DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnah3 and dnah5l

DIOPT Version :10

Sequence 1:NP_647937.2 Gene:Dnah3 / 38586 FlyBaseID:FBgn0035581 Length:4385 Species:Drosophila melanogaster
Sequence 2:XP_002666734.3 Gene:dnah5l / 335340 ZFINID:ZDB-GENE-091204-287 Length:4667 Species:Danio rerio


Alignment Length:4602 Identity:1323/4602 - (28%)
Similarity:2167/4602 - (47%) Gaps:704/4602 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RVSQAQKKGEKRQLNDCPFYNLTYGFDQLPLDPVKEFLQEKISHMQTDKIVGHCNREFDFHRYDL 96
            :|.:..:|...:::.:|...|..|   |.....:||.:|:.....|.:....:...:||.....|
Zfish   515 KVWELDRKELLKRMKECIELNQEY---QQCFRQMKEKIQQNPHERQLELSENYIFGKFDTFCKRL 576

  Fly    97 DNVKDEYDECDDDSLQELQ----LEDIIMPEQFEMLRDAKDHLYN--------FDSTACNQFPWI 149
            :.:.|.....:|.|:.:..    :|.|.|..| .::...|...||        ||:      .:|
Zfish   577 EKITDMATTLEDFSVLQFMKFEGVEKIYMRYQ-NIVSTIKSKTYNVLDHRKLEFDN------DYI 634

  Fly   150 DKWMTGVRPSEQEIYEMTSHLLEIYCNRRVRIFYPGCGTSSSLWTNQLRRQHGSPSELIGAYRTP 214
            :     .|...|.:|:....|::.:..|             .|.|.|:       .||:..:...
Zfish   635 E-----FRNQIQVLYQSVDALIDTWLQR-------------PLTTEQV-------LELLSRFENG 674

  Fly   215 SARHMRVNNMRGPPKKEKFTAGDHYAFRTPQECRNELMR-----------------VGKI----- 257
            ..|.|.:|       ::.......|      ||..|.:|                 .|||     
Zfish   675 VGRQMDLN-------QKYMVVLQRY------ECDLEFVRKCYQKEKDNPVSQLTPLAGKIEWSKH 726

  Fly   258 IDELIEPVLKAAEHKIGHGLTKYPDPPSCKDNTNRILRS----AGILVGKKKNCYVGKCRIHRKD 318
            :.:.||..::..:.|:  .:.:.||       ..:|:||    |.:|:..:        .||:|.
Zfish   727 LFKKIELPMQILKDKL--DILQMPD-------RRKIIRSYNRLAAVLLEYE--------MIHQKA 774

  Fly   319 FA-------------------TNEEF--------LRCLKRMEATHFPYMQPLQPVDPDDQKIK-- 354
            :.                   |.:||        |..|:  ||.:...:..|.|....|...|  
Zfish   775 WVEGVELGLSGLNASLLTRHPTTKEFYVNLDPLVLEVLQ--EANNMYKLGALVPDGIHDMAAKEP 837

  Fly   355 MLAKYRVELARAEKLFTLKIQKRYQCLLKSMSIVQLATYPSHLIRKAFRRINPRSALLQDAYQFI 419
            .|.:||.:|....|.|. .:.|:...:|||..        ...||.....::|...:|       
Zfish   838 QLKEYRYKLQMMLKEFH-AVVKKIPGVLKSPM--------KPFIRSVETALSPGLTIL------- 886

  Fly   420 VKEKRDWPKLPPEVILMDYLFVG--DRGVRQ-DLAILIIVCLIDLQEDFRHYVKRSFLNYLLSSN 481
                 .|..|.     :|| |:|  .:.::: :..:.::..::|.:           :|:.|.|.
Zfish   887 -----SWTSLN-----IDY-FIGCVYKALQELEQVLKVVTDILDCR-----------INHTLESM 929

  Fly   482 MERRRLQL-EREPPEFPILTISPPVSWRSNLLRGKARIGEVLMT-THPTVQALNRLWHDLYEDLV 544
            .....|.| |.||       ::|                |:.:| |..|:..             
Zfish   930 CSTTLLTLPENEP-------VTP----------------EMFLTHTAATIST------------- 958

  Fly   545 VVDLGQLLLAQRPLDADTVQVF---IEKSCADVRDLLLNDWLPRCADLMNEMRGTWKDLVPMSGK 606
                          :.:|::|.   :|:|..::            |:.:|.|      |.|....
Zfish   959 --------------ERETLKVASQQVERSMLEI------------AEELNRM------LKPSERV 991

  Fly   607 YGGRAAMLFRCIH---SAMSRHLNSLISKSINYLFKVLCAFKGGNRIEKYSMFDAKLKR--IPLM 666
            ...:.:    |:|   ..|:|.|..|           .|||        |.|.....:|  ..|:
Zfish   992 NLKKCS----CLHPDAKQMTRCLQCL-----------PCAF--------YIMMGQLCQRNTEALV 1033

  Fly   667 TLIASVVGAHFDHEPINMGPGVRPASNIYVYDEDDADPFQQPQVNQFVE-NVPDIDDVAQFELDH 730
            |...|.:.|        :...:..||:.|..........|.|.....|| .:|:|          
Zfish  1034 TATKSSLNA--------LHRRLLAASSSYRSSSPSGATIQVPLFRVSVELAIPNI---------- 1080

  Fly   731 SNKLYIYPYMQELPRIFTEHFKSILAVGYEIPRLEFVMSGGEPETKGFLHFIDEDHVDFLELCEK 795
                ...|..:.:..|..:....:|::..:||            ...:.| :.:|.:       :
Zfish  1081 ----VFRPSFEHIQGILNKGVNMVLSMAKDIP------------LWNYFH-LQQDQL-------Q 1121

  Fly   796 VEQIVKVNWQGVHVYLKPVYKYYFGLFQKL----------------ILPMVQKVWTE-----NNL 839
            .||:.........|..||:      |.:.|                ::|:|..:..:     .:|
Zfish  1122 AEQVAAREHGDETVVSKPI------LLRSLDRHVTEHKDVNKSLSQLVPLVSSLKADAGDILEDL 1180

  Fly   840 PELGAV--QELLKKLQAVSDTTYYLRDF-IPLNLF-------------------MLDNRHVKLSL 882
            .:..|:  |:..::::|...|...|.|| ..|:|:                   :.:...:|:||
Zfish  1181 SQFSALWNQDPAEQVKAFLQTNPILADFSTQLSLYSAYETQIHELPQTCTVGPILFETESLKMSL 1245

  Fly   883 RMYVREIYDFIIDFYKALNWNENRAICE-----------------ELEEMSMKAGE----RPEE- 925
               ::|.:.:..:|..|||...:..:.|                 :|:::....|.    |.|| 
Zfish  1246 ---IQECHTWKREFGAALNQQASAGMTEISSFVDGVNRQLQRPISDLDDVRESMGALRELREEEI 1307

  Fly   926 --------TPEVVALQN----YINDCREMRI----FAIKDEIKNVLKRVVFLLTHTYLSSDELHL 974
                    ..|..||.|    :.||....||    :|.| |:|.:.|.     |...||..|.|:
Zfish  1308 RIETIMGPVEESFALLNRHDLFFNDGNAERIDGVVYAWK-ELKVMAKE-----TQKKLSDVEPHM 1366

  Fly   975 NSRTFILPGELEEVLDLSAARLAVVRDNLELALRERRMEFEKLLAQEKRTMDGFRIREIRDVLTL 1039
            .:.  ::.|  .||...|........||                  ....:.|...||..|.|.:
Zfish  1367 KAE--LIAG--VEVFQKSVESFYGDYDN------------------SGPGVTGLPPREASDRLQV 1409

  Fly  1040 EELKERVDTVDLLFTTIENLSREAKAINTEETLLQIDVSAFPLLAEIIEKMEPIEKLWKTSYEFE 1104
            .:.|            .:.|.|:....::.|.|..:.|..:|.|..|..::..:.||    |...
Zfish  1410 YQAK------------FDELWRKYVTFSSGEELFGLPVGEYPDLHRIKRELNLLSKL----YSLY 1458

  Fly  1105 KDYLIWMFERFECLNADGVREQVEN--------MHKIMYKLSRQLAYNPVAKRAAEQMRMKIEKF 1161
            ...:..:...::.|.||...|::.|        :.|:...|....|:|.:.|        .|:.|
Zfish  1459 NSVIDSVSGYYDILWADLNIEKINNELLDFQNRIRKLPAALKEWQAFNDLKK--------TIDDF 1515

  Fly  1162 RVYLPVLDSICRHGLEKRHWDQISKILGRK--VNPKLFPTLKDMIDVDIMSILPQLEEIANAAGK 1224
            ....|:|..:....:..|||::|:.:...|  |....| :|:::::..::.....:|::..:|.|
Zfish  1516 NETCPLLYMMANKAMMARHWERITDLTKHKFEVEAPNF-SLRNVMEAPLLKCKEDIEDVCISAVK 1579

  Fly  1225 EYDLNNGLRIMQADWRDVMFEVLQYRDSDTHILASLDDIQ--TLLDDHIMRTQAMKRSPFITALG 1287
            |.|:...|:.:..:|....|....:|:....:|...|..:  .|::|.:|...::..:.:.....
Zfish  1580 ERDIEAKLKDVVTEWSGHQFTFATFRNRGELLLKGSDTSEKVALMEDSLMVLGSLMSNRYNAPFK 1644

  Fly  1288 SKADDWEARLLLIQNIIDAWTQVQITWMYLEPIFSSEDIMRQMPLEGRNFKAVDKLWRKIMKHTL 1352
            .....|..:|.....:|:.|..||..|:|||.:|...||.:|:|.|.:.|:.:||.|::||:...
Zfish  1645 PTIQQWVQKLSNSSEVIEKWLTVQNLWLYLEAVFVGGDIAKQLPQEAKRFQNIDKSWQRIMQRAH 1709

  Fly  1353 KDRHVMAATEYPEML-EVFTKAIEDLETVTKGLNTYLEQKRLFFARFFFLSNDELLEILSETKDP 1416
            :...|:......|.| ::....:|.||...|.|:.|||:|||.|.||||:|:..|||||.:..|.
Zfish  1710 EIPGVVQCCVGDETLQQLLPHLLEQLEVCQKSLSGYLEKKRLVFPRFFFVSDPVLLEILGQASDS 1774

  Fly  1417 MRVQPHLRKCFEGIGSLTFDDNM--EIVEMVSDEEERVALVRKINPQLANGLVEMWLKEVEMVML 1479
            ..:|.||...|:.:..:.|.:..  :|:...|.|.|.|.:...||   |.|.||.||.    ::|
Zfish  1775 HTIQAHLLNLFDNVNRVVFHEKNYDQILSFQSQEGETVNMSEPIN---AQGNVEAWLG----MLL 1832

  Fly  1480 DSVKEQMREAWEDYAMV------ERISWVVSWPGQV-VQGISCMAWTYEVEEAI-ETKELPAYLE 1536
            |.||:.:.......|||      :.:.:...:|.|| :.||. ..||.:.|||: ::|.....::
Zfish  1833 DGVKKTLHSIIRQAAMVIGDQGFKLVEFQSMFPAQVGLLGIQ-FIWTRDAEEALQQSKADKKIMQ 1896

  Fly  1537 KSNLQIAD----LVQLVRTDLQAGVRIAVEALIVLDVHDRDVVKYLTDCRITNIQDFDWISQLRY 1597
            .:|.:..|    |:.:...||....|...|.||.:.||.:|:...|....|.:..||:|..|.|:
Zfish  1897 TTNQKFLDLLNELIDMTTHDLTKMERTKYETLITIHVHQKDIFDDLVQMNIRSPLDFEWQKQSRF 1961

  Fly  1598 YWKVNEKNEDWVCVSMVVTDVE--YGMEYLGNLPRLVVTPLTDRCYRTLMGALKLCLGGAPEGPA 1660
            |: :::.:.   |: :.:||||  |..||||...|||:||||||||.||..||.:.:||||.|||
Zfish  1962 YF-IDDTDR---CI-IQITDVEFDYCNEYLGCTDRLVITPLTDRCYITLAQALGMSMGGAPAGPA 2021

  Fly  1661 GTGKTETCKDLAKAVAKKCVVFNCSDGLDYKALGKFFKGLAQSGAWACFDEFNRIELEVLSVVAQ 1725
            |||||||.||:.:.:.|..|||||||.:|::.||:.:|||||||||.||||||||||.||||.||
Zfish  2022 GTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRIYKGLAQSGAWGCFDEFNRIELPVLSVAAQ 2086

  Fly  1726 QILTIQRAIGRKVVKFFFED-TMLKLDPTCSIFITMNPGYAGRTELPDNLKVLFRTVAMMVPDYA 1789
            ||..:.:....|..:|.|.| .::.:|....||:|||||||||.|||:|||:.||||||||||.|
Zfish  2087 QIYIVLQCKKNKKSQFIFTDGDVVDMDKEFGIFLTMNPGYAGRQELPENLKIQFRTVAMMVPDRA 2151

  Fly  1790 MIGEITLYSNGFDMARNLSQKIVQAYKLCSEQLSSQSHYDYGMRAVKSVLLASASLRRLYVDLPE 1854
            :|..:.|.|.||...:.||:|....||||.||||.|.|||:|:|.:.|||....:::|.....||
Zfish  2152 IIMRVKLASAGFRENQVLSRKFYTLYKLCEEQLSKQVHYDFGLRNILSVLRTLGAVKRSNPTEPE 2216

  Fly  1855 PEIVLRAIVDVNLPKFLEQDISLFIGIYMDLFPGVELPMPQRGDILKWLHINLADRNLQATPWYL 1919
            ..:|:|.:.|:||.|.:::|..||:.:..|||||:.|......|:...:.....:..|.|.|.::
Zfish  2217 KTVVMRVLRDMNLSKLVDEDEPLFMSLINDLFPGIMLDKAGYPDLEAAITKQAEEAGLIAHPPWI 2281

  Fly  1920 EKILQIYEMLLVRHGLMIVGGSMGGKTTAYQVLAQTLRNVSTDEEATLKEFPVTFRIINPKAITM 1984
            .|::|:||...||||:|.:|.|..||||.    ..||....||.....||..     :||||||.
Zfish  2282 LKLVQLYETQRVRHGMMTLGPSGTGKTTC----IHTLMKAMTDCGNPHKEMR-----MNPKAITA 2337

  Fly  1985 GQLYGRFDPVSHEWYDGVLAKTFREQVQGPKGERAWVMFDGPVDAVWIENLNTVLDDNKKLCLMS 2049
            .|::|..|..:::|.||:.:..:|:.::..|||..|::.||||||:||||||:||||||.|.|.:
Zfish  2338 SQMFGTLDVATNDWTDGIFSTLWRKTLKSKKGEHIWIVLDGPVDAIWIENLNSVLDDNKTLTLAN 2402

  Fly  2050 GEIMQMTKLMNMMFEPADLEQASPATVSRCGMIYMEPSQLGWRALHKSFINVLVNKVGLGDIYMT 2114
            |:.:.|.....::|||.:::.||||||||.||::|..|.|.|:.:.::::..:...  ..|:.:.
Zfish  2403 GDRIPMAPNCKVVFEPHNIDNASPATVSRNGMVFMSSSVLDWQPILQAWLKKIPPM--QADVLLA 2465

  Fly  2115 LFEDMTEWLVPAALEFLPQCKQMLELSPIYQYQTFSRFFLHFLEKHKQFNQAWFQQMFLFCFAWA 2179
            .|..:.:.|:......:....|:||...|.|.....:..|..:|: |..|.|...::|:|...|:
Zfish  2466 AFNSIYQDLMNFVFTAVSPKMQLLECMYIKQTIDLLQGLLPAVEE-KNLNAAHINRLFIFAVMWS 2529

  Fly  2180 YCSALTGQGQKTFDALLRKVIYGSNENFPKPKYFSLNRGQMFPEKLLFLDYRFDEAENWWTW-QK 2243
            ..:.:..:.:...:..|:|  :.:..:.|..:          .|:.:| ::.......|..| .:
Zfish  2530 AGALMELEDRAKMEVFLKK--HNARLDLPSTQ----------GEQTIF-EFLVSSTGEWDLWATR 2581

  Fly  2244 SDDSASTTSNFPENAQISELIVPTKETGYISYWQEFCISKSYAMLVVGPTGTGKSAIITSNLLAM 2308
            ..:......:.|:.|.|   :||..:.....:..:..:.:..|:|::|..||.|:.:|.......
Zfish  2582 VPEYIYPKDSVPDYASI---LVPNVDNIRTDFLMQTIMKQGKAVLLIGEQGTAKTVMIKGYTSKY 2643

  Fly  2309 PKFANLVNVINFSARTSAQMVQDTIMSKLDRRRKGVFGPSLGKKCTVFCDDVAMPSKDTYGSQAP 2373
            ....||...:|||:.|...|.|.||.|.:|:|....:||..|||.|||.||:.||..:.:|.|..
Zfish  2644 DPETNLSKSLNFSSATQPGMFQQTIESYIDKRMGTTYGPPGGKKMTVFVDDINMPVINEWGDQIT 2708

  Fly  2374 LELLRTWLDHGYWSDLVD----TTKIELVDMTLMCAM---GTLGGSNFIFPRLYRHMFVVAVDSF 2431
            .|::|..:..|.:..|..    ||   :||:.|:.||   |  ||.|.|..||.|...|......
Zfish  2709 NEIVRQLMVQGGFYSLERPGEFTT---VVDLQLVAAMIHPG--GGRNDIPQRLKRQFCVFNCTLP 2768

  Fly  2432 EDSTIVRIFTTIGDWHF--SKGYPEKVALLSRGLSEAMVSVYRDAIRSFLPTPAKSHYSFSLRDI 2494
            .:|:|.:||.|:...:|  .:|:||:|..|:..|......|::......||:|||.||.|:|||:
Zfish  2769 SNSSIDKIFHTLASGYFCVERGFPEEVCSLAAALVPTTRKVWQAVKAKMLPSPAKFHYIFNLRDL 2833

  Fly  2495 TRVFQGIVMVPPKRMPDPEKLGRLWAHETYRVFYDRLVDQQDR---DRLL--VMAVDACKSNL-R 2553
            :|::|||:.|..:....|:.|..|:.||..||..||.:|::||   |.:|  :.|.|...|.| :
Zfish  2834 SRIWQGILTVGSEVCQTPQLLASLFRHECSRVIADRFIDEKDRETFDGILERITAQDHGPSLLEQ 2898

  Fly  2554 FPLEQAFGERIEPGEKLTDNDLRNLFYGNYMEP-DAE---PKFYDEGDTYEKLEKLMKYYLREYN 2614
            .|.:..|.:.:....::|..           || |||   ||.|:...|::.|.:.:..:..:||
Zfish  2899 GPWQGYFVDFLRDAPEMTGE-----------EPEDAEEETPKVYEPIPTFKALSERLSMFQEQYN 2952

  Fly  2615 -SFSSTPMDLVMFRFAIEHVSRVSRVLQMPRGNILMVGMGGSGRRSSARLAAYIADCRLMTVQVS 2678
             :.....||||.|..|:.|:.::||:::..|||.|:||:||||::|..|||::||..:...:.::
Zfish  2953 EAVRGAAMDLVFFEDAMIHLMKISRIIRTARGNALLVGVGGSGKQSLTRLASFIAGYQSFQITLT 3017

  Fly  2679 KSYTITDWRDDLKKILMSASFNLNHTVFLFSDAQATDEGYVEDINGILNTGDLPNLYQLEDKATI 2743
            ::|.:::..:|||.:...|........|:|:|....||.::|.:|.:|.:|::.||:..::...|
Zfish  3018 RTYNVSNLIEDLKALYRIAGLEGKGVTFIFTDNDIKDEAFLEYMNNVLASGEVSNLFARDEVDEI 3082

  Fly  2744 MENMANVAKQLGKILDTLP---SEVYAYYIDRIREQLHIALAFSPIGDSFKERIRVYPSLINCCT 2805
            .:::....|   |.|...|   ..:|.|::.|:|..||:||.|||:|:..:.|...:|.||:.||
Zfish  3083 TQSLIPAMK---KDLPRCPPTIDNLYNYFLSRVRSNLHVALCFSPVGEKLRSRALKFPGLISGCT 3144

  Fly  2806 IDWYMPWPEEALSRVGVYFVSSMNLNRPHGEETQEPVQSKDAADPDEEEVRRETVGVEREQTQLE 2870
            :||:..||.:||..|..:|:|:.:|.                   ..:||:|..|........:.
Zfish  3145 VDWFQRWPRDALVAVAQHFLSNYSLR-------------------CSDEVKRSVVQTMGTFQDMV 3190

  Fly  2871 ADLVDCVMYFHQSVVDASEKCYLELNRRNYVTPSAYLELLKAFRTFYTRKLDEITRLRDRYTTGL 2935
            |::  |..||.:            ..|:.||||.:||..:|.::..||.|::.:..|.:|..|||
Zfish  3191 AEI--CTEYFQR------------FRRQTYVTPKSYLTFIKGYQMIYTEKIENVGVLAERMNTGL 3241

  Fly  2936 EKLDFAAGQVGEMQTNLYDLQPKLKVLSEETDRIMVNIERETAEAEKKKEVVGADEAAANEAAAA 3000
            |:|..|...|.|::..|.:.:..|:|..::...:::.:..:...|||.|       |...:....
Zfish  3242 ERLMEAELSVNELRVELREKEKVLEVAKQKAGEVLLEVTAKAQAAEKVK-------AQVQKVKDK 3299

  Fly  3001 AQAIKDDCETD-------LAEAIPAMEAALEALNTLKPADIFIVKSMKNPPYGVKLTMEAVCVIR 3058
            ||||.|:.|.|       |..|.||:||:..||.|:|||||..|:.:..||:.:...|:.|.::.
Zfish  3300 AQAIVDEIEGDKKVAESKLEAAKPALEASEAALKTIKPADIATVRKLGKPPHLIMRIMDCVLLLF 3364

  Fly  3059 GIKPDR-KPDPSGHMVEDYWGPSMRMLSDMKFLDSLKTFDKDNIPPPIIKRIREKYIADRDFVPE 3122
            ..:.|. ..||....|:..||.:::::::..||..|..|:||.|...::: :...|:|..|:..|
Zfish  3365 QRRVDGVTMDPERPCVKPSWGEALKLMNNSGFLSMLLNFNKDTITEEVVE-LLSPYLAMEDYNLE 3428

  Fly  3123 KIKAASMACEGICRWVRAMDVYDKVARIVMPKK-------AALAEAEGELSQQMEKLNAKRAELQ 3180
            ..|.......|:|.|..||..:..:.:.|:|.|       |.|..|:.|||:..|:|:||:.|  
Zfish  3429 TAKRTCGNVAGLCSWTEAMVEFFGINKEVLPLKANLKLQEARLTVAQDELSRAQEQLDAKQKE-- 3491

  Fly  3181 VILDKLQKLNDFFAEKSREKKRLEDEIDNCEKKLNRAEKLLGGLGGEKTRWSEAAKNLHESISNI 3245
              ||..|.:.|   ...:||:.|.|:.:.|:||::.|..|:.||||||.||:|::......|.::
Zfish  3492 --LDDAQAMYD---AAMKEKQDLLDDAEACKKKMSNAVALIDGLGGEKIRWTESSAQFERQIKDM 3551

  Fly  3246 VGDVLLAGGCTAYLGYFTTEYRVNILDDWNALCKRKHIPSSETFSLATTLGHPMTIRAWSLAGLP 3310
            |||||||.|..:|.|.|..|||..::..|......:|||.||..:|...|....||..|:|.|||
Zfish  3552 VGDVLLATGFLSYSGPFNQEYRTLLMQQWKKEMDSRHIPYSENLNLINMLVDNATIGEWNLQGLP 3616

  Fly  3311 ADNFSVENGIIVTNSSRYSLLIDPQVQANKWIKNMEKNNNLKVIKQSDANYMQVLELAITFGQPV 3375
            .|:.|::||||||.:|||.||||||.|...||||.|::|:|:|...:...:...||..::.|:|:
Zfish  3617 NDDLSIQNGIIVTKASRYPLLIDPQGQGKIWIKNREQSNDLQVTSLNHKYFRTHLEDCLSQGKPL 3681

  Fly  3376 LIENVGEKLDSNLTPILEKNVIKHKGGLFIKSGDQMIEYNPNFRLYITTCLRNPRYPPEVMVMVT 3440
            |:|:|||:||..|..|||||.||......:|.||:.::....|.|||||.|.||.|.||:.....
Zfish  3682 LLEDVGEELDPVLDNILEKNFIKTGKTSKVKVGDKEVDVMETFTLYITTKLANPAYSPEINAKTG 3746

  Fly  3441 VLNFMITEQGLREQLLAIVVAHERPDLQEKKEQLIIESARNRDALYTIESKILEVLSTSEGNVLE 3505
            |::|.:|.:||.:|||..|:..|:.:::.::.:|:.|...|:..:..:||.:|..|::.:|:::|
Zfish  3747 VVDFTVTMKGLEDQLLGRVILIEKKEMEAERVKLLEEVTSNKRKMQELESNLLYRLTSIQGSLVE 3811

  Fly  3506 DENAINILSSSKILSEDIQEKQVIAVATEIEIDAARQQYIPVSKHSAILFFCISELANVDPMYQY 3570
            ||:.|.:|..:|..::::.:|..:|..|||.|:.||::|.||:...:||:|.|.|::.|:.|||.
Zfish  3812 DESLIEVLKVTKTTAQEVSQKLTVAAETEININHAREEYRPVATRGSILYFLIVEMSLVNVMYQT 3876

  Fly  3571 SLSWFLNLFVNTILKAPKSDQLSERLKNLNDYFTKSIYTNVCRSLFEKDKLVISLVMCLGILVSQ 3635
            ||..||.:|..::.|:|||...::||:|:.::.|..::....|.|:|..|.:.:|::.|.|.:..
Zfish  3877 SLRQFLGIFDMSMEKSPKSQVTAKRLENIMEFLTFEVFRYTARGLYEDHKFLFTLLLALKIDLQT 3941

  Fly  3636 GRVEKAALLFFLTGG--IGYKTIPPNPLGAWLPDKSWASVCKAADLEGLKNLPQMMETYSDEWHN 3698
            ..:....|..|:.||  :...::...| ..|:.|.:|.::.:.:.|.....|...:......|.:
Zfish  3942 KNISHNELQTFIKGGASLDLNSVEAKP-KRWILDTTWLNLVQLSSLHTFATLLTQVGRNDRAWKS 4005

  Fly  3699 FYDASNPDQLQLPAPHNTVNDMY-FLIVIKSLRPDKLVPAVRAFITRNLDRSFVEPPPFDLAASF 3762
            ::|.:.|::..||..:.:..|.: .|::|:|..||:.:...|.:|..::...:.|....|:.|..
Zfish  4006 WFDEATPEESPLPDGYESQLDAFRKLLLIRSWCPDRTIAQARKYIAESMGVKYAEGVILDMEAMC 4070

  Fly  3763 ADSSPKIPLVFLLSAGSDPMASLFMFAKQRNMYDKLKTISLGQGQGPRAEKMIMEAARHGQWVVL 3827
            :::..:||||..||.||||..::...||.:.:  ..:.||:||||...|.:::.::...|.|::|
Zfish  4071 SEAEKRIPLVCFLSMGSDPTENIDRLAKSKGI--PCRPISMGQGQEVHARRLLAQSMSDGGWLLL 4133

  Fly  3828 QNCHVAISWMGD-LERICNDTTLTDGANHDYRLWCTSYPSAVFPVSVLQNSVKMTNEPPKGLRAN 3891
            ||||:.:.::.: ||.:    |.|:..:.::|||.|:.....||::.||:|:|.|||||:|::|.
Zfish  4134 QNCHLGLDFLDEGLETV----TTTENIHDNFRLWVTTDVHPKFPINFLQSSIKFTNEPPQGVKAG 4194

  Fly  3892 MHRSFTSDPLMRDKF-FTNAFLFSDSANKCWLRGVFALVFFHAVVQERREFGPLGWNIPYEFNES 3955
            :.|::.|  :.:::. .||.        ..|....:|:.|.|..|||||:|||||||||||||::
Zfish  4195 LKRTYNS--VTQEQLEITNM--------PQWRPLFYAVAFLHTTVQERRKFGPLGWNIPYEFNQA 4249

  Fly  3956 DLKISLLQLKMFI-NQSQSIPFRGHV------YLTGECNYGGRVTDDKDRRLILSLLNMIYNPNT 4013
            |...|:    .|: |....|..:..|      |:.||..||||||||.|:|| |:....|:...:
Zfish  4250 DFTSSV----QFVQNHLDDIDIKRGVNWNCLRYMLGEVQYGGRVTDDMDKRL-LNTFARIWFSES 4309

  Fly  4014 IEEDNYALSQSGTYRVPLSPTRLNSIEYVSSFPLSPHPEVYGLHENADINRNVKETNALISGVLL 4078
            :..|.:...:.  |.:|.:....:...::.:.||...|||:|||.||||.......|..:|.:| 
Zfish  4310 MFADKFCFYKG--YTIPKARMLQDYHAHIDALPLVDTPEVFGLHPNADITYQTNLANDTLSTIL- 4371

  Fly  4079 TQTDLMASVKASSSGGAKEDPAIAICKQVLKQLPEEFNIDEVSKTYPVIYT-NSMNTVLRQELIR 4142
               ::.....:|..|..:|.....:..::|::||.::...||..:...:.. ..|...|||||.|
Zfish  4372 ---NIQPKDSSSGEGETRESSVQKMANEMLEKLPADYVPHEVKSSLQKMGAFQPMTIFLRQELDR 4433

  Fly  4143 FNRLLSYIRKSLVNVGKAVVGQIAMIPELERTHASMVIGKLPADWLKKSYPSLKPLGSYVSDLLA 4207
            ..|::..:|.:|.::..|:.|.|.|..:|.....||...::|..|.|.|:.:.. ||.:.::||.
Zfish  4434 MQRVIGRVRSTLTDLKLAIDGTIIMSEDLRDALDSMYDARVPKSWQKISWEAAS-LGFWFTELLE 4497

  Fly  4208 RLAFFQEWIDNGEPMVYWISGFYFTQSFITGVLQNYSRKN---RFQIDMILIEFAVT---KFEVQ 4266
            |...|..|..||.|:.:|::||:..|.|:|.:.|..:|.|   .:.:|.:::...||   |.:|.
Zfish  4498 RNQQFYSWTFNGRPLQFWLTGFFNPQGFLTAMRQETTRMNLSKGWALDTVILLNDVTRMMKEDVT 4562

  Fly  4267 VPGTPDI-GAYIRGIFIEGARWNRKTKEVDESFSKVLFDTLPVIYLRPVLKALEDLPRSTAGGEP 4330
            .|...|| |.||.|::::||.|:::..::.||..||||:.|||:::..|       ..:|...:|
Zfish  4563 SPPPADIGGVYIYGLYLDGAGWDKRNVKLTESSPKVLFNLLPVVHVYAV-------SSTTESKKP 4620

  Fly  4331 E-TIYDCPVYKTSERRGVLSTTGHSTNFVMYLQLRCSRKPMHWINRGTACLC 4381
            . .:|.|||||...|..:        .::..|.||.|:.|.||..||.|.||
Zfish  4621 AMNLYSCPVYKKPRRTDL--------TYIFSLFLRSSQNPDHWTLRGVALLC 4664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnah3NP_647937.2 DHC_N2 1083..1489 CDD:462462 111/420 (26%)
DYN1 <1322..4005 CDD:227570 943/2751 (34%)
AAA_6 1620..1946 CDD:463697 166/326 (51%)
AAA_9 3302..3523 CDD:463702 89/220 (40%)
Dynein_C 4067..4381 CDD:465677 95/322 (30%)
dnah5lXP_002666734.3 DHC_N1 347..896 CDD:462457 89/474 (19%)
DHC_N2 1441..1846 CDD:462462 111/424 (26%)
DYN1 1652..4309 CDD:227570 954/2786 (34%)
AAA_6 1981..2308 CDD:463697 166/326 (51%)
Dynein_C 4360..4664 CDD:465677 95/323 (29%)

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