DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnah3 and CG14651

DIOPT Version :9

Sequence 1:NP_647937.2 Gene:Dnah3 / 38586 FlyBaseID:FBgn0035581 Length:4385 Species:Drosophila melanogaster
Sequence 2:NP_649475.3 Gene:CG14651 / 40568 FlyBaseID:FBgn0037254 Length:1079 Species:Drosophila melanogaster


Alignment Length:1156 Identity:217/1156 - (18%)
Similarity:379/1156 - (32%) Gaps:421/1156 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 PDDQKIKMLAKYRVELARAEKLFTLKIQKRYQCLLKSMSIVQLATYPSHLIRKAFRRINPRSALL 412
            |||.:.|         ..|||..         |::.......:..|....|        ||:. |
  Fly    31 PDDSQFK---------REAEKAI---------CIMPPRPGTTMMNYQELYI--------PRNQ-L 68

  Fly   413 QDAYQFIVKEKRDW---------------PKLPPEVILMDYLFVGDRGVRQDLAILIIVCLIDLQ 462
            .|.| :.::|.:.|               |.:.|:||...|  |..|.:.:|         :::.
  Fly    69 TDVY-YPIQEAQRWLTLMDKMGKAHRFPLPTILPKVIQTRY--VPKRHLPKD---------VEVD 121

  Fly   463 EDFRHYVKRSFLNYLLSSNMERRRLQLERE----------PPEFPI-------LTISPPVSWRSN 510
            ...|.|.|.:.:|.|..:.:....||...|          |.:||:       ..|:.|.:|...
  Fly   122 RRRRQYQKINLVNELAKAGLTDDVLQPTEEQYNVMSEFAFPHKFPLSYFDDSNFDINSPAAWFEL 186

  Fly   511 LLRGKARIGEVLMTTHPTVQA-LNRLW-----------HDLYEDLVVVD--------LGQLLLAQ 555
            .:.|.|..........|..|: ||..|           .||:..|.:.|        |..:.:|:
  Fly   187 GVVGDAHYPLPAKAYLPYNQSLLNCQWGMAAVTAHHEDSDLWTLLSLEDGCTYTVPKLQFMFMAE 251

  Fly   556 RPLDADTVQVFIEKSCADVRD------LLLNDWLPRCADLMNEMRGTWKDLVPMSGKYGGRAAML 614
            .|      ..:|::..|.|.:      |:|.:.:..|. |..::..|              ....
  Fly   252 DP------HKYIKRLQAAVHERHKGEQLMLMELIVDCV-LHEDIEST--------------VFYS 295

  Fly   615 FRCIHSAM-----SRHLNSLISKSINYLFKVLCA-----------------FKGGNRIE----KY 653
            |:.|.|.:     |......:...:|.:|:.|.|                 |:..|..|    .:
  Fly   296 FKPIESVLQAAKVSEQCKRRLRSEVNLVFERLMALYELEQFILKMPKEFPQFRNINLKEFLPRSF 360

  Fly   654 SMFDAKLKRIPLMTLIASVVGAHFDHEPINM----GPGVRPASNIYVYDEDDADPFQQPQVNQFV 714
            ::..:..:|:.|..|..::....:|:...::    | |:...:.:.:             ..|::
  Fly   361 AVDVSGKERLELQALGITMQEKRYDYLKASLFYCVG-GIEAMAGVAI-------------ECQYI 411

  Fly   715 ENVP----------DIDDVAQFELDHSNK----LYIYPYMQELPRIFTEHFKS------------ 753
            |.:.          .:.|..|.:..||:.    |.:| :.|:|..:.|...::            
  Fly   412 ETLSIFICSFSKPLALVDFLQAQEAHSDNVATFLKVY-WPQQLTTVITVVLRALGKGWLDISLNT 475

  Fly   754 ------------ILAVGYEIPR-LEFVMSGGEPETKGFLHFIDEDHVDFLELCEKVEQIVKVNWQ 805
                        ||.|.:.:.. :|.::   |.....|.||:.:..:.||||        |.|::
  Fly   476 WTVYLMCKISRFILQVKFRMQESMEVLL---ETSLMNFSHFVCDPCLQFLEL--------KSNYK 529

  Fly   806 GVHVYL-------KPVYKYYFGLFQKLILPMVQKVWTENNLPEL--GAVQELLKK-------LQA 854
            ..:.|:       |||:....|:.:.      :||:...:..|.  |.| |:.||       ::.
  Fly   530 WTNNYIDTEFPFQKPVFAMTLGISED------RKVFYSTDPDEFQPGLV-EIFKKCLEKSSGVRC 587

  Fly   855 VSDTTYYLRDFIPLNLFML-----------DNRHVK-------LSLRMYVREIYDFIIDFYKALN 901
            :..:......|.| ||::|           :|..:|       |.||.|.| :|:..|||| .||
  Fly   588 IDGSVMSFLKFAP-NLYILTVELIEDRFLRENELLKNCYAKAVLPLRAYAR-LYERFIDFY-LLN 649

  Fly   902 WN---------------------ENRAICEELEEM---------------SMKA----------- 919
            .|                     ||:.:.|||.|:               :||.           
  Fly   650 VNTYMQAYAQAHKPSSEVKRDILENKRLKEELREILPAFITIGPFYINVDTMKQFMIKKRIEVVR 714

  Fly   920 ------GERPEETPEVV---ALQNY---------INDCREMRIFA-----IKDEIKNVLKRVVFL 961
                  .:|..||.||:   .|:.:         |....|:|.||     :.||:|..::  |..
  Fly   715 RIFEYYVDRMYETNEVLLDRCLEMFRRIAERPISIEHLYEIRDFAQTVPDLVDELKADIQ--VMW 777

  Fly   962 LTHTYLSSDELHLNSRTFILPGELEEVLDLSAARLAVVRDNLELALRERRMEFEKLLAQEKRTMD 1026
            |.:..|.|...:|:...|.:...:.........||:.::|       |::::.|..|........
  Fly   778 LEYDLLDSFFYNLSDHQFAMKWNVYAWPHQIMVRLSTLKD-------EQKVDIEDFLRLHASECQ 835

  Fly  1027 GFRIREIRDVLTLEELKERVDTVDLLFTT----------------IENLSREAKAINTEETLLQI 1075
            .|..|       ||.|.:.|....|.|.|                |:.|.:.::.:...:.|.::
  Fly   836 AFEER-------LESLNDEVQAYSLAFNTNRAQETSVDIKKTWALIKELEKVSQTLQFRQELFEL 893

  Fly  1076 DVSAFPLLAEIIEKMEPIEKLWKTSYEFEKDYLIWMFERFECLNADGVREQVENMHKIMYKLSRQ 1140
            :..:...|..||....|.:.||                 :.|.|              ..||...
  Fly   894 EPLSVEFLESIIASFTPYKNLW-----------------YGCAN--------------FLKLEDA 927

  Fly  1141 LAYNPVAKRAAEQ-----MRMK-----------------------IEKFRVYLPVLDSICRHGLE 1177
            ...||:|:...|.     ||::                       |.|...::||.:||.....|
  Fly   928 TLGNPIAQLDLEDVWNNLMRLRDELNESMKIFHEKVEIMDVAKTFIAKIDDFVPVYNSIKDIRNE 992

  Fly  1178 K---RHWDQISKILGRKVNPKLFPTLKDMIDVDIMSILPQLEEIANAAGKE 1225
            .   .||.::|.|.|:::...:....:.:|...|:.:||::..|:..|..|
  Fly   993 NWMYIHWQELSAITGQEIKYSVAMNYQYLIRKGILDVLPEVHIISEKANNE 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnah3NP_647937.2 DHC_N2 1086..1489 CDD:285579 34/171 (20%)
P-loop_NTPase 1620..1847 CDD:304359
P-loop_NTPase 1934..2079 CDD:304359
P-loop_NTPase 2264..2522 CDD:304359
P-loop_NTPase 2613..2916 CDD:304359
MT 2929..3272 CDD:289543
AAA_9 3304..3519 CDD:289547
Dynein_heavy 3659..4373 CDD:281078
CG14651NP_649475.3 DHC_N2 904..>1042 CDD:285579 33/168 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450625
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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