DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnah3 and Dnah11

DIOPT Version :10

Sequence 1:NP_647937.2 Gene:Dnah3 / 38586 FlyBaseID:FBgn0035581 Length:4385 Species:Drosophila melanogaster
Sequence 2:NP_034190.3 Gene:Dnah11 / 13411 MGIID:1100864 Length:4488 Species:Mus musculus


Alignment Length:4732 Identity:1320/4732 - (27%)
Similarity:2150/4732 - (45%) Gaps:800/4732 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KLRRKRTLHLPRVSQ----------AQKKGEKRQLNDCPFYNLTYGFDQLPL---DPVKEFLQEK 72
            |:.|:..|.:|.:::          .:.:.::|:        :.:..:.|.:   ..::|.:::.
Mouse   186 KMSRRTHLPIPTIAENIDLDQHYLVTRPQSDERR--------ILHAIESLVIKWSHQIQEIIEKD 242

  Fly    73 ISHMQTDKIVGHCNREFDFHRYDLDNVKDEYDECDDDSLQELQLEDIIMPEQFEMLRDAKDHLYN 137
            .:|.....:......|.||.....||:|..|.          ||:..|:.:..::||..:.    
Mouse   243 SAHPLLSGLHPTPETELDFWTMRHDNLKCIYS----------QLQAPIVLKMVKILRTRQS---- 293

  Fly   138 FDSTACNQFPWIDKWMTGVRPSEQEIYEMTSHLLEI-----------YCNRRVRIFYPGCGTSSS 191
                  :..|.:....|.|..:..|..::..||..:           :...|: :..|...|...
Mouse   294 ------SYLPALKGIFTTVENALLEAQDVELHLRPLRRHIHSLQEAEFPQTRI-LIAPLLHTICL 351

  Fly   192 LWTNQLRRQHGSPSELIGAYRTPSARHMRVNNMRGPPKKEKFTAGDHYAFRTPQECRNELMRVGK 256
            :|::.  :.:.:|:.:|...:  ...::.::..|              |:.:|:    :|:: |:
Mouse   352 IWSHS--KFYNTPARVIVLLQ--EFCNLFIDQAR--------------AYLSPE----DLLK-GE 393

  Fly   257 IIDELIE-----PVLKAAEH---KIGHGLTKYPDPPSCKDNTNRILRSAGILVGKKKNCYVGKC- 312
            |.|.|.:     .|||..::   |...|||.|    ..::...|.......||..:.|.::.:. 
Mouse   394 IEDALEKVQVAISVLKTFQNSFFKYRKGLTSY----FTRNTEQRSWDFQSHLVFGRFNKFLDRLV 454

  Fly   313 -------------RIHRKDF-------------ATNEEFLRCLKRMEATHFPYMQPLQPVDPDDQ 351
                         ::.|.:|             :|:|||:.|.|..:.:.:      .|.|.||.
Mouse   455 KIEDMFVTILEFEKLERLEFGGSKGAVLNAQIHSTSEEFIECCKVFQQSTY------DPSDCDDM 513

  Fly   352 KI---------------KMLAKYRVE-------LARAEKLFTL------------KIQKRYQCLL 382
            :.               :.|.....|       |..|.||.|:            .....|..||
Mouse   514 EFESDYFKFKSRTLDFDRRLGTLLCEGLSNCSGLESAFKLLTIFGNFLEKPVVMEMFSPHYSTLL 578

  Fly   383 KSMSI---VQLATYPSHLIRKAFRRINPRSALLQDAYQFI---VKEKRDWPKLPPEVILM----- 436
            ...:.   |....|..|:     ::|.....:|.....|.   :|    |.::..|.:.|     
Mouse   579 NMFNAELDVCKQLYDEHM-----KQIEHGHEILNKNMPFTSGNIK----WARMLLERLQMFWSNF 634

  Fly   437 ---DYLF---VGDRGVRQDLAILIIV-------------------CLIDLQEDFRHYVKRSFLNY 476
               .|||   ..:..|.|..|.:..:                   |..:|.:..   ||.|.:|.
Mouse   635 TSLHYLFPDSPDEAAVCQKYAEMTTLLDQFESHIYSEWRRNVDETCEFNLNQPL---VKFSPING 696

  Fly   477 LLSSNMERRRLQLEREPPEFPILTISPPVSWRSNLLRGKARIGEVLMTTHPTVQALNRLWHDLYE 541
            |||.|.:.:.:.:.||.....:|..|........:.:.:..|.:.:......||..|:|...|.|
Mouse   697 LLSVNFDPKLVAVLREVKYLLMLKKSDIPDSALGIFQKRNIILKYIGNLELLVQGYNKLKQTLLE 761

  Fly   542 ---DLVVVDLG----QLLLAQRPLD-ADTVQVFIEK--------SC--ADVRDLLLN-------- 580
               .|:..:||    ||.:|...|. .|...|::|:        .|  :..:..:|.        
Mouse   762 VEYPLIEDELGAIDEQLRVAATWLTWQDDFWVYMERVQVATAELECRVSQTQSNMLTIQQTMQAW 826

  Fly   581 -DW--LPRCADLMNEMRGTWKDLVPMSGKYGGRAAMLFR---C-IHSAMSRHLN------SLISK 632
             :|  ||| .:...|...|..|    .|....:...|.|   | ||:.:..:..      ||.|.
Mouse   827 AEWPLLPR-RETRREAALTLDD----KGDLFAKKYKLIREDGCKIHNLVEENRKLFRADPSLDSW 886

  Fly   633 SINYLFKVLCAFKG----------------GNRIEKYSMFDAKLKRIP----------------L 665
            .|...|......:|                ..:::....|.|::..:|                .
Mouse   887 KIYVEFIDDIVVEGFFQAILHDLDFFLRNTEKQLKPTPFFQAQMLLMPPEIVFKPPLEKEAGDGF 951

  Fly   666 MTLIASVVGAHFDHEPINMGPGVRPASNIYV--YDEDDADPFQQPQVNQFVENVPDIDDVAQFEL 728
            ..|:..::...| .....||   |.|:::.:  |..|..:.....:|.|.:.|  .:.||....|
Mouse   952 YDLVEEMLCGSF-RVSAQMG---RVAAHLDIADYQNDMDNMLGLAEVRQEIMN--RVADVINKVL 1010

  Fly   729 DHSNKLYIYPYMQELPRIFTEHFKSILAVGYEIPRLEFVMSGGEPETKGFLHFIDEDHVDFLELC 793
            :..:.|..|.|:....|:  |..:..|..|:.:|..|......|               |.|: .
Mouse  1011 EFRSSLETYSYLWVDDRV--EILRQFLLYGHAVPSEEMDAPASE---------------DILQ-P 1057

  Fly   794 EKVEQIVKVNWQGVHVYLKPVYKYYFGLFQKLILPMVQKVWTENNLPELGAVQELLKKLQAVSDT 858
            ..:||                :|....:::.|.:.|.:                           
Mouse  1058 PTLEQ----------------FKEQIDIYEALYIQMSK--------------------------- 1079

  Fly   859 TYYLRDFIPLN-LFMLDNRHVKLSLR--------MYVREIYDFIID-------FYKALNWNENRA 907
               ..||...| .|.:|.|..||||.        |:...:..|::|       |.|..|....|.
Mouse  1080 ---FDDFRVFNSWFKVDMRPFKLSLLNVIKKWSWMFQEHLLRFVVDSLSELQGFIKQTNAGLQRQ 1141

  Fly   908 ICE-------ELEEMSMKAGERPEETPE--------VVALQNYINDCREMRIFAIKDEIK---NV 954
            :||       ::....:....|...|.|        ::.|::|.....| :::|..:|:.   ..
Mouse  1142 LCEGDHDGLVDIMGHLLAVRSRQRATDELFEPLKETIMLLESYGQKMPE-QVYAQLEELPERWET 1205

  Fly   955 LKRVVFLLTHTYLSSDELHLNSRTFILPGELEEVLDLSAARLAVVR------DNLELALRERRME 1013
            .|::..::.|                      ||..|..|.:.::|      |..:...|||...
Mouse  1206 TKKIAAMVRH----------------------EVSPLQNAEVTLIRKKCILFDEKQAEFRERFRS 1248

  Fly  1014 FEKLLAQEKRTMDGFRIREIRDVLTLEELKERVDTVDLLFTTIENLSREAKAINTEETLLQIDVS 1078
            :..|         ||:......||            |.....:|.|..|.:.:.....|.::.:.
Mouse  1249 YAPL---------GFKAENPYAVL------------DKANQELEALEEEMEQMQNSARLFEVALP 1292

  Fly  1079 AFPLLAEIIEKMEPIEKLWKTSYEFEKDYLIWMFERFECLNADGVREQVENMHKIMYKLSRQLAY 1143
            .:..:.:..:::..::.||        |.:|:            ||..::|..:..:   ||:  
Mouse  1293 EYKQMKQCRQEIRLLKGLW--------DVIIY------------VRRSIDNWTETQW---RQI-- 1332

  Fly  1144 NPVAKRAAEQMRMKIEKFRVYLPVLDSICR-----HGLE----------------------KRHW 1181
                  ..|||.:::.:|...:..||...|     .|||                      .|||
Mouse  1333 ------NVEQMDLELRRFAKEIWSLDKAVRVWDAYSGLEGTVKDMTTSLRAIAELQNPALRDRHW 1391

  Fly  1182 DQISKILGRKVNPKLFPTLKDMIDVDIMSILPQLEEIANAAGKEYDLNNGLRIMQADWRDVMFEV 1246
            .|:.|.:|.:.:.....||.|::.|.:..:...:.:|.:.|.||......:..:...|..:.|..
Mouse  1392 QQLMKAIGVRFSINDSTTLSDLLAVQLHRVEDDVRDIVDQAVKELGTEKVITDVSHTWEALEFSY 1456

  Fly  1247 LQYRDSDTHILASLDDIQTLLDDHIMRTQAMKRSPFITALGSKADDWEARLLLIQNIIDAWTQVQ 1311
            ..:..:.|.:|.|.:.:...|:.:.::.|::.:|.::.....:...|:.:|.:...:|..|.|||
Mouse  1457 EAHHRTGTPLLKSDEQLFETLEHNQVQLQSLLQSKYVEYFIEQVLSWQNKLNVADAVIFTWMQVQ 1521

  Fly  1312 ITWMYLEPIF-SSEDIMRQMPLEGRNFKAVDKLWRKIMKHTLKDRHVMAATEYPEMLEVFTKAIE 1375
            .||.:||.|| .||||..|:..:.|.|..||..::::|..|.|.::|:.||..|.:.|.......
Mouse  1522 RTWSHLESIFVCSEDIRVQLVEDARRFDKVDAEFKELMFETAKVKNVLEATCRPHLYEKLKDFQH 1586

  Fly  1376 DLETVTKGLNTYLEQKRLFFARFFFLSNDELLEILSETKDPMRVQPHLRKCFEGIGSLTFDDNME 1440
            .|....|.|..|||.||:.|.||:|:|:.:||:|||:...|.:|..||.|.|:.|..|.|:||::
Mouse  1587 RLSLCEKALAEYLETKRVTFPRFYFISSADLLDILSKGAQPKQVTHHLVKLFDSISDLQFEDNLD 1651

  Fly  1441 I-----VEMVSDEEERVALVRKINPQLAN----GLVEMWLKEVEMVMLDSVKEQMREAWEDYAMV 1496
            :     |.|.|.|:|.|       |..|.    |.||.||.::|..|.|:|:..:.||...|...
Mouse  1652 VSTHKAVGMFSKEKEYV-------PFQAGCECIGHVESWLLQLEQTMKDTVRLAITEAITAYEEK 1709

  Fly  1497 ERISWVVSWPGQVVQGISCMAWTYEV-------EEAIETKELPAYLEKSNLQIADLVQLVRTDLQ 1554
            .|..|:..:|.||....|.:.||.:|       ||..|| .|..:.:|...|:..|:.|:..:|.
Mouse  1710 PRELWIFDFPAQVALTGSQIWWTTDVGIAFSRLEEGYET-ALKDFHKKQISQLNTLITLLLGELS 1773

  Fly  1555 AGVRIAVEALIVLDVHDRDVVKYLTDCRITNIQDFDWISQLRYYWKVNEKNEDWVC-VSMVVTDV 1618
            .|.|..|..:..:|||.||||..|...::.:...|.|:||||:.|:.:.|:    | |::.....
Mouse  1774 PGDRQKVMTICTIDVHARDVVAKLISQKVVSPHAFTWLSQLRHEWEDSRKH----CVVNICDAHF 1834

  Fly  1619 EYGMEYLGNLPRLVVTPLTDRCYRTLMGALKLCLGGAPEGPAGTGKTETCKDLAKAVAKKCVVFN 1683
            :|..|||||.||||:||||||||.||..:|.|.:.|||.||||||||||.|||.:|:.....|||
Mouse  1835 QYFYEYLGNSPRLVITPLTDRCYITLTQSLHLTMSGAPAGPAGTGKTETTKDLGRALGMMVYVFN 1899

  Fly  1684 CSDGLDYKALGKFFKGLAQSGAWACFDEFNRIELEVLSVVAQQILTIQRAI--GRKVVKFFFEDT 1746
            ||:.:||:::|..:|||.|:|||.||||||||.:|||||||.|:..|..||  |||  :|.|...
Mouse  1900 CSEQMDYRSIGNIYKGLVQTGAWGCFDEFNRIAVEVLSVVAVQVKMIHDAIRNGRK--RFVFLGE 1962

  Fly  1747 MLKLDPTCSIFITMNPGYAGRTELPDNLKVLFRTVAMMVPDYAMIGEITLYSNGFDMARNLSQKI 1811
            .:.|.|:..||||:|||||||||||:|||.|||..||:.||..:|.||.|.:.||..||:|::|.
Mouse  1963 TIPLKPSVGIFITLNPGYAGRTELPENLKALFRPCAMVAPDTELICEIMLVAEGFVDARSLARKF 2027

  Fly  1812 VQAYKLCSEQLSSQSHYDYGMRAVKSVLLASASLRRLYVDLPEPEIVLRAIVDVNLPKFLEQDIS 1876
            :..|.||.|.||.|.|||:|:||:||||:.:.||:|...:.||.::::||:.|.|:||.:..|:.
Mouse  2028 ISLYTLCEELLSKQDHYDWGLRAIKSVLVVAGSLKRGDKNRPEDQVLMRALRDFNMPKIVTDDVP 2092

  Fly  1877 LFIGIYMDLFPGVELPMPQRGDILKWLHINLADRNLQATPWYLEKILQIYEMLLVRHGLMIVGGS 1941
            :|:|:..||||.:::|..::....:.:..:..:..||....::.|::|:.|:|.|||.:.:||.:
Mouse  2093 VFLGLVSDLFPALDVPRQRKPHFEQMVKQSTLELRLQPEESFILKVVQLEELLAVRHSVFVVGNA 2157

  Fly  1942 MGGKTTAYQVLAQTLRNVSTDEEATLKEFPVTFRIINPKAITMGQLYGRFDPVSHEWYDGVLAKT 2006
            ..||:...:.|.:|..|        :|:.|| :..:||||:|..:|:|.....:.||.||:.:..
Mouse  2158 GTGKSKILRTLNRTYVN--------MKQKPV-WSDLNPKAVTTDELFGFIHHATREWKDGLFSSI 2213

  Fly  2007 FREQV----QGPKGERAWVMFDGPVDAVWIENLNTVLDDNKKLCLMSGEIMQMTKLMNMMFEPAD 2067
            .|||.    .||    .|::.||.:|.:|||:||||:||||.|.|.|.|.:.:...|.::||...
Mouse  2214 LREQANLTHDGP----TWIVLDGDIDPLWIESLNTVMDDNKVLTLASNERVALKPSMRLLFETHH 2274

  Fly  2068 LEQASPATVSRCGMIYMEPSQLGW---------RALHKS-----------FINVLVNKVGLGDIY 2112
            |..|:||||||.|::|:.|..|||         |..|:|           :|.|.:.|:      
Mouse  2275 LRTATPATVSRAGILYVNPQDLGWNPYVASWIDRRRHQSEKANLTILFDKYIPVCLEKL------ 2333

  Fly  2113 MTLFEDMTEWLVPAA---------LEFLPQCKQMLELSPIYQYQTFSRFFLHFLEKHKQFNQAWF 2168
            .|.|:.:|.  ||.:         ||.|...:.:...||...|:.:                   
Mouse  2334 RTSFKAITS--VPESSLVQTICTLLECLLTPENIPPDSPKETYEVY------------------- 2377

  Fly  2169 QQMFLFCFAWAYCSALTGQGQKTFDALLRKVIYGSNENFPKPKYFSLNRGQMFPEKLLFLDYRFD 2233
               |.|...|.:..           .|||..:.....:|.:..:..: :...||.:....||..|
Mouse  2378 ---FAFACVWTFGG-----------TLLRDQLSDYQADFSRWWHKEM-KAVKFPSQGTIFDYYLD 2427

  Fly  2234 -EAENWWTWQKSDDSASTTSNFPE-----NAQISELIVPTKETGYISYWQEFCISKSYAMLVVGP 2292
             :.:.:..|         |...|:     :|.:..::|.|.||..:.|:.|..:.|...:::||.
Mouse  2428 HKTKKFLPW---------TDKVPQFSMDADAPLKTVLVHTPETTRLRYFTELLLCKGKPIMLVGN 2483

  Fly  2293 TGTGKSAIITSNLLAMPKFANLVNVINFSARTSAQMVQDTIMSKLDRRRKGVFGPSLGKKCTVFC 2357
            .|.||: :..||.||......:|:.:.|:..|::..:|..:...|:::....:||...||...|.
Mouse  2484 AGVGKT-VFLSNTLASLSENYIVSCVPFNYYTTSAALQRILEKPLEKKAGRNYGPKGNKKLVYFI 2547

  Fly  2358 DDVAMPSKDTYGSQAPLELLRTWLDHGYWSDLVDTTKIELVDMTLMCAMGTLGGSNFIFPRLYRH 2422
            ||:.||..|.||:..|..|||..:|:|:|.|.......|:.:...:..|..:.||..:.|||.||
Mouse  2548 DDLNMPEVDLYGTIQPHALLRQHIDYGHWYDRHKIMLKEIRNCQYVACMNPMVGSFTVNPRLQRH 2612

  Fly  2423 MFVVAVDSFEDSTIVRIFTTIGDWHF-SKGYPEKVALLSRGLSEAMVSVYRDAIRSFLPTPAKSH 2486
            ..|.|.:......:..|:..|..::. .:.:...|......|.:|.::.::....||:||..|.|
Mouse  2613 FTVFAFNFPSLDALTTIYGQIFSFYLQQQAFCPSVLRAGPSLIQATIAFHQMMAESFVPTAIKFH 2677

  Fly  2487 YSFSLRDITRVFQGIVMVPPKRMPDPEKLGRLWAHETYRVFYDRLVDQQDRD----RLLVMA--- 2544
            |:|:|||::.:||||:...|:.:...|.|.|||.|||.||:.|||:|..|.|    ::|..|   
Mouse  2678 YNFNLRDLSNIFQGILFASPECLKSLEDLARLWLHETSRVYGDRLIDTNDFDLFQRKMLETAHKY 2742

  Fly  2545 ---VDACKSNLRFPLEQAFGERIEPGEKLTDNDLRNLFYGNYMEPDAEPKFYDEGDTYEKLEKLM 2606
               ||| .:.||.|                      |.|.::.....:|.:....| :|.|:.::
Mouse  2743 FKGVDA-NALLRQP----------------------LVYCHFASGGEDPCYMPVKD-WEGLKAVL 2783

  Fly  2607 KYYLREYNSFSSTPMDLVMFRFAIEHVSRVSRVLQMPRGNILMVGMGGSGRRSSARLAAYIADCR 2671
            ...:..||...|. |.||:|..|::||.|:||:|::|:|:.|::|:||||::|.:||||||....
Mouse  2784 MEMVDNYNELHSA-MHLVLFEDAMQHVCRISRILRIPQGHALLIGVGGSGKQSLSRLAAYICSLE 2847

  Fly  2672 LMTVQVSKSYTITDWRDDLKKILMSASFNLNHTVFLFSDAQATDEGYVEDINGILNTGDLPNLYQ 2736
            :..:.:::.|...:.|.||..:.:........||||.:||...||.::..||.:|.:||:|:|:.
Mouse  2848 VFQITLTEGYGAQELRVDLANLYVRTGAKNMPTVFLLTDAHVLDESFLVLINDLLASGDIPDLFS 2912

  Fly  2737 LEDKATIMENMANVAKQLGKILDTLPSEVYAYYIDRIREQLHIALAFSPIGDSFKERIRVYPSLI 2801
            .||...|:..:.|..:.|| ::|: ....:|:::.|:|:||.:...|||:|.:.:.|.|.:|:::
Mouse  2913 DEDMDKIISGIRNEVRGLG-LVDS-RENCWAFFLARVRQQLKMVFCFSPVGHTLRVRARKFPAIV 2975

  Fly  2802 NCCTIDWYMPWPEEALSRVGVYFVSSMNLNRPHGEETQEPVQSKDAADPDEEEVRRETVGVEREQ 2866
            ||..|||:..||:|||..|...|:                           ||:.    |:|.: 
Mouse  2976 NCTAIDWFHEWPQEALVSVSRRFI---------------------------EEIE----GIEPQ- 3008

  Fly  2867 TQLEADLVDCVM-YFHQSVVDASEKCYLELNRRNYVTPSAYLELLKAFRTFYTRKLDEITRLRDR 2930
               ..|.:...| :.|.||.:.|...|....|.||.||.::||.:..|::...:|.:|:.:.::.
Mouse  3009 ---HKDSISLFMAHVHTSVKEVSAWYYQNERRYNYTTPRSFLEQISLFKSLLKKKREEVKQKQEH 3070

  Fly  2931 YTTGLEKLDFAAGQVGEMQTNLYDLQPKLKVLSEETDRIMVNIERETAEAEKKKEVVGADEAAAN 2995
            ...|::||...|.|||.:::.|...:.:|::.:.:.:.::..|..:|.:..::|.:..|:|....
Mouse  3071 LGNGIQKLQTTASQVGNLKSRLASQEAELQLRNLDAEALITKIGLQTEKVSREKAIADAEERKVA 3135

  Fly  2996 EAAAAAQAIKDDCETDLAEAIPAMEAALEALNTLKPADIFIVKSMKNPPYGVKLTMEAVCVIRGI 3060
            .....|...:.:||.||.:|.||:.||.:|||||...::..:|:..|||..|.....||.|:.. 
Mouse  3136 AIQTEASQKQRECEADLLKAEPALVAAKDALNTLNRVNLTELKTFPNPPNAVTNVTAAVMVLLA- 3199

  Fly  3061 KPDRKPDPSGHMVED-YWGPS---MRMLSDMKFLDSLKTFDKDNIPPPIIKRIREKYIADRDFVP 3121
                   |.|.:.:| .|..:   |..:.|  ||.:|..:||::||...:|.:.|:|:.|.:|.|
Mouse  3200 -------PRGRVPKDRSWKAAKIFMGKVDD--FLQALINYDKEHIPENCLKVVNEQYLKDPEFNP 3255

  Fly  3122 EKIKAASMACEGICRWV----RAMDVYDKVARIVMPKKAALAEAEGELSQQMEKLNAKRAELQVI 3182
            ..|:..|.|..|:|.||    |..:||..|.    ||:.|||:...:|:...|||.|.|.:|..:
Mouse  3256 NLIRTKSFAAAGLCAWVINIIRFYEVYCDVE----PKRQALAQTNLDLAAATEKLEAVRRKLVDL 3316

  Fly  3183 LDKLQKLNDFFAEKSREKKRLEDEIDNCEKKLNRAEKLLGGLGGEKTRWSEAAKNLHESISNIVG 3247
            ...|.:|...|.:.:.||.|.::|::...|.::.|.||:..|..||.||.::.|:.......:.|
Mouse  3317 DHNLSRLTASFEKATAEKVRCQEEVNQTNKTIDLANKLVSELESEKIRWGQSIKSFETQEKTLCG 3381

  Fly  3248 DVLLAGGCTAYLGYFTTEYRVNILD-DWNALCKRK-HIPSSETFSLATTLGHPMTIRAWSLAGLP 3310
            ||||.....:|:|.||.:||..::| .|....::| .||.:|...|...|....||..|:..|||
Mouse  3382 DVLLTAAFVSYIGSFTRQYRQELVDCKWIPFLQQKVSIPIAEGLDLIAMLTDDATIATWNNEGLP 3446

  Fly  3311 ADNFSVENGIIVTNSSRYSLLIDPQVQANKWIKNMEKNNNLKVIKQSDANYMQVLELAITFGQPV 3375
            :|..|.||..|:|:..|:.|:||||.|..||||| :...:|||.......::..:|.|:.||..:
Mouse  3447 SDRMSTENATILTHCERWPLMIDPQQQGIKWIKN-KYGPDLKVTHLGQKGFLNTIETALAFGDVI 3510

  Fly  3376 LIENVGEKLDSNLTPILEKNVIKHKGGLFIKSGDQMIEYNPNFRLYITTCLRNPRYPPEVMVMVT 3440
            ||||:.|.:|..|.|:|.:|..|.  |.||:.||:..|:|.||||.:.|.|.||.|.||:....|
Mouse  3511 LIENLKETVDPVLGPLLGRNTTKK--GKFIRIGDKECEFNKNFRLILHTKLANPHYKPELQAQTT 3573

  Fly  3441 VLNFMITEQGLREQLLAIVVAHERPDLQEKKEQLIIESARN--RDALYTIESKILEVLSTSEGNV 3503
            :|||.:||.||..||||.||:.|||||:..|  |::...:|  :..|..:|..:|..||.:||:.
Mouse  3574 LLNFTVTEDGLEGQLLAEVVSIERPDLERLK--LVLTKQQNDFKIELRQLEDDLLLRLSAAEGSF 3636

  Fly  3504 LEDENAINILSSSKILSEDIQEKQVIAVATEIEIDAARQQYIPVSKHSAILFFCISELANVDPMY 3568
            |:|.:.:..|.::|..:.:|:.|...|...|.:|:..|:.|.||:..:::|:|.||:|..::|:|
Mouse  3637 LDDTDLVERLETTKATAAEIEHKVTEARENERKINETRECYRPVAARASLLYFVISDLRRINPVY 3701

  Fly  3569 QYSLSWFLNLFVNTILKAPKSDQLSERLKNLNDYFTKSIYTNVCRSLFEKDKLVISLVMCLGILV 3633
            |:||..|..||...|.:|.|.:...||:..|.:..|.:.:....::|||:|||.....|...||:
Mouse  3702 QFSLKAFNTLFHRAIEQADKVEDTQERICALIESITHATFLYASQALFERDKLTFLSQMAFQILL 3766

  Fly  3634 SQGRVEKAALLFFLTGGIGYKTIPPNPLGAWLPDKSWASVCKAADLEGLKNLPQMMETYSDEWHN 3698
            .:..:....|.|.|...:.:....|..   :|..:||::|...|.:|..:.|.:.:|..:.:|..
Mouse  3767 RRNEIHPLELDFLLRFTVEHTYSSPVD---FLTAQSWSAVKAVALMEEFRGLDRDVEGSAKQWRK 3828

  Fly  3699 FYDASNPDQLQLPAPHNTVNDMYFLIVIKSLRPDKLVPAVRAFITRNLDRSFVEPPPFDLAASFA 3763
            :.::..|::.:||......:.:..||:::::|||::..|:|.|:...|...:||....||..:|.
Mouse  3829 WVESECPEKEKLPQEWKKKSLIQKLIILRAVRPDRMTYALRNFVEEKLGAKYVERTRLDLGKAFE 3893

  Fly  3764 DSSPKIPLVFLLSAGSDPMASLFMFAKQRNM---YDKLKTISLGQGQGPRAEKMIMEAARHGQWV 3825
            :|||..|:.|:||.|.|.:..|.:..|:...   ..|...:||||||...||..:.:||..|.||
Mouse  3894 ESSPSTPVFFILSPGVDALKDLEVLGKRLGFTIDSGKFHNVSLGQGQELVAEMAMEKAAAGGHWV 3958

  Fly  3826 VLQNCHVAISWMGDLERICNDTTLTDGANHDYRLWCT--SYPS---AVFPVSVLQNSVKMTNEPP 3885
            :|||.|:...|:|.||::..  ..:.|::.|||::.:  :.||   .:.|..:|:||:|:|||||
Mouse  3959 ILQNVHLVAKWLGTLEKLLE--KFSQGSHRDYRVFLSAETVPSQHEPIIPQGLLENSIKITNEPP 4021

  Fly  3886 KGLRANMHR---SFTSDPL---MRDKFFTNAFLFSDSANKCWLRGVFALVFFHAVVQERREFGPL 3944
            .|:.||:|.   :|..|.|   .:|:.|.:.              :|:|.:|||.|..|..|||.
Mouse  4022 TGMLANLHAALYNFDQDTLEMCSKDQEFKSI--------------LFSLCYFHACVAGRLRFGPQ 4072

  Fly  3945 GWNIPYEFNESDLKISLLQLKMFINQSQSIPFRGHVYLTGECNYGGRVTDDKDRRLILSLLNMIY 4009
            ||:..|.|:..||.|....|..::..:.::|:....||.||..|||.:||..||:|....|....
Mouse  4073 GWSRSYPFSPGDLTICTNILYNYLEANPNVPWEDLRYLFGEIMYGGHITDAWDRKLCRVYLEEFM 4137

  Fly  4010 NPNTIEEDNYALSQSGTYRVPLSPTRLNSIEYVSSFPLSPHPEVYGLHENADINRNVKETNALIS 4074
            ||:.||::  .:...|....|.|... ...:|:........|.:||||.||:|......:|.|..
Mouse  4138 NPSLIEDE--VMLAPGFAAPPYSDYS-GYHQYIEDTLPPESPALYGLHPNAEIELLTVTSNTLFR 4199

  Fly  4075 GVLLTQTDLMASVKASSSGGAKEDPAIAICKQVLKQLPEEFNIDEVSKTYPVIYTNSMNTVL--R 4137
            .:|..|.  ..:|.....|.:.||....|...:|::||||||:.|:.:..|    |....||  .
Mouse  4200 TLLEMQP--RNAVSQEELGQSTEDKVKNILDDILERLPEEFNMAEIMQKNP----NRSPYVLVCF 4258

  Fly  4138 QELIRFNRLLSYIRKSLVNVGKAVVGQIAMIPELERTHASMVIGKLPADWLKKSYPSLKPLGSYV 4202
            ||..|.|.|:..||.||.::...:.|::.:.|::|...:::...::|..|.|.:|||...|..:.
Mouse  4259 QECERMNVLIREIRVSLQHLDLGLKGELTLSPDVETQLSALSYDRVPDTWNKLAYPSTYGLAQWF 4323

  Fly  4203 SDLLARLAFFQEWI-DNGEPMVYWISGFYFTQSFITGVLQNYSRKNRFQIDMILIEFAVTKFEVQ 4266
            :|||.|......|. |...|.|.|:|||:..|||:|.::|..:|||.:.:|.:.:...|||...:
Mouse  4324 NDLLLRCRELDTWTQDLTLPAVVWLSGFFNPQSFLTAIMQTMARKNEWPLDRMCLTIDVTKKTKE 4388

  Fly  4267 VPG-TPDIGAYIRGIFIEGARWNRKTKEVDESFSKVLFDTLPVIYLRPVLKALEDLPRSTAGGEP 4330
            ..| .|..|||:.|:.:|||||:.::..:.::..|.|...:|||:.:.|....:::..:      
Mouse  4389 DYGHPPREGAYLHGLHLEGARWDIQSGALVDARLKELTSMMPVIFAKAVPVDRQEIKHA------ 4447

  Fly  4331 ETIYDCPVYKTSERRGVLSTTGHSTNFVMYLQLRCSRKPMHWINRGTACLCQ 4382
               |:||||||..|         ...:|...:||...:...|:..|.|.|.:
Mouse  4448 ---YECPVYKTKAR---------GPTYVWTFRLRSKDRIAKWVLAGVALLLE 4487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnah3NP_647937.2 DHC_N2 1083..1489 CDD:462462 117/442 (26%)
DYN1 <1322..4005 CDD:227570 929/2778 (33%)
AAA_6 1620..1946 CDD:463697 163/327 (50%)
AAA_9 3302..3523 CDD:463702 91/222 (41%)
Dynein_C 4067..4381 CDD:465677 95/317 (30%)
Dnah11NP_034190.3 DHC_N1 221..792 CDD:462457 114/636 (18%)
DHC_N2 1297..1702 CDD:462462 117/442 (26%)
DYN1 1524..4138 CDD:227570 935/2792 (33%)
AAA_6 1836..2162 CDD:463697 163/327 (50%)
MT 3069..3413 CDD:463699 109/357 (31%)
Dynein_C 4191..4486 CDD:465677 95/318 (30%)

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