||:
Human   259 AASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGALAAGFLAGTVSTLGYK 323

  Fly   317 YLTPWMTANLRLHDTCGVHNLHGMPALISAIASAIYASMATVGEYQSELQDIFPAMVGTNGTETK 381
            :.||.:.:..::.||||||||||||.::.|:...:.|.:||...|...|:.:||.:....     
Human   324 FFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVAGLATHEAYGDGLESVFPLIAEGQ----- 383

  Fly   382 IMGGLGRNATSQAGYQLFGIAVTLLIAIGGGILTGAVLKYTNFRNLKKDEHHQDEHYWEVPAA-E 445
                  |:|||||.:||||:.|||:.|..||.|.|.:||.....:....:|::|:.:|:||.. |
Human   384 ------RSATSQAMHQLFGLFVTLMFASVGGGLGGLLLKLPFLDSPPDSQHYEDQVHWQVPGEHE 442

  Fly   446 NKEE 449
            :|.:
Human   443 DKAQ 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh50NP_001369039.1 Ammonium_transp 55..422 CDD:413553 182/369 (49%)
RHBGNP_065140.3 Ammonium_transp 61..360 CDD:275788 155/300 (52%)
Interaction with ANK3. /evidence=ECO:0000269|PubMed:15611082 416..424 1/7 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159976
Domainoid 1 1.000 375 1.000 Domainoid score I876
eggNOG 1 0.900 - - E1_KOG3796
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9469
Inparanoid 1 1.050 376 1.000 Inparanoid score I2098
Isobase 1 0.950 - 0 Normalized mean entropy S2906
OMA 1 1.010 - - QHG54631
OrthoDB 1 1.010 - - D311058at33208
OrthoFinder 1 1.000 - - FOG0000589
OrthoInspector 1 1.000 - - otm40435
orthoMCL 1 0.900 - - OOG6_101421
Panther 1 1.100 - - LDO PTHR11730
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5299
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1615.790

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