DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh50 and rhr-1

DIOPT Version :9

Sequence 1:NP_001369039.1 Gene:Rh50 / 38589 FlyBaseID:FBgn0028699 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001370490.1 Gene:rhr-1 / 178927 WormBaseID:WBGene00004358 Length:463 Species:Caenorhabditis elegans


Alignment Length:446 Identity:197/446 - (44%)
Similarity:282/446 - (63%) Gaps:16/446 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHSPAAKVSGYVVLMIVQIIFLVLFWLFVRYEKTALPLAIDAEDAGSANEHVSKYPQFQDIQVMI 65
            |.||..:....::|.:.|::|||:|.|:..|:.:|||  .:.::...|....:.||.|||..|||
 Worm     1 MRSPLHQNQLTLILGLFQVVFLVIFALYGSYDASALP--SETKNVEEAARMTNLYPLFQDTHVMI 63

  Fly    66 FIGFGFLMTFLRKYGYSATGFTLFMAALVVQWAVLMKGFLHMEGG-KISLSLENIIDADIAAAVP 129
            |||||||||||::||:||....:.:|...:||.::::|......| |.::|||.::.||.||||.
 Worm    64 FIGFGFLMTFLKRYGFSAVSINMLLAVFTIQWGIIVRGMASAHHGFKFTISLEQLLTADFAAAVI 128

  Fly   130 LISMGALLGRTTPIQLLCMSVFEVALFAANEYLALHVFSICDCGGSITVHAFGAYFGLAVALMLR 194
            ||||||:||:.:|.|.:.|:.||..:....|::.:|...|.|.||||.|||||||||||.|....
 Worm   129 LISMGAMLGKLSPSQYVIMAFFETPVALIVEHICVHNLQINDVGGSIIVHAFGAYFGLACAKGFG 193

  Fly   195 PASDQNETGKLEGASYTSDIFAMIGTTFLWVYWPSFNSVLA--DGAGGERAILNTFLSLAAATVT 257
            ....:..|.  ||::|.:|||||||..|||:||||||:.:|  |.| .:||:.||||||.|.|:|
 Worm   194 KKEQRGHTN--EGSTYHTDIFAMIGAIFLWIYWPSFNAAVAATDDA-RQRAVANTFLSLCACTMT 255

  Fly   258 TFVVSALVSHENKLDMVHVQNSTLAGGVAVGTVCNLLLGAHGAVLIGIIAGTVSVLGYRYLTPWM 322
            ||:||..|....:.||||:.|||||||||:||..|::|..:.|::||:|||.|||:||:|:||::
 Worm   256 TFLVSQAVDKHKRFDMVHIANSTLAGGVAIGTTANVVLEPYHAMIIGVIAGAVSVIGYKYITPFL 320

  Fly   323 TANLRLHDTCGVHNLHGMPALISAIASAIYASMATVGEYQSELQDIFPAMVGTNGTE-TKIMGGL 386
            :..|.:||||||:||||||.||:..||..:..:.....|.::...|:|.|  ..|.: |::.   
 Worm   321 SEKLGIHDTCGVNNLHGMPGLIAGFASIAFLFIYDETRYPAQYDKIYPGM--ARGEDRTRMF--- 380

  Fly   387 GRNATSQAGYQLFGIAVTLLIAIGGGILTGAVLKYTNFRNLKKDEHHQDEHYWEVP 442
              :..:||..||..|.:..|.:...|.|||.:||...:..::.||::.|..|:|.|
 Worm   381 --DEKTQALNQLMAIGLVFLASTVSGYLTGLLLKLKIWDQVRDDEYYADGDYFETP 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh50NP_001369039.1 Ammonium_transp 55..422 CDD:413553 176/370 (48%)
rhr-1NP_001370490.1 Ammonium_transp 20..430 CDD:395729 189/421 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167501
Domainoid 1 1.000 349 1.000 Domainoid score I542
eggNOG 1 0.900 - - E1_KOG3796
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 366 1.000 Inparanoid score I1256
Isobase 1 0.950 - 0 Normalized mean entropy S2906
OMA 1 1.010 - - QHG54631
OrthoDB 1 1.010 - - D311058at33208
OrthoFinder 1 1.000 - - FOG0000589
OrthoInspector 1 1.000 - - otm14573
orthoMCL 1 0.900 - - OOG6_101421
Panther 1 1.100 - - LDO PTHR11730
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5299
SonicParanoid 1 1.000 - - X200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.790

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