DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13708 and Lrriq1

DIOPT Version :10

Sequence 1:NP_647933.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster
Sequence 2:XP_011241894.1 Gene:Lrriq1 / 74978 MGIID:1922228 Length:1717 Species:Mus musculus


Alignment Length:1083 Identity:200/1083 - (18%)
Similarity:369/1083 - (34%) Gaps:362/1083 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 QQLQQQQN-YLPQTSL-----LKIEP-----FVPSFNQRLRRRPIGRSHSTLSHNVISKRPVPQQ 97
            |||.:::| ::.|.::     :|::|     .....|::....|..:.:..||.|..|::|..|:
Mouse   449 QQLNKRENTHVQQLAMKKSTGIKLKPNQAILVELKMNEKNESLPKLKINENLSKNQCSEQPSDQE 513

  Fly    98 HQQQQIQQPSELQ----------------------------------VGQQQQLKRGY---AAAA 125
            ...:.:.|.:||:                                  |||:.:...|:   .:|.
Mouse   514 FNAENVDQKNELENSNLKESVNEQYPWQGLESDTQTEEHVEHVREEKVGQETEKLFGFNQEVSAE 578

  Fly   126 QIRQQQ---QQQQRNLPRGVGIQ---RQRSKSTSSSAASNSCRPATAAVTPNTLVGSTGGTLVSG 184
            ..:|.|   ::.:..|...:.|:   :|...|..::::..|.:.:..::||:             
Mouse   579 DSKQAQGVMEETREGLAEEIEIKEMTQQGGPSDENNSSPISMQKSLPSLTPD------------- 630

  Fly   185 AIVTPQPNGICRIQRLPKEREELPDRINYDKRGLTAIPIFEQEPNLRLLSLQHNLINTFHIPKEV 249
               .|:|     ::|.....|:....:..::        .|:.|...:||....:||.       
Mouse   631 ---NPEP-----VERSVTLEEDQETDLKSER--------IEEIPEEGVLSCDAAVINA------- 672

  Fly   250 TPPPPPVPPPAVATPRESNNNKLGEYSNGNGNKEGGRSGLRGHHPGRLTRAMTNAGGNSHRLSP- 313
                                 ....::.|..:.:...||                     :|:| 
Mouse   673 ---------------------DASVHTEGEADLQDSASG---------------------KLAPS 695

  Fly   314 KSGGSPGSGSPLTTQAL------AINGGTAAGRSKLAKRG--YNYGQAQLTPPPALRMRYGLEKS 370
            :..||..:.:.|.|:.:      .|......|:...|:..  .....:|||...::..| .|...
Mouse   696 EEAGSHSANNLLATEEVEDSPKSEIQEALEKGQQTKAEADGVLTCSVSQLTVLSSVEER-RLAWV 759

  Fly   371 KSFVS-SSLQAMKHQQQLIQRRAMLKATRAGGVVAPGGAASNLLQSCDEGSALHNSNLSLYG--- 431
            |:|.. :.:......::::::|.::|            ...|.:...|..:.|.      ||   
Mouse   760 KTFKPWAEIFEQNQHKKIVKKRRLVK------------CPPNTMPPLDPSAILQ------YGPWK 806

  Fly   432 --------------GCGEEEESPSVMTSISALEQLSIKNKQLSLSASYG-SIFQQLVFLDLYDNQ 481
                          ||     |.|.:...|.|:.||:  ::..|::..| |...:|.::|..:|.
Mouse   807 SLKQVPVITFQGLPGC-----SLSTLAECSNLQILSL--RRCGLTSLQGLSHCTRLKYIDAQENH 864

  Fly   482 IERIA--------------NL-------DGLPSLSVLLLGKNRITDIGGLSSLK----------- 514
            ||.|:              ||       ||..:|..|.|..|:||.|.||.|||           
Mouse   865 IEAISCENLENLSVVLLNNNLLTSIHGFDGCTNLQSLELSHNKITRISGLESLKYLQELTVDHNQ 929

  Fly   515 ----------DTLRVLDLHGNKLTSLGSRINC-------LQ--------------QLKSLNLAGN 548
                      .|:..||...|.||.:....||       ||              .|:.|:|..|
Mouse   930 LISTKGLCEAPTIVYLDCSHNHLTGIDGIGNCGLLQIIKLQGNYLREPPSLRNHVLLRELHLDDN 994

  Fly   549 QIRQINQQDFLGLRCLRELNLKRNKLRRINGFQHLVALERLWL---CHNDLHRVDDMASIARATR 610
            .|..:.......|..|:.|::.:|.|..|....|||:||:|.:   |.:||..|  |........
Mouse   995 SISSVEGLSSCWLPLLQYLSISQNSLATIVPLFHLVSLEKLDVSNNCLSDLTNV--MCWFNACYS 1057

  Fly   611 LLEVTIENNPVSLAGDCVSFLVSYLPLLQTLSQMPIT-----------EQVRRAALAWRQHKEQA 664
            |.|:.:..|||....:....::..||.|:.|:...:.           .|..|..||..|::.|.
Mouse  1058 LRELCLTGNPVLQEINWRDSILKTLPALRVLNGDMLNSYANDRIEEHYHQDLRCLLALCQYQLQE 1122

  Fly   665 QAAPGSSEAYHNIRREEVISNARTNWELLRSQQTVVGRPKSRLTSELAKINESNEGPAGEEGEME 729
                      .|:..|:.|:..|   ::|...  .|.| .|:...:|.|::.... .|.|:|::.
Mouse  1123 ----------FNLLPEKYITQKR---DILTLH--AVDR-LSQYYKDLMKLSHECR-RAHEQGDVN 1170

  Fly   730 SEESQQPKELMDELQALIKLPPIAKDLRNPHEEDGASSEAS----SLGPNVDSCSSCYSSDNEDG 790
            :.|....:                   .|.:..|.::::::    :|....:||.:       |.
Mouse  1171 TTERSAAE-------------------TNKNHPDFSNTDSALQNKTLHAQTNSCEA-------DS 1209

  Fly   791 GAKN--------KPQTPQIDE----NSNKVGLTEKPPSSPVTVASQSPE--VAIVTPSAPVS--- 838
            .|.:        :|.|...:|    |..|: :..|...|.::..|.|..  :.:....:|:|   
Mouse  1210 PATSPNPLDTVFRPSTSHCEELRGRNQEKL-MAHKSEQSRISSRSNSRASFIEMKMADSPMSNHH 1273

  Fly   839 ----SSPSPPALTLTPP----------AAPGTPVPGTTSPSPSTTIISTLPVPATASSNASRPTS 889
                |||:..|:.:...          .......|.||.|.....|             .::.||
Mouse  1274 NAERSSPTKAAMVIQAQWRSYIAHRQINCSAEMHPTTTEPLQDPLI-------------NNQTTS 1325

  Fly   890 SKQRSRHAPITQLGLQINQRGGAAASSKRYMAGSLVRAQTVSS 932
            :::|.:    |.:.:| .||..||...:....|.::|.:..::
Mouse  1326 NEERRK----TNMDIQ-EQREKAALHIQAVWKGFILRKKLATA 1363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13708NP_647933.1 leucine-rich repeat 449..471 CDD:275380 6/22 (27%)
PPP1R42 467..661 CDD:455733 69/270 (26%)
leucine-rich repeat 472..493 CDD:275380 10/41 (24%)
leucine-rich repeat 494..516 CDD:275380 12/42 (29%)
leucine-rich repeat 517..539 CDD:275380 9/42 (21%)
leucine-rich repeat 540..563 CDD:275380 6/22 (27%)
leucine-rich repeat 564..585 CDD:275380 7/20 (35%)
leucine-rich repeat 611..637 CDD:275380 6/25 (24%)
Lrriq1XP_011241894.1 PTZ00121 <173..657 CDD:173412 37/236 (16%)
leucine-rich repeat 833..854 CDD:275380 6/22 (27%)
PPP1R42 836..1090 CDD:455733 68/257 (26%)
leucine-rich repeat 855..875 CDD:275380 6/19 (32%)
leucine-rich repeat 876..897 CDD:275380 4/20 (20%)
leucine-rich repeat 898..919 CDD:275380 11/20 (55%)
leucine-rich repeat 920..941 CDD:275380 0/20 (0%)
leucine-rich repeat 942..963 CDD:275380 7/20 (35%)
leucine-rich repeat 964..982 CDD:275380 2/17 (12%)
leucine-rich repeat 986..1009 CDD:275380 6/22 (27%)
leucine-rich repeat 1010..1031 CDD:275380 7/20 (35%)
leucine-rich repeat 1058..1084 CDD:275380 6/25 (24%)
IQCD 1337..1365 CDD:467745 7/28 (25%)

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