DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnah3 and CG9068

DIOPT Version :9

Sequence 1:NP_647937.2 Gene:Dnah3 / 38586 FlyBaseID:FBgn0035581 Length:4385 Species:Drosophila melanogaster
Sequence 2:NP_611111.1 Gene:CG9068 / 36817 FlyBaseID:FBgn0034106 Length:1227 Species:Drosophila melanogaster


Alignment Length:1411 Identity:251/1411 - (17%)
Similarity:474/1411 - (33%) Gaps:466/1411 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   970 DELHLNSRTFILPGELEEVLDLSAARLAV--VRDNLE--LALRERRMEFEKLLAQEKRTMDGFRI 1030
            ||::..:.|..:.|.|.|:||    ||.|  .|:.||  ..:|.|...          :||.|  
  Fly   128 DEINFGTLTSDVDGCLMELLD----RLYVPFFRNYLEWNATVRNRFCS----------SMDRF-- 176

  Fly  1031 REIRDVLTLEELKERVDTVDLLFT--TIENLSREAKAINTEETLLQIDVSAFPLLAEIIEKMEPI 1093
                 :..|..:..::..:.:::.  .|:.|                  :|.|:...::..:|.|
  Fly   177 -----LAFLSGMHHQISGMSVMYVPFVIKEL------------------TAGPVDRYLVGSLEGI 218

  Fly  1094 EKLWKTSY--------------------EFEKDYLIWMFERFECLNADGVREQV--ENMHKIMYK 1136
            ...|.|..                    |||    .|.: |:|.|  .|:.:|:  .::.|::..
  Fly   219 ALYWTTQIRTLLADDTLTVPHDLVTVRDEFE----FWEY-RYEVL--QGINDQLAHSDVQKVLLL 276

  Fly  1137 L-SRQLAYNP----VAKRAAEQMRMKIEKFRVYLPVLDSICRHGLEKRHWDQISKILGRKVNPKL 1196
            | :.|..:.|    :.:||.:::...:...: ||.:|...|                 .|::...
  Fly   277 LHNAQSVHMPQMDGLIERARKELHKSLSNIK-YLHLLIEPC-----------------SKIDAAT 323

  Fly  1197 FPTLKDMIDVDIMSILPQLEEIANAAGKEYDLNNGLRIMQADWRDVMFEVLQYRDSDTHILASLD 1261
            .|       .|:..:||::..:........:..|..|::.|.:|::..:::::....|.:...|.
  Fly   324 SP-------ADLTKLLPRIIHLIRFIWLNSEYYNTTRLIAALFRNLSNQIIRFCTKQTKVEEILS 381

  Fly  1262 D------------IQTLLD-----DHIMRTQAMKRSPFITALGSKADDWEARLLLIQNIIDAWTQ 1309
            .            |:..|.     |.|.|..|.|.:..         .||....||.|.|||   
  Fly   382 GKPRFGIRICNVAIECCLTYRGIYDTISRDLAQKHTQM---------PWELDEGLIFNHIDA--- 434

  Fly  1310 VQITWMYLEPIFSSEDIMRQMPLEGRNFKAVDKLWRKIMKHTLKDRHVMAATEYPEMLEVFTKAI 1374
                  ::|.:....||...|.:.||           :.::....:.|...| ..|.||...:::
  Fly   435 ------FVERLNDVIDICESMIVFGR-----------LDENGSIPKPVFGGT-CGEELEKIAESV 481

  Fly  1375 E--DLETVTKGLNTYLEQKRLFFARFFFLSNDELLEILSETK-----DPMRVQPHLRKCFEGIGS 1432
            |  .|:|:.|                  |..:....||:..:     |....:.:::|..|.:..
  Fly   482 EVQFLDTLNK------------------LQQNSQAYILNVHRADWYADVAGFRKNMQKLEETVQR 528

  Fly  1433 LTFDDNMEIVEMVSDEEERV--------------ALVRKINPQLANGLVEMWLKEVEMVMLDSVK 1483
            |.|:    :.:.||:.||.:              ..:||...:..:.|..|:.||::......::
  Fly   529 LIFN----VFQQVSNVEEMLEALQAMLFYSYRQRGTLRKTYLKETSKLWRMFSKEMDATSRKLLE 589

  Fly  1484 EQMREAWED--------YAM-VERISWVVSWPGQVVQGISCMAWTYEVEEAIETKE-LPAYLEKS 1538
            ||.||:|..        |.: :||::|                    :.:.::..| ||| :::|
  Fly   590 EQSRESWLSKHVSIALGYRINLERLTW--------------------LRDRLKNSEWLPA-VKES 633

  Fly  1539 NLQIADLVQLVRTDLQAGVRIAVEALI---------VLDVHDRDVV------KYLTDCRI----- 1583
            :..:|.. ..:|.:.|..:|:|.:..:         :....||.:|      |.|.:|.|     
  Fly   634 SPALAKF-DALRHEFQKEIRLAYDDWVAKCCGFSGDLCQRLDRYLVVRSKKFKGLLECNIDASVL 697

  Fly  1584 ---TNIQDFDWI------SQLRYYWKVNEKNEDWVCVSMVVTDVEYGMEYLGNLPRLVVTPLTDR 1639
               ...|.|:.:      :..:.|.:.:.....:..:..:.......:..|.:..|.:..||...
  Fly   698 ELCEQAQHFERMGFAIPSTMKKLYERYDTIRSLYNGIIKLALSHNRILAVLSDRERKLFRPLIQA 762

  Fly  1640 CYRTLM-GALKLCLGGAPEGPAGTGKTETCKDLAKAV-----AKKCVVFNCSDGLDYKALGKFFK 1698
            |.|.|. |..|:..|...........||...:..:.|     |.:.|...|.     |..|....
  Fly   763 CDRQLAPGVFKITYGSEFNEEFFEDGTEFIAEFQELVLIFKRANRGVARICE-----KICGTCLL 822

  Fly  1699 GLAQSGAWACFDEFNRIELEVLSVVAQQILTIQRAIGRKVVKFFFEDTMLKLDPTCSIFITMNPG 1763
            ..|.||:         :::.|.    ||.|:.:.:....:::.::           |..:.:...
  Fly   823 HFAFSGS---------VDISVF----QQQLSSRLSSSGDILRSYY-----------SHVVELLSA 863

  Fly  1764 YAGRTELPDNLKVLFRTVAMMVPDYAMIGEITLYSNGFDMARNLSQKIVQAYKLCSEQLSSQSHY 1828
            ::|:          |::|     |..|..|...|.|  ||...|:..::.:.:....:|....|.
  Fly   864 FSGQ----------FQSV-----DDEMSAEWIAYVN--DMDDMLASSLMTSARGSLNKLYEALHC 911

  Fly  1829 DYGMRAVKSVLLASASLRRLYVDLPEPEIV---LRAIVDVNLPKFLEQDISLFIGIYMDLFP--G 1888
            |..|.:...:::.|.......|..|:.:.:   :..|||             .|...:|.||  |
  Fly   912 DADMASAPIIVVESDVKDGRIVFTPDMDAIGDMINGIVD-------------SIRSMLDQFPRLG 963

  Fly  1889 VELPMPQRGDILKWLHINLAD-------RNLQATPWYLEKILQIYEMLLVRHGLMIVGGSMGGKT 1946
            .:|.:|::.....:..:...|       |::||......:.|..||                .:.
  Fly   964 YKLKLPKKQQRQGFASVFREDQECSELMRSIQAEIGIQREELAKYE----------------SEW 1012

  Fly  1947 TAYQVLAQTLRNVSTDEEATLKEFPVTFRIINPKAITMGQLYGRFDPVSHEWYDGVLAKTFREQV 2011
            ...:||.||     |:||                                          ||:::
  Fly  1013 NKNRVLWQT-----TEEE------------------------------------------FRQRL 1030

  Fly  2012 QGPKGERAWVMFDGPVDAVWIENLNTVLDDNKKLCLMSGEIMQMTKLMNMMFEPADLEQASPATV 2076
            .. |...|.| |:|     .||:.:.:.||                   ::||.|         :
  Fly  1031 MS-KSRTAGV-FEG-----GIEHYSALADD-------------------VIFEDA---------I 1060

  Fly  2077 SRCGMIYMEPSQL---------GWRALHKSFINVLVNKVG--LGDIYMTLFEDMTEWL-VPAALE 2129
            :....|.:..:.|         .|:||:   |.:|::...  :|.:|..:..:....: ||..:.
  Fly  1061 TNVYFILINQNALKSTMLDWIEKWQALN---IKMLLDHGSNLMGAVYRYMRRNERNVMKVPRTIR 1122

  Fly  2130 FLPQCKQMLEL----SPIYQYQTFSRFFLHFLEKHK---QFNQAWFQQMFLFCFAWAYCSALTGQ 2187
            .....||:.|.    .|:.| ..|:.....|:..||   :.::..|:|:.....||.:...:..:
  Fly  1123 ETVAAKQLFEKLLKDVPVKQ-SAFTPMLELFVLLHKYQVKLSEETFEQVMGLETAWLHYLQVLEE 1186

  Fly  2188 GQKTFDALLRKVIYGSNENFPKPKYFSLNRGQMFPEKLLFLDYRFD 2233
            ..:..|          ||: .:.|......|:.|  ||:..|:..|
  Fly  1187 ADEMLD----------NED-SEAKLLLAKHGEKF--KLILKDFLED 1219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnah3NP_647937.2 DHC_N2 1086..1489 CDD:285579 85/467 (18%)
P-loop_NTPase 1620..1847 CDD:304359 42/232 (18%)
P-loop_NTPase 1934..2079 CDD:304359 21/144 (15%)
P-loop_NTPase 2264..2522 CDD:304359
P-loop_NTPase 2613..2916 CDD:304359
MT 2929..3272 CDD:289543
AAA_9 3304..3519 CDD:289547
Dynein_heavy 3659..4373 CDD:281078
CG9068NP_611111.1 DHC_N1 211..784 CDD:285571 121/678 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450600
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5245
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100025
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.730

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