DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13708 and lrrc23

DIOPT Version :10

Sequence 1:NP_647933.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster
Sequence 2:XP_073794429.1 Gene:lrrc23 / 450033 ZFINID:ZDB-GENE-041010-153 Length:327 Species:Danio rerio


Alignment Length:311 Identity:78/311 - (25%)
Similarity:124/311 - (39%) Gaps:70/311 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   413 LQSCDEGSALHNSNLSLYGGCGEEEESPSVMTSIS-ALEQLSIKNKQLSLSASYGSIFQQLVFLD 476
            |:||.....:...:|||....|         ..:| |..:|.:|||.|:..|...| |..|.:||
Zfish    34 LESCPLTQDILARSLSLLCRTG---------NGLSHAYVRLDLKNKGLTDLALLSS-FIHLRYLD 88

  Fly   477 LYDNQIERIANLDGLPSL------SVLLLG------------------KNRITDIGGLSSLKDTL 517
            |..|.:...:.|.||..|      |.||.|                  .||:.|:.||..  ..|
Zfish    89 LSSNHLSDFSPLAGLTQLLWVKGDSNLLQGFEGQPFGQLTFLQWLSIASNRLFDVKGLGG--PAL 151

  Fly   518 RVLDLHGNKL-TSLGSRINCLQQLKSLNLAGNQIRQINQQDFLGLRCLRELNLKRNKLRRINGFQ 581
            ..|:|.||.: |..|.....|..|.:|.|.||   .:...|.:.|..||.|.|.:|.::::.|.:
Zfish   152 ETLNLTGNGIQTMQGLDYPNLTNLVTLELRGN---CLETTDGIYLPNLRHLYLAQNNIKKLEGLE 213

  Fly   582 HLVALERLWLCHNDLHRVDDMASIARATRLLEV------------------------TIENNPVS 622
            .|..|..|.|.||.|..:|.:::..:....|.|                        .:.:||::
Zfish   214 KLERLITLHLRHNQLETLDGLSASMKCLEYLNVRGNLISSMRALQTLASVGQTLKALVLLDNPIA 278

  Fly   623 LAGDCVSFLVSYLPLLQTLSQMPITEQVRRAALAWRQHKEQAQAAPGSSEA 673
            ...|...:::|.||.|:.:.:.|:|.:.:     :...|:..::..|..:|
Zfish   279 KTDDYRLYVISQLPHLERVDKDPVTPEEK-----FEAQKKNKESQTGLEQA 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13708NP_647933.1 leucine-rich repeat 449..471 CDD:275380 8/21 (38%)
PPP1R42 467..661 CDD:455733 60/242 (25%)
leucine-rich repeat 472..493 CDD:275380 8/20 (40%)
leucine-rich repeat 494..516 CDD:275380 10/45 (22%)
leucine-rich repeat 517..539 CDD:275380 8/22 (36%)
leucine-rich repeat 540..563 CDD:275380 7/22 (32%)
leucine-rich repeat 564..585 CDD:275380 7/20 (35%)
leucine-rich repeat 611..637 CDD:275380 7/49 (14%)
lrrc23XP_073794429.1 None

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