DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh50 and rhcgl1

DIOPT Version :9

Sequence 1:NP_001369039.1 Gene:Rh50 / 38589 FlyBaseID:FBgn0028699 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001103313.1 Gene:rhcgl1 / 563826 ZFINID:ZDB-GENE-060209-2 Length:471 Species:Danio rerio


Alignment Length:451 Identity:190/451 - (42%)
Similarity:280/451 - (62%) Gaps:22/451 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVSGYVVLMIVQIIFLVLFWLFVRYEKTALPLAIDAEDAGS-----ANEHVSKYPQFQDIQVMIF 66
            ::|...|..:.||..::||.:|:||.:.:....|:.....:     .|:...:||.|||:.||||
Zfish     8 RISLPAVCFVWQIAMIILFGVFIRYNEESDSHWIETRKKNNISTDLENDFYYRYPSFQDVHVMIF 72

  Fly    67 IGFGFLMTFLRKYGYSATGFTLFMAALVVQWAVLMKGFLH---MEGGKISLSLENIIDADIAAAV 128
            :|||||||||::|.:.:.||...:||..:|||:||:|:.|   .|..||.:.:||:|:||...|.
Zfish    73 VGFGFLMTFLKRYSFGSVGFNFPIAAFGIQWALLMQGWFHSFDKEDLKIKIGVENLINADFCVAG 137

  Fly   129 PLISMGALLGRTTPIQLLCMSVFEVALFAANEYLALHVFSICDCGGSITVHAFGAYFGLAVALML 193
            .||:.||.||:.:|:||:.:::|.|.|:|..||:.|.:..:.|.|||:.:|.||||:||.::.:|
Zfish   138 CLIAYGACLGKVSPVQLMVLTLFGVTLYAVEEYIILDLLHVRDAGGSMVIHTFGAYYGLTISWVL 202

  Fly   194 -RPASDQNETGKLEGASYTSDIFAMIGTTFLWVYWPSFNSVLAD-GAGGERAILNTFLSLAAATV 256
             ||...|  :..|:.:.|.||:||||||.|||::||||||.:|| |.|..||.:||:|||||:.:
Zfish   203 YRPFLSQ--SNHLQRSVYHSDVFAMIGTLFLWMFWPSFNSAIADHGDGQHRAAINTYLSLAASVL 265

  Fly   257 TTFVVSALVSHENKLDMVHVQNSTLAGGVAVGTVCNLLLGAHGAVLIGIIAGTVSVLGYRYLTPW 321
            |||.:|:|.....||||||:||:|||||||:||....::..:|::::|..:|.||.:||.:|||.
Zfish   266 TTFALSSLSKKYGKLDMVHIQNATLAGGVAMGTASEFMITPYGSLIVGFCSGIVSTVGYVFLTPL 330

  Fly   322 MTANLRLHDTCGVHNLHGMPALISAIASAIYASMATVGEYQSELQDIFPAMVGTNGTETKIMGGL 386
            |...|::.|||||||||.||.:|..|..|:.|:.|:...|..|      .::...|.|.|:    
Zfish   331 MEKTLKIQDTCGVHNLHAMPGVIGGIVGAVTAACASESVYGHE------GLINMFGFEGKV---- 385

  Fly   387 GRNATSQAGYQLFGIAVTLLIAIGGGILTGAVLKYTNFRNLKKDEHHQDEHYWEVPAAENK 447
            .|.|:.|.|||..||.|.:...:.||.|.|.:||...:.:........|:.|||||..|::
Zfish   386 NRTASVQGGYQAAGIFVAIAFGLVGGALVGGILKLPIWGDPTDSNCFDDDIYWEVPEEEDE 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh50NP_001369039.1 Ammonium_transp 55..422 CDD:413553 172/371 (46%)
rhcgl1NP_001103313.1 Ammonium_transp 43..420 CDD:275788 172/388 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596267
Domainoid 1 1.000 362 1.000 Domainoid score I902
eggNOG 1 0.900 - - E1_KOG3796
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 383 1.000 Inparanoid score I2002
OMA 1 1.010 - - QHG54631
OrthoDB 1 1.010 - - D311058at33208
OrthoFinder 1 1.000 - - FOG0000589
OrthoInspector 1 1.000 - - otm24460
orthoMCL 1 0.900 - - OOG6_101421
Panther 1 1.100 - - O PTHR11730
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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