DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh50 and Rhag

DIOPT Version :9

Sequence 1:NP_001369039.1 Gene:Rh50 / 38589 FlyBaseID:FBgn0028699 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_035399.1 Gene:Rhag / 19743 MGIID:1202713 Length:438 Species:Mus musculus


Alignment Length:448 Identity:192/448 - (42%)
Similarity:268/448 - (59%) Gaps:65/448 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VQIIFLVLFWLFVRYE-------KTALPLAIDAEDAGSANEHVSK------YPQFQDIQVMIFIG 68
            :::..:|||.|||.||       |.|...  :|...|:.:....|      ||.|||:.||||:|
Mouse    12 LEVAMIVLFGLFVEYETPQNASQKNASHQ--NASQQGNTSSSAKKDQFFQLYPLFQDVHVMIFVG 74

  Fly    69 FGFLMTFLRKYGYSATGFTLFMAALVVQWAVLMKGFLHMEGGKISLSLENIIDADIAAAVPLISM 133
            ||||||||:|||:|..||.||:|||.:||..:|:|.||..|.:....:.|:|:||.:.|..|||.
Mouse    75 FGFLMTFLKKYGFSGVGFNLFLAALGLQWGTIMQGLLHSHGKEFHFGIYNMINADFSTATVLISF 139

  Fly   134 GALLGRTTPIQLLCMSVFEVALFAANEYLALHVFSICDCGGSITVHAFGAYFGLAVA-LMLRPA- 196
            ||:||:|:|||:|.|::.|:|:||.||||...:|...|.|.|:|:|||||||||||| ::.||. 
Mouse   140 GAVLGKTSPIQMLIMTILEIAVFAGNEYLVTELFEASDTGASMTIHAFGAYFGLAVAGVLYRPGL 204

  Fly   197 -----SDQNETGKLEGASYTSDIFAMIGTTFLWVYWPSFNSVLAD-GAGGERAILNTFLSLAAAT 255
                 :|:        :.|.||:||||||.|||::||||||.:|| |....|||:||::||||..
Mouse   205 RCEHPNDE--------SVYHSDLFAMIGTLFLWIFWPSFNSAIADPGDHQYRAIVNTYMSLAACV 261

  Fly   256 VTTFVVSALVSHENKLDMVHVQNSTLAGGVAVGTVCNLLLGAHGAVLIGIIAGTVSVLGYRYLTP 320
            :|.:.:|:||....:|||||:||:||||||||||..::.:..:.|:.||.|||.:|||||::.:|
Mouse   262 ITAYALSSLVERRGRLDMVHIQNATLAGGVAVGTCADMEIPLYAAMTIGSIAGIISVLGYKFFSP 326

  Fly   321 WMTANLRLHDTCGVHNLHGMPALISAIASAIYASMATVGEYQSELQDIFPAMVGTNGTETKIMGG 385
            .:...|.:|||||||||||:|.:...:||.:..|...                            
Mouse   327 LLANKLMIHDTCGVHNLHGLPGVFGGLASIVAISWGM---------------------------- 363

  Fly   386 LGRNATSQAGYQLFGIAVTLLIAIGGGILTGAVLKYTNFRNLKKDEH-HQDEHYWEVP 442
                :|:....|...:..::..||.||:|||.:||...: |...||: :.|...|:||
Mouse   364 ----STASMAMQAAALGSSIGSAIVGGLLTGLILKLPIW-NQPPDEYCYDDSVSWKVP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh50NP_001369039.1 Ammonium_transp 55..422 CDD:413553 172/374 (46%)
RhagNP_035399.1 Ammonium_transp 15..410 CDD:250217 188/437 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850346
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3796
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54631
OrthoDB 1 1.010 - - D311058at33208
OrthoFinder 1 1.000 - - FOG0000589
OrthoInspector 1 1.000 - - otm42513
orthoMCL 1 0.900 - - OOG6_101421
Panther 1 1.100 - - O PTHR11730
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5299
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.750

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