DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13708 and LRRC46

DIOPT Version :10

Sequence 1:NP_647933.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_219481.1 Gene:LRRC46 / 90506 HGNCID:25047 Length:321 Species:Homo sapiens


Alignment Length:399 Identity:82/399 - (20%)
Similarity:127/399 - (31%) Gaps:149/399 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 LPSLSVLLLGKNRITDIGGLSSLKDTLRVLDLHGNKLTSLGSRINCLQQLKSLNLAGNQIRQINQ 555
            |..|..:.|.:..||.|..|..|:: |..|.|.|||:..: ..:.|:..|:.|:||||||||:  
Human    43 LDELQTVRLDREGITTIRNLEGLQN-LHSLYLQGNKIQQI-ENLACIPSLRFLSLAGNQIRQV-- 103

  Fly   556 QDFLGLRCLRELNLKRNKLRRINGFQHLVALERLWLCHNDLHRVDDMASIARATRLLEVTIENNP 620
            ::.|.|.||:.|:|..|.:..:                    ::|:...     .||.:.:..|.
Human   104 ENLLDLPCLQFLDLSENLIETL--------------------KLDEFPQ-----SLLILNLSGNS 143

  Fly   621 VSLAGDCVSFLVSYLPLLQTLSQMPITEQVRRAALAWRQHKEQAQAAPGSSEAYHNIRREEVISN 685
            .:........:...||||..|...|:.|:       |...:|...:   |.|.:..:        
Human   144 CTNQDGYRELVTEALPLLLDLDGQPVVER-------WISDEEDEAS---SDEEFPEL-------- 190

  Fly   686 ARTNWELLRSQQTVVGRPKSRLTSELAKINESNEGP-AGEEG---EMESE-----ESQQPKELMD 741
                                             .|| ..|.|   |:|.|     |.:|...|.:
Human   191 ---------------------------------SGPFCSERGFLKELEQELSRHREHRQQTALTE 222

  Fly   742 ELQALIKLPPIAKDLRNPHEEDGASSEASSLGPNVDSCSSCYSSDNEDGGAKNKPQTPQIDENSN 806
            .|..: ::.|...||                                       |..|       
Human   223 HLLRM-EMQPTLTDL---------------------------------------PLLP------- 240

  Fly   807 KVGLTEKPPSSPVTVASQSPEVAIVTPSAPVSSSPSPPALTLTP-----------PAAPGTPVPG 860
              |:.....|||....:|..|......|:|.:|||:....:|.|           .|...|....
Human   241 --GVPMAGDSSPSATPAQGEETVPEAVSSPQASSPTKKPCSLIPRGHQSSFWGRKGARAATAPKA 303

  Fly   861 TTSPSPSTT 869
            :.:.:||||
Human   304 SVAEAPSTT 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13708NP_647933.1 leucine-rich repeat 449..471 CDD:275380
PPP1R42 467..661 CDD:455733 44/169 (26%)
leucine-rich repeat 472..493 CDD:275380 1/1 (100%)
leucine-rich repeat 494..516 CDD:275380 7/21 (33%)
leucine-rich repeat 517..539 CDD:275380 7/21 (33%)
leucine-rich repeat 540..563 CDD:275380 12/22 (55%)
leucine-rich repeat 564..585 CDD:275380 4/20 (20%)
leucine-rich repeat 611..637 CDD:275380 4/25 (16%)
LRRC46NP_219481.1 LRR 1 45..66 6/20 (30%)
leucine-rich repeat 46..67 CDD:275378 7/20 (35%)
PPP1R42 56..>146 CDD:455733 33/118 (28%)
LRR 2 67..88 7/22 (32%)
leucine-rich repeat 68..89 CDD:275378 7/21 (33%)
LRR 3 89..110 11/22 (50%)
leucine-rich repeat 90..111 CDD:275378 12/22 (55%)
LRR 4 111..132 6/40 (15%)
leucine-rich repeat 112..133 CDD:275378 5/45 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 235..321 23/126 (18%)
DedD 237..>320 CDD:442381 21/85 (25%)
Blue background indicates that the domain is not in the aligned region.

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