DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13708 and Lrguk

DIOPT Version :10

Sequence 1:NP_647933.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster
Sequence 2:XP_006506776.1 Gene:Lrguk / 74354 MGIID:1921604 Length:1341 Species:Mus musculus


Alignment Length:915 Identity:174/915 - (19%)
Similarity:298/915 - (32%) Gaps:362/915 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 LHNSNLSLYGGCGEEEESPSVMTSISALEQLSIKNKQLS--------------------LSASYG 466
            |...|||     |...|..|.::.:..|.:|:....:|:                    :|..|.
Mouse   151 LQKLNLS-----GNRIEDLSCVSCMPYLLELNASQNKLTTFFNFKPPQNLKKVDFSSNLISEMYD 210

  Fly   467 -SIFQQLVFLDLYDNQIERIANLDGLPSLSVLLLGKNRITDIGGLSSLKDTLRVLDLHGNKLTSL 530
             |.:..|..|.|.:|:||.|..|:...||:.|.|..|:||.|.||.:|  .::||.|..|.:.::
Mouse   211 LSAYHTLTQLILDNNEIEEITGLENCISLTHLSLAGNKITTIKGLGTL--PIKVLSLSNNMIETI 273

  Fly   531 ---------------GSRINCLQQLKS------LNLAGNQIRQINQQDFL-GLRCLRELNLKRN- 572
                           .::|:.||.|::      :||..|:|:::::.::: .|..||.|||.|| 
Mouse   274 TGLEELKALQNLDLSHNQISSLQGLENHDLLEVINLEDNKIKELSEIEYIENLPILRVLNLLRNP 338

  Fly   573 ------------------------------KLRRINGFQ---HLVAL--------------ERLW 590
                                          |:..:|.:.   .:||:              :|:|
Mouse   339 IQTKPEYWFFVIYMLLRLTELDQQKIKVEEKVFAVNKYDPPPEVVAVQDHMTHVVNSMSQPQRIW 403

  Fly   591 ------------------------------------------LCHN------------DLHRV-- 599
                                                      .||.            |.|.:  
Mouse   404 DSTLPSLDAPYPMLILTGPAACGKRELAHRLCRQFSTYFRYGACHTTRPPYFGEGDRVDYHFISQ 468

  Fly   600 ---DDMASIARATRLLEVTIENNPVSLAGD------------CV--------SFLVSYLP----L 637
               |:|.::.:.  :|.....|:...|..|            |:        |...||..    |
Mouse   469 EVFDEMLNMGKF--ILTFNYGNHNYGLNRDTIEGIARDGLASCIHMELEGVRSLKYSYFEPRYIL 531

  Fly   638 LQTLSQMPITEQVRRAALAWRQHKEQA-----------QAAPGSSEAYHNIRREEVISNARTNWE 691
            :..:.:......:||..|..|...|.|           |..||..:|..|....::.....:  |
Mouse   532 VVPMDKEKYEGYLRRKGLFSRAEIEIAVSRVDLYVKVNQKYPGYFDAVINADDMDIAYQKLS--E 594

  Fly   692 LLRS------------QQTVVGRPKSRLTS------------ELAKIN----------------- 715
            |:|.            ..|..|.|.|:.|:            .||::.                 
Mouse   595 LIREYLGLTETAAKTLAPTAAGAPSSKKTASGVPAHLVPSPRRLARLQADGQKTEAFLEVQTQAV 659

  Fly   716 -ESNEGPA-------GEEGEMESEESQQPKELMDELQALIKLPPIAKDL-RNPHEEDGASSEASS 771
             ..|:.|.       .||||...:|:..|:::.   .:.:.:|..|:|| ....||||   :.::
Mouse   660 VPENQDPTLPQSQELTEEGEPPEKETNVPQQVS---SSALGIPQQAQDLPPKVKEEDG---QPAN 718

  Fly   772 LGPNVDSCSSCYSSDNEDGGAKNKPQTPQIDENSNKVGLTEKPPSSPVTVASQSPEVAIVTPSAP 836
            |.|.:  .:.....::|.|     |..|:.|::|...  :::||..|....:.||:.|   |:..
Mouse   719 LPPKI--TTEMDGPEDEPG-----PPVPKADQSSTLA--SQEPPQQPAPAPTLSPQPA---PAPT 771

  Fly   837 VSSSPSPPALTLTPPAAPG---TPVP------GTTSPSPSTTII--------------------- 871
            :|..|: ||.||:|..||.   :|.|      |.|..:||...:                     
Mouse   772 LSPQPA-PAPTLSPQPAPAPTLSPQPDQDKESGETKVAPSNPALSEPAQGADLASLSPQRVQDEG 835

  Fly   872 --STLPVPATAS---------SNASRPTSSKQR-----SRHAPITQLG-------------LQIN 907
              |..|.|.:::         :...:||...||     :..|.:.:.|             .::.
Mouse   836 TESANPAPRSSTHTLPEDPSHTEVEKPTGGSQRPLKEETPKAEVMRAGTPYPEIPPPQDSTTKVR 900

  Fly   908 QRGGAAASSKRYMAGSLVRAQTVSS-------------------STSNSSSSNSAGRGKATNNG- 952
            ::.||.....|.....|.:.||::.                   .||:..:.|.:.|.....:| 
Mouse   901 EQPGALLPRSRLAPTRLPQPQTLAPLQSRRPTPKLLSPSREEALGTSSDQTPNPSPRSFPAQDGD 965

  Fly   953 ----LNLVATQTKAATSGNNQSSAGAAAGTGGSTT------AAPPAGAAA---TPN-----AAIT 999
                ..:..:|:|...:.:..::.....|..|..:      .:||....|   |||     .|.|
Mouse   966 PSKLPPISPSQSKPPRNSSPPTAHSPQQGQVGKASEVKLPLISPPVQEQAQQHTPNPPQEEEAPT 1030

  Fly  1000 VSKPS 1004
            |..|:
Mouse  1031 VQLPT 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13708NP_647933.1 leucine-rich repeat 449..471 CDD:275380 6/42 (14%)
PPP1R42 467..661 CDD:455733 65/346 (19%)
leucine-rich repeat 472..493 CDD:275380 8/20 (40%)
leucine-rich repeat 494..516 CDD:275380 10/21 (48%)
leucine-rich repeat 517..539 CDD:275380 6/36 (17%)
leucine-rich repeat 540..563 CDD:275380 6/29 (21%)
leucine-rich repeat 564..585 CDD:275380 9/54 (17%)
leucine-rich repeat 611..637 CDD:275380 8/49 (16%)
LrgukXP_006506776.1 LRR 97..>340 CDD:443914 52/195 (27%)
leucine-rich repeat 131..150 CDD:275380
leucine-rich repeat 151..172 CDD:275380 7/25 (28%)
leucine-rich repeat 173..194 CDD:275380 3/20 (15%)
leucine-rich repeat 195..216 CDD:275380 3/20 (15%)
leucine-rich repeat 217..238 CDD:275380 8/20 (40%)
leucine-rich repeat 258..281 CDD:275380 5/24 (21%)
leucine-rich repeat 282..300 CDD:275380 4/17 (24%)
leucine-rich repeat 304..328 CDD:275380 5/23 (22%)
GMPK 416..537 CDD:238026 15/122 (12%)
PHA03247 <678..1233 CDD:223021 76/377 (20%)
Blue background indicates that the domain is not in the aligned region.

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