DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh50 and RHCG

DIOPT Version :9

Sequence 1:NP_001369039.1 Gene:Rh50 / 38589 FlyBaseID:FBgn0028699 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001307970.1 Gene:RHCG / 51458 HGNCID:18140 Length:479 Species:Homo sapiens


Alignment Length:452 Identity:195/452 - (43%)
Similarity:292/452 - (64%) Gaps:35/452 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MIVQIIFLVLFWLFVRY----------EKTALPLAIDAEDAGSANEHVSKYPQFQDIQVMIFIGF 69
            :::|:|.::||.:||||          |:|...|: |.|     ||...:||.|||:.||:|:||
Human    16 LLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLS-DME-----NEFYYRYPSFQDVHVMVFVGF 74

  Fly    70 GFLMTFLRKYGYSATGFTLFMAALVVQWAVLMKGFLH-MEGGKISLSLENIIDADIAAAVPLISM 133
            |||||||::||:||.||...:||..:|||:||:|:.| ::...|.:.:||:|:||...|...::.
Human    75 GFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENLINADFCVASVCVAF 139

  Fly   134 GALLGRTTPIQLLCMSVFEVALFAANEYLALHVFSICDCGGSITVHAFGAYFGLAVA-LMLRPAS 197
            ||:||:.:|||||.|:.|:|.|||.||::.|::..:.|.|||:|:|.|||||||.|. ::.|...
Human   140 GAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGGSMTIHTFGAYFGLTVTRILYRRNL 204

  Fly   198 DQNETGKLEGASYTSDIFAMIGTTFLWVYWPSFNSVLA-DGAGGERAILNTFLSLAAATVTTFVV 261
            :|::  :.:.:.|.||:||||||.|||:|||||||.:: .|....||.:||:.||||..:|:..:
Human   205 EQSK--ERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQHRAAINTYCSLAACVLTSVAI 267

  Fly   262 SALVSHENKLDMVHVQNSTLAGGVAVGTVCNLLLGAHGAVLIGIIAGTVSVLGYRYLTPWMTANL 326
            |:.:..:.||||||:||:||||||||||...::|..:||::||.:.|.:|.||:.||||::.:.|
Human   268 SSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGALIIGFVCGIISTLGFVYLTPFLESRL 332

  Fly   327 RLHDTCGVHNLHGMPALISAIASAIYASMATVGEYQSE-LQDIFPAMVGTNGTETKIMGGLGRNA 390
            .:.||||::||||:|.:|..|..|:.|:.|::..|..| |...|. ..|.||..|         |
Human   333 HIQDTCGINNLHGIPGIIGGIVGAVTAASASLEVYGKEGLVHSFD-FQGFNGDWT---------A 387

  Fly   391 TSQAGYQLFGIAVTLLIAIGGGILTGAVLKYTNFRNLKKDEH-HQDEHYWEVPAAENKEEYL 451
            .:|..:|::|:.|||.:|:.|||:.|.:|:.. |.....||: .:|..|||:|.. |...|:
Human   388 RTQGKFQIYGLLVTLAMALMGGIIVGLILRLP-FWGQPSDENCFEDAVYWEMPEG-NSTVYI 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh50NP_001369039.1 Ammonium_transp 55..422 CDD:413553 170/370 (46%)
RHCGNP_001307970.1 Ammonium_transp 60..435 CDD:322161 174/387 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159975
Domainoid 1 1.000 375 1.000 Domainoid score I876
eggNOG 1 0.900 - - E1_KOG3796
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 376 1.000 Inparanoid score I2098
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54631
OrthoDB 1 1.010 - - D311058at33208
OrthoFinder 1 1.000 - - FOG0000589
OrthoInspector 1 1.000 - - otm40435
orthoMCL 1 0.900 - - OOG6_101421
Panther 1 1.100 - - O PTHR11730
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.770

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