Protein Alignment CG13708 and Ppp1r42

DIOPT Version :10

• Sequence 1: NP_647933.1
• Gene: CG13708 / 38582
• FlyBaseID: FBgn0035577
• Length: 1301
• Species: Drosophila melanogaster
• Sequence 2: NP_001121041.1
• Gene: Ppp1r42 / 683514
• RGDID: 1585679
• Length: 355
• Species: Rattus norvegicus
• Alignment Length: 357
• Identity: 84/357 - (23%)
• Similarity: 150/357 - (42%)
• Gaps: 49/357 - (13%)

  Fly   424 NSNLSLYGGCGEEEESPSVMTSISALEQLSIKNKQLSLSASYGSIFQQLVFLDLYDNQIERIANL 488
            ||||       :..:..:::..:..:..::..::.:. |....|:.:.|..|.||||:|.::.||
  Rat    12 NSNL-------KPRKEETLVQCLKKITHINFSDRNID-SIDDLSLCKNLSVLYLYDNRISQVTNL 68

  Fly   489 DGLPSLSVLLLGKNRITDIGGLSSLKDTLRVLDLHGNKLTSLGSRINCLQQLKSLNLAGNQIRQI 553
            :...:|:.|.|..|.|:.|..||||| .|..|.|.||.: ::...:..|::|:.|::...:: .:
  Rat    69 NYTTNLTHLYLQNNCISCIENLSSLK-KLEKLYLGGNYI-AVVEGLEGLEELRELHVESQRL-PL 130

  Fly   554 NQQDFLGLRCLRE-------LNLKRNKLRRINGFQHLVALERLWLCHNDLHRVDDMASIAR-ATR 610
            .::.....|.||.       ||:..|.:..|...:.|..|..|....|.|..|.|:..:.| ..:
  Rat   131 GEKLLFDPRTLRSLAKSLSTLNISNNNIDDIKDLEMLENLNHLIAVDNQLMHVKDLEVLLRKLMK 195

  Fly   611 LLEVTIENNPVSLAGDCVSFLVSYLPLLQTLSQMPITEQVRRAALAWRQHKEQAQAAP---GSSE 672
            |.::.:..|||.|.......|:.....|:.|....|....|:..:.|:..||..:.:.   ..||
  Rat   196 LWKMDLNGNPVCLKPKYRDRLILMSKSLEFLDGKEIKNLERQFLMNWKASKEAKKISKKRRNRSE 260

  Fly   673 AYHNIRREEVISNARTNWELLRSQQTVVGRPKSRLTSELAKINESNEGPAGEEGEMESEESQQPK 737
            ..:|    ..|||..|...::......||:||....|::.:.          .|:..|:.||:.|
  Rat   261 DQNN----SYISNFETIHHIVPVYYPQVGKPKVVFFSDVQRY----------LGKASSKFSQEDK 311

  Fly   738 EL---------MDELQALIKLPPIAKDLRNPH 760
            ..         :.|.::|:    ...|:..||
  Rat   312 TTITEDIGNLSLKESESLL----TKTDIHEPH 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG13708	NP_647933.1	leucine-rich repeat	449..471	CDD:275380	2/21 (10%)
		PPP1R42	467..661	CDD:455733	55/201 (27%)
		leucine-rich repeat	472..493	CDD:275380	9/20 (45%)
		leucine-rich repeat	494..516	CDD:275380	11/21 (52%)
		leucine-rich repeat	517..539	CDD:275380	6/21 (29%)
		leucine-rich repeat	540..563	CDD:275380	2/22 (9%)
		leucine-rich repeat	564..585	CDD:275380	7/27 (26%)
		leucine-rich repeat	611..637	CDD:275380	6/25 (24%)
Ppp1r42	NP_001121041.1	PPP1R42	27..246	CDD:411060	56/222 (25%)
		leucine-rich repeat	30..51	CDD:275380	2/21 (10%)
		leucine-rich repeat	74..95	CDD:275380	11/21 (52%)
		leucine-rich repeat	96..147	CDD:275380	11/52 (21%)
		leucine-rich repeat	148..169	CDD:275380	5/20 (25%)
		leucine-rich repeat	170..195	CDD:275380	7/24 (29%)