DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnah3 and dnah9

DIOPT Version :10

Sequence 1:NP_647937.2 Gene:Dnah3 / 38586 FlyBaseID:FBgn0035581 Length:4385 Species:Drosophila melanogaster
Sequence 2:NP_001353479.1 Gene:dnah9 / 266676 ZFINID:ZDB-GENE-020925-1 Length:4464 Species:Danio rerio


Alignment Length:4813 Identity:1327/4813 - (27%)
Similarity:2177/4813 - (45%) Gaps:899/4813 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 MPEQFEMLRDAK-DHLYNFDSTACNQFPWIDKWMTGVRPSE-----QEIYEMTSH-LLEIYCNRR 178
            |.||..::.|.: |:|.|....|.|..|  ::|...|...|     ||..:.:.| .|.:..|..
Zfish     1 MEEQEPLITDKRLDYLENCVLKALNVKP--ERWERCVSAEEQRRVIQEFLDQSEHSTLSVSVNSA 63

  Fly   179 VRIFYPGCGTSSSLWTNQ---LRRQHGSPSELIGAYRTPSARHMRVNNMRGPPKKEKFTAGDHYA 240
            .:: .|..|.|:::.:..   ::|..|:                    :.....|.:..:||   
Zfish    64 GQL-VPALGLSAAVKSKAVFFVKRGKGA--------------------LTADKMKTQLFSGD--- 104

  Fly   241 FRTPQECRNELMRVGKIIDELIEPVLKAAEHKIGHGLTKYPDPPSCKDN---------TNRILRS 296
                 .|.:.|.:...::|:::||||.        .|....|.|.....         .|.:..:
Zfish   105 -----MCYSPLEQFSVLVDKVVEPVLS--------NLNNQRDFPKVVSQDLMRHIHALQNNVFVT 156

  Fly   297 AGILVGK--------------------KKNCYVGKCRIHRKDFAT---NEEFLRCLKRMEATHFP 338
            ||.:.||                    |:...|.|..||..:...   :.:..:.||:..:.  |
Zfish   157 AGQIKGKTHLPVPLGFKQFEQCSQQLDKRFHVVDKSLIHSMETVVIDWSHQVYKVLKKDSSE--P 219

  Fly   339 YMQPLQPVD-----------PDDQKIKMLAKYRVELARAEKLFTLKIQKRYQCLLKSMSIVQLAT 392
            .::...|..           .|.|.|:...:....|..||.|..:. ...|....|.:..|..|.
Zfish   220 LLEGRNPTPHAEIQFWRNRLADLQGIQQQLQSSKVLTLAELLLAVD-SSYYPAFAKMIQDVMEAH 283

  Fly   393 YPSHLIRKAFRRINPRSALLQDAYQFIVKEKRDW----PKLPPEVILMDYLFVGDRGVRQDLAIL 453
            ..|..|...   :.|...|::|.      |..|:    .|:||.:..:..::...|...:...::
Zfish   284 NESKNITTF---LKPLERLIEDL------ENADFTELKAKIPPLMHTVCLIWANCRYYSKPARVI 339

  Fly   454 II---VCLIDLQEDFRHYVKRSFLN-----------YLL------------SSNMERRRLQLER- 491
            ::   :|.:.:|:      .|||||           .||            .:..|.||..|.. 
Zfish   340 VLLQEICNLLIQQ------ARSFLNPDDILKGDVLESLLRVQAAVDLLTHFKNTYEDRRANLSHY 398

  Fly   492 -------EPPEFPILTISPPVSWRSNLLRGKARIGEVLMTTHPTV------------QALNRLWH 537
                   :|.:|..|.:...:......||   .|..||:|....:            ::|:::..
Zfish   399 QKNEDPVKPWDFSPLMVFVGLDHFMKRLR---TIETVLLTVMDMMRLEKIEFGGIQGKSLSQIVQ 460

  Fly   538 DLYEDLVVVDLGQLLLAQRPLDADTVQVFIEK--SCADVRDLLLNDWLPRCADLMNEMRGTWKDL 600
            .|:||.:                .|.:.|.||  .|.||.::              |....:.: 
Zfish   461 RLHEDFL----------------QTYKSFSEKPYDCLDVNNM--------------EFESDFAE- 494

  Fly   601 VPMSGKYGGRAAMLFRCIHSAMSRHLNSLI------SKSINYLFKVLCAFKGGNRIEK------- 652
                          |:......:|.|.::.      :..:.:.||||..|  |..:|:       
Zfish   495 --------------FQLTVDDTNRRLGAIFCNAFDDASGLEHSFKVLDMF--GRLLEQPLIAAEA 543

  Fly   653 -------YSMFDAKL---KRI--------------PLMTLIASVVGA------------------ 675
                   ..:||.:|   |.|              |:...:.:|.|.                  
Zfish   544 QARYPILIKLFDKQLEDCKTIFKKQMQMEETRGYSPVSKNMPAVSGGLKFVQELQERIQTLYNNF 608

  Fly   676 HFDHEPINMGPGVRPASNIYVYDEDDADPFQQPQVNQFVENVPDI-----DDVAQFELDHSNKLY 735
            .|.:.|..  ..|.....:..|||      ...|:.|:...:.||     .:.:||.|   ||  
Zfish   609 RFINHPCM--ESVDAKEMMQKYDE------LMRQLKQYSSKLYDIWTSSVAEKSQFNL---NK-- 660

  Fly   736 IYPYMQELP--RIFTEHFK-SILAVGYEIPRLEFVMSGGEPETKGFLHFIDE---DHVDFLELC- 793
              |.:...|  |:.:.:|. .:::|..|:..||...:...|:....::...|   .:|..|||. 
Zfish   661 --PLISREPRSRLLSVNFSPQLVSVLREVKYLEARQAEIIPDAAAEIYSSRELLWQYVANLELTT 723

  Fly   794 ----EKVEQIVKVN-----------------------W--QGVHVYLKPVYKYYFGLFQKLILPM 829
                :.:..::.|.                       |  :|:..|::.|.:....|.|:|..  
Zfish   724 GWYNKIISSVLDVEMPLVQGQLTDIDNKLKGAQENLCWISEGIWEYIQDVREAVSDLEQRLRR-- 786

  Fly   830 VQKVWTENNLPELGAV---------------QELLKKLQAVS---DTTY-YLRDF-IPLNLFMLD 874
                 |::|:.|:.::               :|:|..|:..|   :.|| ::|.. ..::|.:.:
Zfish   787 -----TKDNVEEMQSLMKSWATPLHDRKEGKKEMLLNLEERSERVERTYSHIRSSGARIHLLLQE 846

  Fly   875 NRHV------KLSLRMYVREIYDFIID-FYKALN-----WNENR---AICEELEEMSMKAGERPE 924
            |.|:      ....::||..:.:.:|| |:.|:.     :.||.   |..|.|.|..::.     
Zfish   847 NLHLFKADPSSPQWKIYVDYVDEMVIDGFFNAIESTLKFFMENTDADAGLEPLFEAQLRL----- 906

  Fly   925 ETPEVV--------------------------------------ALQNYINDCREM-RIFAIKDE 950
            :.|::|                                      ...:|.:|..:| .:...:..
Zfish   907 QVPDLVFQPSLELRSSDSLHELVEGLLRDVFKTSTLVPRLAKHSGFPDYQDDMEDMEELVQTRQH 971

  Fly   951 IKNVLKRVVF--------LLTHTYLSSDELHLNSRTFILPG------ELEEVLD---------LS 992
            :...:||::.        |..:.||..|:.....|.|:|.|      |:||..:         |.
Zfish   972 VMQRVKRIMMKCCEYRNSLERYAYLYVDDRKEFMRQFLLYGHVLTSQEIEEHAEHGVPESPPTLE 1036

  Fly   993 AARLAVVRDNLELALRE-RRME----FEKLLAQEKRTMDGFRIREIR-----------DVLT--- 1038
            ..|..|  |:.|....| :|||    ||:.:..:.|......:..::           |.:|   
Zfish  1037 RFRQQV--DSYERLYEELQRMEPVMVFERWMRVDARAFKSALLNTVKKWSLMFKQHLIDHVTNSL 1099

  Fly  1039 --LEE------------------------------LKERVDTVDLLF----TTIENLSREAKAI- 1066
              |||                              :|||..:.|.:|    .||:.|....:.: 
Zfish  1100 SDLEEFIRLTEAGLGQKVEEGDYRGLVEIMGFLMAVKERQSSTDEMFEPLQQTIDLLKTYEQELP 1164

  Fly  1067 ---------------NTEETLLQIDVSAFPLLAEIIEKME------PIEKLWKTSYEFEKDYLIW 1110
                           |.::..:|:.....||.|..:..:.      .:|:     :.|.:.:...
Zfish  1165 DVVYKQLEVLPEKWNNMKKQAVQVKQHVAPLQAAEVANLRRRCAAFDVEQ-----HTFRETFRKK 1224

  Fly  1111 MFERFECLNA----DGVREQVENMHKIMYKLS-------------RQLAY--------------- 1143
            .|.||:.:|.    |....|::.:..:|..|:             |||..               
Zfish  1225 HFFRFDSVNVHEQLDTTHTQIQELESLMAGLTESANLFEVGVPDYRQLKQCRRELPLLKELWDQA 1289

  Fly  1144 ------------NPVAKRAAEQMRMKIEKFRVYLPVLDSICR-----HGLE-------------- 1177
                        .|.::...:.|..:.::|...|.:||...|     :||:              
Zfish  1290 LAVRSCLEAWQRTPWSQINVDDMETECKRFSKELRLLDKEARAWDVFNGLDGMVKNTLTSLRAVA 1354

  Fly  1178 --------KRHWDQISKILGRKVNPKLFPTLKDMIDVDIMSILPQLEEIANAAGKEYDLNNGLRI 1234
                    .|||.|:....|.:.......||.|::.:::.....::..|.:.|.||..:...|..
Zfish  1355 ELQNPAIRPRHWQQLMAATGVQFTMDQDTTLADLLRLNLHHFEEEVRGIVDRAVKEMGMEKVLGE 1419

  Fly  1235 MQADWRDVMFEVLQYRDSDTHILASLDDIQTLLDDHIMRTQAMKRSPFITALGSKADDWEARLLL 1299
            :.|.|..:.||...:..:...:|.|.:::...|:|:.::.|.:..|.:|:....:...|:.:|.:
Zfish  1420 LDATWTSMSFEFEAHPRTQVPLLKSSEELIETLEDNQVQLQNLMSSKYISFFLEEVSSWQRKLSV 1484

  Fly  1300 IQNIIDAWTQVQITWMYLEPIF-SSEDIMRQMPLEGRNFKAVDKLWRKIMKHTLKDRHVMAATEY 1363
            ..::|..|.:||.||.:||.|| .|:||..|:|.:.:.|:.:|..:|::.....:..:|:.||..
Zfish  1485 TDSVISIWFEVQRTWCHLESIFIGSDDIRSQLPEDSKRFEGIDGDFRELTLDARQTPNVVEATNK 1549

  Fly  1364 PEMLEVFTKAIEDLET----VTKGLNTYLEQKRLFFARFFFLSNDELLEILSETKDPMRVQPHLR 1424
            |.:   ::| :||:::    ..|.|:.||:.|||.|.||:|:|:.:||:|||...||.:||.||.
Zfish  1550 PGL---YSK-LEDIQSRLALCEKALSEYLDTKRLAFPRFYFISSADLLDILSSGTDPHQVQKHLS 1610

  Fly  1425 KCFEGIGSLTF----DDNME--IVEMVSDEEERVALVRKINPQLANGLVEMWLKEVEMVMLDSVK 1483
            |.|:.:..|.|    |..::  .:.|.|.|:|.|......:   ..|.||:||..|...|..:|:
Zfish  1611 KLFDNMAKLQFQAGEDGGLQKTALGMFSKEDEHVPFSHACD---CTGQVEVWLNRVMDSMRATVR 1672

  Fly  1484 EQMREAWEDYAMVERISWVVSWPGQVVQGISCMAWTYEV-------EEAIETKELPAYLEKSNLQ 1541
            .:|.||...|....|..|:..:|.||....:.:.||.:|       ||..| ..:..|.:|...|
Zfish  1673 HEMTEAVAAYEEKPREQWLFDYPAQVALTCTQIWWTTDVGMAFSRLEEGYE-NAMKEYYKKQVNQ 1736

  Fly  1542 IADLVQLVRTDLQAGVRIAVEALIVLDVHDRDVVKYLTDCRITNIQDFDWISQLRYYWKVNEKNE 1606
            :..|:.::...|..|.|..|..:..:|||.||||..:...::.|.|.|.|:||||:.|...||: 
Zfish  1737 LNTLITMLIGQLTPGDRQKVMTICTIDVHARDVVDKIITQKVENSQAFLWLSQLRHRWGDREKH- 1800

  Fly  1607 DWVCVSMVVTDVE--YGMEYLGNLPRLVVTPLTDRCYRTLMGALKLCLGGAPEGPAGTGKTETCK 1669
               |.:. :.|.:  |..|||||.||||:||||||||.||..:|.|.:.|||.||||||||||.|
Zfish  1801 ---CFAN-ICDAQFLYSYEYLGNTPRLVITPLTDRCYITLTQSLHLVMSGAPAGPAGTGKTETTK 1861

  Fly  1670 DLAKAVAKKCVVFNCSDGLDYKALGKFFKGLAQSGAWACFDEFNRIELEVLSVVAQQILTIQRAI 1734
            ||.:|:.....|||||:.:|||:.|..:|||||:|||.||||||||.:|||||||.|:.:||.||
Zfish  1862 DLGRALGIMVYVFNCSEQMDYKSCGNIYKGLAQTGAWGCFDEFNRISVEVLSVVAVQVKSIQDAI 1926

  Fly  1735 GRKVVKFFFEDTMLKLDPTCSIFITMNPGYAGRTELPDNLKVLFRTVAMMVPDYAMIGEITLYSN 1799
            ..|..:|.|....:.|.|:..||||||||||||||||:|||.|||..||:|||:.:|.||.|.:.
Zfish  1927 RDKKQRFNFMGEDVCLVPSVGIFITMNPGYAGRTELPENLKALFRPCAMVVPDFELICEIMLVAE 1991

  Fly  1800 GFDMARNLSQKIVQAYKLCSEQLSSQSHYDYGMRAVKSVLLASASLRRLYVDLPEPEIVLRAIVD 1864
            ||..||.|::|.:..|:||.|.||.|.|||:|:||:||||:.:.||:|......|.::::||:.|
Zfish  1992 GFIEARLLARKFITLYQLCKELLSKQDHYDWGLRAIKSVLVVAGSLKRGDPGRAEDQVLMRALRD 2056

  Fly  1865 VNLPKFLEQDISLFIGIYMDLFPGVELPMPQRGDILKWLHINLADRNLQATPWYLEKILQIYEML 1929
            .|:||.:..|:.:|:|:..||||.:::|..:..|..|.:..::.:..|||...::.|::|:.|:|
Zfish  2057 FNVPKIVTDDMPVFMGLIGDLFPALDVPRKRDMDFEKLVRQSVLELKLQAEDNFVLKVVQLEELL 2121

  Fly  1930 LVRHGLMIVGGSMGGKTTAYQVLAQTLRNVSTDEEATLKEFPVTFRIINPKAITMGQLYGRFDPV 1994
            .|||.:.:||.:..||:...:.|.:|.:|:  ...|...:       :||||:|..:|:|..:|.
Zfish  2122 AVRHSVFVVGNAGTGKSQVLKSLHRTYQNM--QRRAVWSD-------LNPKAVTNDELFGIINPA 2177

  Fly  1995 SHEWYDGVLAKTFREQV----QGPKGERAWVMFDGPVDAVWIENLNTVLDDNKKLCLMSGEIMQM 2055
            :.||.||:.:...||..    .|||    |::.||.:|.:|||:||||:||||.|.|.|.|.:.:
Zfish  2178 TREWRDGLFSNIMRELANITHSGPK----WIVLDGDIDPMWIESLNTVMDDNKVLTLASNERIPL 2238

  Fly  2056 TKLMNMMFEPADLEQASPATVSRCGMIYMEPSQLGWRALHKSFIN---VLVNKVGLGDIYMTLFE 2117
            ...|.::||.:.|..|:||||||.|::|:.|:.|||..|..|:|:   |...|..|     |:..
Zfish  2239 NPSMRLLFEISHLRTATPATVSRAGILYINPADLGWNPLVSSWIDSREVQSEKANL-----TILF 2298

  Fly  2118 DMTEWLVPAALEFLPQC--------KQMLELSPIYQYQTFSRFFLHFL-------EKHKQFNQAW 2167
            |          ::||.|        |:::.:....|.|...|.....|       :.||..    
Zfish  2299 D----------KYLPSCLDTLRVRFKKIIPVPEQSQVQMLCRLLECLLVPEHTPPDSHKDL---- 2349

  Fly  2168 FQQMFLFCFAWAYCSALTGQGQKTFDALLRKVIYGSNENFPKPKYFSLNRGQMFPEKLLFLDYRF 2232
            ::..|:|...||:                                    .|.||.::|  ||||.
Zfish  2350 YELYFVFAAVWAF------------------------------------GGTMFQDQL--LDYRL 2376

  Fly  2233 DEAENWWT----------------------------WQKSDDSASTTSNFPENAQISELIVPTKE 2269
             |...||.                            |.|...........|    :...:|.|.|
Zfish  2377 -EFSKWWVTEFKSVKFPAQGSVFDYYIDPDSKKFEPWSKMVPKFEMDPEIP----LQACLVHTTE 2436

  Fly  2270 TGYISYWQEFCISKSYAMLVVGPTGTGKSAIITSNLLAMPKFANLVNVINFSARTSAQMVQDTIM 2334
            |..:.|:.:..:.:...:::||..|||||.::...|.::......:..:.|:..||:.|:|..:.
Zfish  2437 TIRVRYFLDRLLERRRPLMLVGNAGTGKSVLVGDKLASLDAEKYTIKNVPFNYYTSSAMLQAVLE 2501

  Fly  2335 SKLDRRRKGVFGPSLGKKCTVFCDDVAMPSKDTYGSQAPLELLRTWLDHGYWSDLVDTTKIELVD 2399
            ..|:::....:||...|:...|.||:.||..|.||:..|..|:|..:|:.:|.|.......|:.:
Zfish  2502 KPLEKKAGRNYGPPGSKRLVYFIDDMNMPEVDEYGTVQPHTLIRQHMDYSHWYDRSKLQLKEIHN 2566

  Fly  2400 MTLMCAMGTLGGSNFIFPRLYRHMFVVAVDSFEDSTIVRIFTTIGDWHF-SKGYPEKVALLSRGL 2463
            :..:..|....||..|.|||.||..|.|:.......:..|:.:|...|. .:.:...|......|
Zfish  2567 VQYVSCMNPTAGSFTINPRLQRHFCVFALSFPGADALHSIYCSILSQHVRGESFSVSVQKSCSQL 2631

  Fly  2464 SEAMVSVYRDAIRSFLPTPAKSHYSFSLRDITRVFQGIVMVPPKRMPDPEKLGRLWAHETYRVFY 2528
            .:..:::::....:||||..|.||.|:|||::.:||||:....:.:..|:.|.:::.||:.||:.
Zfish  2632 VDLALALHQRITTAFLPTAIKFHYIFNLRDLSNIFQGILFCGSECLRTPQDLLKIYLHESSRVYR 2696

  Fly  2529 DRLVDQQDRDRLLVMAVDACKSNLRFPLEQAFGERIEPGEKLTDNDLRNLFYGNYMEPDAEPKFY 2593
            |::::::|......:..|..|.         ..|.::  ..|.:..:.|||. ::.....||: |
Zfish  2697 DKMLEERDFQLFDKLQEDTVKK---------IYEDVD--ALLQETRVMNLFC-HFSAGVGEPR-Y 2748

  Fly  2594 DEGDTYEKLEKLMKYYLREYNSFSSTPMDLVMFRFAIEHVSRVSRVLQMPRGNILMVGMGGSGRR 2658
            ....|:..|...::..|..:|..:.. |.||:|..|:.|:.|:||:|:.||||.|:||:||||::
Zfish  2749 LPVPTWSSLAHTLQEALEAHNELNPA-MSLVLFEDAMAHICRISRILESPRGNALLVGVGGSGKQ 2812

  Fly  2659 SSARLAAYIADCRLMTVQVSKSYTITDWRDDLKKILMSASFNLNHTVFLFSDAQATDEGYVEDIN 2723
            |..||||:|:...:..:.:.|.|:|.|.:.||..:.:.|......||.|.:|||..||.::..:|
Zfish  2813 SLTRLAAFISSLDVFQITLKKGYSIPDLKSDLGSLYIKAGVKNIGTVLLMTDAQVADEKFLVLVN 2877

  Fly  2724 GILNTGDLPNLYQLEDKATIMENMANVAKQLGKILDTLPSEVYAYYIDRIREQLHIALAFSPIGD 2788
            .:|.:|::|:|:..::...|:.::.|..:..| ::|| ....:.::|:|:|.||.:||.|||:|:
Zfish  2878 DLLASGEIPDLFPDDEVENIIGSLRNEVRAQG-LMDT-RDNCWRFFIERVRRQLKVALCFSPVGN 2940

  Fly  2789 SFKERIRVYPSLINCCTIDWYMPWPEEALSRVGVYFVSSMNLNRPHGEETQEPVQSKDAADPDEE 2853
            ..:.|.|.:|:::||..|||:..||:|||..|.:.|:..:...:|   |.:||| ||..|     
Zfish  2941 KLRVRSRKFPAIVNCTAIDWFHEWPQEALESVSLRFLQDLEHIQP---ELKEPV-SKFMA----- 2996

  Fly  2854 EVRRETVGVEREQTQLEADLVDCVMYFHQSVVDASEKCYLELNRRNYVTPSAYLELLKAFRTFYT 2918
                                     |.|.||...|....|...|.||.||.::||.:|.:.....
Zfish  2997 -------------------------YVHVSVNKTSRDYLLNERRYNYTTPKSFLEQIKLYGNLLA 3036

  Fly  2919 RKLDEITRLRDRYTTGLEKLDFAAGQVGEMQTNLYDLQPKLKVLSEETDRIMVNIERETAEAEKK 2983
            .|..::....:|...|||||:....||.:::..|...:.:||:.:|..||::..:..||.:.|::
Zfish  3037 LKKRDLQSKMERLENGLEKLNSTTAQVDDLKAKLAAQEVELKLKNESADRLIQVVGVETEKVERE 3101

  Fly  2984 KEVVGADEAAANEAAAAAQAIKD--DCETDLAEAIPAMEAALEALNTLKPADIFIVKSMKNPPYG 3046
            :.|  ||:.....|..|.:.::.  |||.|||:|.||:.||.||||||...::..:||...|...
Zfish  3102 RAV--ADQEEQKVACIAEEVMRKQRDCEEDLAKAEPALIAAQEALNTLNKNNLTELKSFGAPVSA 3164

  Fly  3047 VKLTMEAVCVIRGIKPDRKPDPSGHMVED-YWGPSMRMLSDM-KFLDSLKTFDKDNIPPPIIKRI 3109
            |.....||.|:..        |.|.:.:| .|..:..|::.: .||::|.||.|:||....:|.|
Zfish  3165 VTNVTAAVMVLTA--------PGGRVPKDRSWKSAKVMMAKVDAFLEALITFKKENIHENCLKAI 3221

  Fly  3110 REKYIADRDFVPEKIKAASMACEGICRW----VRAMDVYDKVARIVMPKKAALAEAEGELSQQME 3170
             :.|:.|.:|.||.:.:.|.|..|:|.|    ||..:||.:|.    ||:.||::|..:|:...|
Zfish  3222 -QPYLQDPEFQPELVASKSNAAAGLCSWVINIVRFYEVYCEVE----PKRQALSKANTDLATAQE 3281

  Fly  3171 KLNAKRAELQVILDKLQKLNDFFAEKSREKKRLEDEIDNCEKKLNRAEKLLGGLGGEKTRWSEAA 3235
            ||...:|::.::.:.|.||...|.:.:.:|.|.:.|.:..|:.:..|.:|:|||..||.||:||.
Zfish  3282 KLAVIKAKITLLNENLAKLTAKFEKATADKLRCQQEAETTERTIALANRLVGGLSLEKVRWAEAV 3346

  Fly  3236 KNLHESISNIVGDVLLAGGCTAYLGYFTTEYRVNILDD-WNALCKRKHIPSSETFSLATTLGHPM 3299
            :...:....:.|||||.....:||||||..||:.::|. |.....:..:|.:|.....:.|....
Zfish  3347 QVFQQQERTLCGDVLLITAFVSYLGYFTKHYRLQLMDHCWRPYLSQLQVPVTEGLDPLSMLTDDA 3411

  Fly  3300 TIRAWSLAGLPADNFSVENGIIVTNSSRYSLLIDPQVQANKWIKNMEKNNNLKVIKQSDANYMQV 3364
            ....|...|||||..|.||..|:::..|:.|::|||:|..:||:| .....|::|:.....|:..
Zfish  3412 DRAVWQNEGLPADRMSTENATILSSCERWPLMVDPQLQGVQWIRN-RYAERLRIIRIGQRGYLDS 3475

  Fly  3365 LELAITFGQPVLIENVGEKLDSNLTPILEKNVIKHKGGLFIKSGDQMIEYNPNFRLYITTCLRNP 3429
            :|.|::.|:.|||||:.|.:|..|.|:|.:..||.  |..||.||:..||||:|||.:.|.|.||
Zfish  3476 IERALSVGEVVLIENLEESVDPVLGPLLGRETIKK--GRCIKIGDKECEYNPSFRLILHTKLANP 3538

  Fly  3430 RYPPEVMVMVTVLNFMITEQGLREQLLAIVVAHERPDLQEKKEQLIIESARNRDALYTIESKILE 3494
            .|.||:....|::||.:|..||.:||||.||:.|||||:|.|..|..:....:..|.|:|..:|.
Zfish  3539 HYQPELQAQCTLVNFTVTRDGLEDQLLAAVVSMERPDLEELKLNLTKQQNGFKITLKTLEDNLLS 3603

  Fly  3495 VLSTSEGNVLEDENAINILSSSKILSEDIQEKQVIAVATEIEIDAARQQYIPVSKHSAILFFCIS 3559
            .||::.||.|.|...:..|.::|..:.:|:.|...|..||.:|:.||:.|.|.:..:::|:|.::
Zfish  3604 RLSSASGNFLGDIELVENLETTKCTAAEIERKVKEAKGTETDINDAREHYRPAAARASLLYFIMN 3668

  Fly  3560 ELANVDPMYQYSLSWFLNLFVNTILKAPKSDQLSERLKNLNDYFTKSIYTNVCRSLFEKDKLVIS 3624
            :|..:.||||:||..|..:|...:.||...:.|.:|:.||.|..|..::....|.|||.|||..:
Zfish  3669 DLNKIHPMYQFSLKAFSVVFQKAVQKAEPDESLKQRVCNLIDSITWCVFQYTTRGLFECDKLTYT 3733

  Fly  3625 LVMCLGILVSQGRVEKAALLFFLTGGIGYKTIPPNPLGAWLPDKSWASVCKAADLEGLKNLPQMM 3689
            ..:...:|:....:....|.|.|...:....|.|..   :|.:.||..:...:.:|...||.:.:
Zfish  3734 AQLAFQVLLMNREISPHELDFLLRYPVQPGLISPVD---FLSNHSWGGIKALSTMEEFHNLDRDI 3795

  Fly  3690 ETYSDEWHNFYDASNPDQLQLPAPHNTVNDMYFLIVIKSLRPDKLVPAVRAFITRNLDRSFVEPP 3754
            |..:..|..|.::..|::.:.|....:...:..|.::::||||::..|||.|:...|..::|...
Zfish  3796 EGSAKRWKKFSESECPEKEKFPQEWKSKTALQRLCMMRALRPDRMTYAVRDFVEEKLGSAYVTGR 3860

  Fly  3755 PFDLAASFADSSPKIPLVFLLSAGSDPMASLFMFAKQ-------RNMYDKLKTISLGQGQGPRAE 3812
            ..|.:.|:.:|....|:.|:||.|.||:..:....::       ||.::    :||||||...||
Zfish  3861 SLDFSVSYEESGSATPMFFILSPGVDPLKDVEKHGRKLGYTFDNRNFHN----VSLGQGQEVVAE 3921

  Fly  3813 KMIMEAARHGQWVVLQNCHVAISWMGDLERICNDTTLTDGANHDYRLWCTSYPSA-----VFPVS 3872
            :.:..|||.|.||:|||.|:...|:|.||:.....  .:|::.|:|::.::.||:     :.|..
Zfish  3922 QALDTAAREGHWVILQNIHLVAKWLGSLEKKLEQH--AEGSHQDFRVFMSAEPSSSPDGHIIPQG 3984

  Fly  3873 VLQNSVKMTNEPPKGLRANMHR---SFTSDPL---MRDKFFTNAFLFSDSANKCWLRGVFALVFF 3931
            :|:|::|:|||||.|:.||:|:   :||.|.|   :|:..|.:.              :|||.:|
Zfish  3985 ILENAIKITNEPPTGMHANLHKALDNFTQDTLEMCVRENEFKSI--------------LFALCYF 4035

  Fly  3932 HAVVQERREFGPLGWNIPYEFNESDLKISLLQLKMFINQSQSIPFRGHVYLTGECNYGGRVTDDK 3996
            ||||.|||:|||.|||..|.||..||.||:..|..::..:..:||....||.||..|||.:|||.
Zfish  4036 HAVVAERRKFGPQGWNRVYPFNTGDLTISVNVLYNYLEANSKVPFDDLRYLFGEIMYGGHITDDW 4100

  Fly  3997 DRRLILSLLNMIYNPNTIEEDNYALSQSGTYRVPLSPTRLNSIEYVSSFPLSPHPEVYGLHENAD 4061
            ||||..:.|.....|..:|.:   |..:..:|:|.:.......:|:.:......|.:||||.||:
Zfish  4101 DRRLCRAYLQEFIRPEMMEGE---LMLAPGFRLPTNTDYSGYHQYIDAALPPESPYLYGLHPNAE 4162

  Fly  4062 INRNVKETNALISGVLLTQTDLMASVKASSSGGAKEDPAIAICKQVLKQLPEEFNIDE----VSK 4122
            |....:.:..|...||..|.  ........:.||:::...|...::|::||||||:.|    |.:
Zfish  4163 IGFLTQTSEKLFRTVLEMQP--RDGGAGDGAAGARDEKVKAALDEILEKLPEEFNMSELMAKVEE 4225

  Fly  4123 TYPVIYTNSMNTVLRQELIRFNRLLSYIRKSLVNVGKAVVGQIAMIPELERTHASMVIGKLPADW 4187
            ..|.:      .|..||..|.|.|...|::||..:...:.|::.|..::|...:::.:.::|..|
Zfish  4226 RSPYV------VVALQECERMNTLTQEIKRSLRELNLGLKGELTMSSDMESLQSALYLDQVPDSW 4284

  Fly  4188 LKKSYPSLKPLGSYVSDLLARLAFFQEW-IDNGEPMVYWISGFYFTQSFITGVLQNYSRKNRFQI 4251
            .:::||||..|..:.|||.:|:...:.| .|...|...|::||:..|||:|.::|..:|:|::.:
Zfish  4285 TRRAYPSLCGLAVWFSDLQSRIRELESWSSDFCLPAAVWLAGFFNPQSFLTAIMQAAARRNQWPL 4349

  Fly  4252 DMILIEFAVT-KFEVQVPGTPDIGAYIRGIFIEGARWNRKTKEVDESFSKVLFDTLPVIYLRPVL 4315
            |.:.::..|| |...:....|..||||.|:::|||||:.:...|.::..|.|...|||::::.|.
Zfish  4350 DRMSLQCDVTKKSREEFSSAPREGAYIHGLYMEGARWDTQAGVVTDARLKELTPALPVLFIKAVP 4414

  Fly  4316 KALEDLPRSTAGGEPETIYDCPVYKTSERRGVLSTTGHSTNFVMYLQLRCSRKPMHWINRGTACL 4380
            ...:|         ..::|.||||||.:|       ||:  .|....|:....|..|...|.|.|
Zfish  4415 VDKQD---------TRSLYQCPVYKTRQR-------GHT--HVWTFSLKTKDNPAKWTLAGVALL 4461

  Fly  4381 CQL 4383
            .|:
Zfish  4462 LQI 4464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnah3NP_647937.2 DHC_N2 1083..1489 CDD:462462 116/493 (24%)
DYN1 <1322..4005 CDD:227570 926/2779 (33%)
AAA_6 1620..1946 CDD:463697 168/325 (52%)
AAA_9 3302..3523 CDD:463702 88/220 (40%)
Dynein_C 4067..4381 CDD:465677 92/319 (29%)
dnah9NP_001353479.1 DHC_N1 194..769 CDD:462457 112/657 (17%)
DHC_N2 1272..1678 CDD:462462 103/412 (25%)
DYN1 1499..4129 CDD:227570 935/2811 (33%)
AAA_6 1812..2138 CDD:463697 168/325 (52%)
MT 3047..3390 CDD:463699 120/357 (34%)
Dynein_C 4167..4462 CDD:465677 92/320 (29%)

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