DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13708 and AT4G34280

DIOPT Version :10

Sequence 1:NP_647933.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_195154.2 Gene:AT4G34280 / 829578 AraportID:AT4G34280 Length:783 Species:Arabidopsis thaliana


Alignment Length:575 Identity:111/575 - (19%)
Similarity:189/575 - (32%) Gaps:149/575 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 LLQSCDE--GSALHNSNLSLYGGCGEEEESPSVMTSISALEQLSIKNKQLSLSASYGSIFQQLVF 474
            ||:.|:|  .|.:...:|.:...|..|:.     .::..:..::.|.:.:.|..|:|..|.|.||
plant    63 LLELCNEINTSEVQGIDLFVRSACSLEDH-----YALPLIRSVNQKLRVVHLHDSFGKNFWQDVF 122

  Fly   475 --------LDLYDNQIERIANLDGLPSLSVLLLGKNRITDIGGLSSLKDTLRVLDLHGNKLTSLG 531
                    |::....|.::..:.....|..|:|.||||...|     :|.               
plant   123 FQGLSCKVLNVRSMHIHKLNIVGEFTQLHTLILDKNRIVGFG-----EDC--------------- 167

  Fly   532 SRINCLQQLKSLNLAGNQIRQI--NQQDFLGLRCLRELNLKRNKLRRINGFQHLVALERLWLCHN 594
              .:|:.:|..|::....:..:  :....|.|..|:||.           ||       :|:..:
plant   168 --FSCMPKLTYLSMCDTLVSDLWTSAAALLKLPSLKELR-----------FQ-------IWISCS 212

  Fly   595 DLHRVDDMASIARATR-LLEVTIENNPVSLAG--DCVSFLVSYLPLLQTLSQMPITEQVRRAALA 656
            |...::..:|.:.:|: .:...||::|...|.  |....:...||:.:||..|..:.::      
plant   213 DSSPLNSESSPSSSTKDDINTFIESDPPVEADMWDVAEQMDPSLPVEETLHSMDFSYKI------ 271

  Fly   657 WRQHKEQAQAAPGSSEAYHNIRREEVISNARTNWELLRSQQTVVGR---------PKSRLTSELA 712
                       |...:.     ...|..:|..|.|:|..::...|:         |....|.:..
plant   272 -----------PEQDDL-----DSHVSVSAGLNGEVLMREKVRRGKMPYQPKDVSPVDTFTRQFG 320

  Fly   713 KIN----ESNEGPAGEEG--EMESEESQQPKELMDELQALIKLPPIAKDLRNPHEEDGASSEASS 771
            .:.    .|...|...|.  .|....|....:::|.|       .|.|..|              
plant   321 NVGLKYISSKASPICSEKHYRMYMINSLPKLQVLDNL-------AIRKSDR-------------- 364

  Fly   772 LGPNVDSCSSCYSSDNEDGGAKNKPQT-PQIDENSNK---VGLTEKPPSSPVTVASQSPEVAIVT 832
                 |.....||::.||...|.|.:: .::.||..|   .|.::......:..|......:.:.
plant   365 -----DKAIETYSANFEDLPYKRKKESVVRVLENREKRSSKGKSQNSYKRSLCAAKMGSPASPLL 424

  Fly   833 PSAPVSSS---PSPPALTLTPPAAPGTPVPGTTSPSPSTTIISTLPVPATASSNASRPTSSKQRS 894
            .|.|..||   .......|.|......|:      .||..:..||.......::.|........|
plant   425 HSLPFLSSRIQQEDDNSRLCPRQFEYHPL------DPSLMVFGTLDGEVVVLNHESGKIFRYIPS 483

  Fly   895 RHAPITQLGL-------QINQRGGAAASSKRYMAGSLVRAQTVSSSTSNSSSSNS 942
            ..:..|.|||       .:...|.|..|.|.|      ..|..||:.:.||.|.|
plant   484 NGSQSTILGLCWLKIYPSMVIAGSANGSLKLY------DIQKASSTVTTSSHSTS 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13708NP_647933.1 leucine-rich repeat 449..471 CDD:275380 5/21 (24%)
PPP1R42 467..661 CDD:455733 39/206 (19%)
leucine-rich repeat 472..493 CDD:275380 4/28 (14%)
leucine-rich repeat 494..516 CDD:275380 8/21 (38%)
leucine-rich repeat 517..539 CDD:275380 1/21 (5%)
leucine-rich repeat 540..563 CDD:275380 4/24 (17%)
leucine-rich repeat 564..585 CDD:275380 5/20 (25%)
leucine-rich repeat 611..637 CDD:275380 6/27 (22%)
AT4G34280NP_195154.2 leucine-rich repeat 104..122 CDD:275380 5/17 (29%)
leucine-rich repeat 128..149 CDD:275380 2/20 (10%)
LRR_8 148..203 CDD:404697 15/76 (20%)
leucine-rich repeat 150..173 CDD:275380 10/44 (23%)
leucine-rich repeat 174..199 CDD:275380 4/24 (17%)
LRR_9 <324..374 CDD:405295 13/75 (17%)
WD40 <454..716 CDD:441893 22/85 (26%)
WD40 repeat 490..527 CDD:293791 11/42 (26%)
WD40 repeat 544..579 CDD:293791
WD40 repeat 586..623 CDD:293791
WD40 repeat 671..700 CDD:293791
WD40 repeat 723..768 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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