DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13708 and lrguk

DIOPT Version :10

Sequence 1:NP_647933.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster
Sequence 2:XP_068076856.1 Gene:lrguk / 559670 ZFINID:ZDB-GENE-050419-232 Length:739 Species:Danio rerio


Alignment Length:724 Identity:154/724 - (21%)
Similarity:246/724 - (33%) Gaps:233/724 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   421 ALHNSNLSLYG-----GCGEEEESPSVMTSISALEQLSIKNKQLSLSASYGSI-----FQQLVFL 475
            |.||.....:|     ...|...|.:.||::..|...|...|.:....|:..|     .::|..|
Zfish    88 ASHNQLTDFFGFQPPKNLKEVNFSHNQMTAMKDLSAYSSLTKLILDHNSFSVIRGLEKCKRLSHL 152

  Fly   476 DLYDNQIERIANLDGLPSLSVLLLGKNRITDIGGLSSLKDTLRVLDLHGNKLTSLGSRINCLQQL 540
            .|..|.|.||..||.|| |..|.|..|.|..|..|.:|.: |:||||..|::.||....| |:.|
Zfish   153 SLAHNNISRIRGLDHLP-LRELCLAGNMINKIENLQTLHN-LQVLDLSCNRIQSLTGLQN-LRFL 214

  Fly   541 KSLNLAGNQIRQINQQDFL-GLRCLRELNLKRNKLRRINGF--------QHLVALERLWLCHND- 595
            .::||..|.|.:|.:...| .|..|||:||.:|.::..:.:        |||:.|::..:...: 
Zfish   215 GTVNLESNLITEIKEAAHLHDLILLREINLLKNPVQDHDDYRIAVIFLLQHLILLDKQTVTAEEK 279

  Fly   596 ---LHRVDDMASIARA----TRLL------EVTIENNPVSLAGD--------------------- 626
               :::.|....:..|    |.|:      :|..::...||...                     
Zfish   280 VAAVNKYDPPLEVVAARDHMTHLVYQLMQPQVIFDSTLPSLDAPYPMLVLTGPQACGKRELAHKL 344

  Fly   627 CVSF-----------------------------------LVSYLPLLQT---------LSQMPIT 647
            |..|                                   ::.....:||         ||:..| 
Zfish   345 CQEFSDYFAYGACHTTRGPYFGEEDGLDYHFVTEEEFHNMIQMGQFIQTMQYGGHWYGLSRESI- 408

  Fly   648 EQVRRAALAWRQHKEQAQAAPGSSEAYHNIRREEVISNARTNWELL---------RSQQTVVGRP 703
            |:|.|..||...|.| .:.......:|...|...:|.:...|:.|.         ...:|.|.| 
Zfish   409 ERVAREGLACCVHME-LEGVFSLKNSYFEPRYVLLIPSVVDNYVLFLKARGFYSNAQMETAVSR- 471

  Fly   704 KSRLTSELAKINESNEG------PAGEEGEMESEESQQPKELMDELQALIKLPPIAKDLRNPHEE 762
                ....|:||....|      |..:    .:|..:..|:|:.|...|              ||
Zfish   472 ----IDLYARINRERPGFFDSIIPCDD----RAEAYRSLKQLVKEYLGL--------------EE 514

  Fly   763 DGASSEASSLGPN---------VDSCSSCYSSDNEDGGAKN---------KPQTPQIDENSNKV- 808
            .....::||:.|:         :.:.|:..|:|..|..::|         .||..::..|..:: 
Zfish   515 HSGGGDSSSITPDNTSTNTTGELPAASATESTDLMDSYSRNYQKKIQANMTPQRTEMASNHRRLQ 579

  Fly   809 ----GLTEKPPSSPVTVASQSPEVAIVTPSAP--VSSSPSPPALTLTPPAAPGTPVPGTTSPSPS 867
                .|:.|.|.:...:..:|      .|:||  ::|...|||   .|.::|..|. |.::|:.|
Zfish   580 QIREALSGKSPGAYAELFQRS------VPAAPSSLASQSHPPA---GPSSSPVRPA-GLSAPNLS 634

  Fly   868 TTIISTLPVPATASSNASRPTSSKQRSRHAPITQLGLQINQRGGAAASSKRYMAGSLVRAQTVSS 932
                      ..:||..||.:|             ||.:....|.                    
Zfish   635 ----------EDSSSEESRASS-------------GLSMRSSAGV-------------------- 656

  Fly   933 STSNSSSSNSAGRGKATNNGLNLVATQTKAATSGNNQSSAGAAAGTGGSTTAAP-PAGAAATPNA 996
                 .|:.|..||....:|.|:  .....:..|.::.|      ..|.|..|| ||....:|..
Zfish   657 -----FSAESPARGSDAGSGPNI--EPLDISMLGQDRDS------LRGLTPDAPRPASDRVSPTH 708

  Fly   997 AITVSKPSA 1005
            ..:..:|.|
Zfish   709 PSSPGRPGA 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13708NP_647933.1 leucine-rich repeat 449..471 CDD:275380 5/26 (19%)
PPP1R42 467..661 CDD:455733 67/286 (23%)
leucine-rich repeat 472..493 CDD:275380 10/20 (50%)
leucine-rich repeat 494..516 CDD:275380 8/21 (38%)
leucine-rich repeat 517..539 CDD:275380 10/21 (48%)
leucine-rich repeat 540..563 CDD:275380 8/23 (35%)
leucine-rich repeat 564..585 CDD:275380 9/28 (32%)
leucine-rich repeat 611..637 CDD:275380 6/87 (7%)
lrgukXP_068076856.1 PPP1R42 <61..118 CDD:455733 8/29 (28%)
leucine-rich repeat 61..82 CDD:275380
leucine-rich repeat 83..104 CDD:275380 4/15 (27%)
leucine-rich repeat 105..126 CDD:275380 5/20 (25%)
PPP1R42 108..279 CDD:455733 55/173 (32%)
leucine-rich repeat 127..148 CDD:275380 3/20 (15%)
leucine-rich repeat 149..168 CDD:275380 9/18 (50%)
leucine-rich repeat 170..191 CDD:275380 8/20 (40%)
leucine-rich repeat 192..210 CDD:275380 8/17 (47%)
leucine-rich repeat 211..238 CDD:275380 9/26 (35%)
GMPK 326..449 CDD:238026 17/124 (14%)
PHA03307 520..>739 CDD:223039 53/264 (20%)
Blue background indicates that the domain is not in the aligned region.

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