DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13708 and LRRC9

DIOPT Version :10

Sequence 1:NP_647933.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_001342201.1 Gene:LRRC9 / 341883 HGNCID:19848 Length:1494 Species:Homo sapiens


Alignment Length:1069 Identity:209/1069 - (19%)
Similarity:332/1069 - (31%) Gaps:387/1069 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   475 LDLYDNQIERIANLDGLPSLSVLLLGKNRITDIGGLSSLKDTLRVLDLHGNKLTSLGSRINCLQQ 539
            |.||.|:|.:|.||:.|..|.||.|..|.|.:|.||.:||: |:.|:|.||.:.|:|..::..:|
Human   103 LYLYFNKISKIENLEKLIKLKVLWLNHNTIKNIEGLQTLKN-LKDLNLAGNLINSIGRCLDSNEQ 166

  Fly   540 LKSLNLAGNQIRQINQ-QDFLGLRCLRELNLKRNKLRRINGFQHLVALERLWLCHNDLHRVDDMA 603
            |:.|||:||||....: .:...|.||::                        ||.||        
Human   167 LERLNLSGNQICSFKELTNLTRLPCLKD------------------------LCLND-------- 199

  Fly   604 SIARATRLLEVTIENNPVSLAGDCVSFLVSYLPLLQTLSQMPITEQVRRAALAWRQHKEQAQAAP 668
                      .....|||.|..:..:.::.:||.||....:.::.         :|.||.|....
Human   200 ----------PQYTTNPVCLLCNYSTHVLYHLPCLQRFDTLDVSA---------KQIKELADTTA 245

  Fly   669 GSSEAYHNIRREEVISNARTNWELLRSQQTVVGR-PKSR----------LTSELAKINESNEGPA 722
            .....|:|:|.:.:..:.:.:.|.|..|:..:.: |:.|          |..|||::..|.:|.:
Human   246 MKKIMYYNMRIKTLQRHLKEDLEKLNDQKCKLQKLPEERVKLFSFVKKTLERELAELKGSGKGHS 310

  Fly   723 GEEGEMES----------------EESQQPKEL----------------MDELQAL--------- 746
              :|...|                |.|.|.|.|                :||::|:         
Human   311 --DGSNNSKVTDPETLKSCETVTEEPSLQQKILAKLNALNERVTFWNKKLDEIEAIYHIEVKQKK 373

  Fly   747 ----IKLPPIAKDLR---NPHEEDGASSEASSLGPNVDSCSSCYS-------------------- 784
                :.:|.:..:|.   |.|.|:|..|:        |..:.||.                    
Human   374 KSHGLLIPLLLIELETVGNFHFEEGTRSD--------DWFNFCYELILSRFCAWDFRTYGITGVK 430

  Fly   785 -----------------------SDNED--------------------GGAKNKPQTPQIDENSN 806
                                   .:|||                    ..:..|....||.|...
Human   431 VKRIIKVNNRILRLKFEEKFQKFLENEDMHDSESYRRMLECLFYVFDPEVSVKKKHLLQILEKGF 495

  Fly   807 KVGLTEKPPSSPVTVASQSPEVAIVTPSAPVSSSPSPPALTLTPPAAPGTPVPGTTSPSPSTTII 871
            |...|.|.|        ...|..||:.|..:|..|....|                         
Human   496 KDSETSKLP--------LKKEAIIVSNSLSISECPRIEFL------------------------- 527

  Fly   872 STLPVPATASSNASRPTSSKQRSRHAPITQLGLQINQ-RGGAAASSKRYMAGSLVRAQTVSSSTS 935
                                 :.:|....::.|:... |.|....:|.::..|:...:..|.|.|
Human   528 ---------------------QQKHKDEKKISLKHELFRHGILLITKVFLGQSVQAHEKESISQS 571

  Fly   936 NSSSSNSA--GRGKATNN-----GLNLVATQTKAATSGNNQSSAGAAAGTGGSTTAAPPAGAAAT 993
            |....||.  .|....|:     ..:....|.|.....::.............|....|:..:..
Human   572 NYPMVNSVFIPRKYLLNSVMGQRNCDCSVRQCKWFVFDHDLVLPEYVVEFEYITMVKAPSLFSVF 636

  Fly   994 PNAAITVSK--PSAAERERE-QGGDYLIEICGRY----------------------------LNI 1027
            .|..:..||  |..:...:: :..|.:|::..|.                            ||:
Human   637 NNVILEESKKNPEVSVFSKDLKFDDEVIKMEPRIKARPKLISLDDKTILSLAKTSVYSHIVSLNL 701

  Fly  1028 YGQGALRFIDKQWNPAKANDVHTLNFSYINFNSIVCVLGRIKLRFPHAEHYVFRETNISCLGQLN 1092
            :|..    :.|..:.:|...:..||.|:..|..:..|.....|.:..|.|     .::..|....
Human   702 HGNS----LSKLRDLSKLTGLRKLNISFNEFTCLDDVYHLYNLEYLDASH-----NHVITLEGFR 757

  Fly  1093 GLAELQ--GLSSLMIDAEGNGITL--KET------------WRAYAIYRLSHWG----LKQLNGQ 1137
            ||.:|:  .||...:...||.|.:  |.|            |:..|..|||..|    |..|||.
Human   758 GLMKLKHLDLSWNQLKKSGNEINMLCKHTTSLLTLDIQHNPWQKPATLRLSVIGRLKTLTHLNGV 822

  Fly  1138 EVTEAEVEAANAMYVG-----LS-------------DLVLWSMPEVMLQPLLARLRLDETCTASK 1184
            .::|.|..||.....|     ||             .|.:|...:::.|             .||
Human   823 FISEEEATAAMKFIAGTRITQLSLLRHSSTKEERPRILSIWPSAKILTQ-------------VSK 874

  Fly  1185 LSP----------KEWLLRPDNKSLRLVVGKEALQ---W----KKNAGGGAGTSTSMNINQGTEA 1232
            |.|          |...|..|.:.|..:...|.|:   |    ..|.....|..:.:|:.:.|..
Human   875 LGPHLHLSGNCYLKITALNLDGQHLFEITNLEKLENLKWASFSNNNLTKMEGLESCINLEELTLD 939

  Fly  1233 GS------------------------TAMAPSVRDRGRQHFALLLENTCNAVEKLHKLETLWPSM 1273
            |:                        |.......|......:|.|||  |.:..|..|:..:..:
Human   940 GNCISKIEGISKMTKLTRLSINNNLLTGWEEHTFDNMLHLHSLSLEN--NRITSLSGLQKSFTLV 1002

  Fly  1274 LLDIVRNTLLDYAQLDVYLRNL--MCELL 1300
            .|.|..|    |..::..:.||  :|.|:
Human  1003 ELYISNN----YIAVNQEMHNLKGLCNLV 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13708NP_647933.1 leucine-rich repeat 449..471 CDD:275380
PPP1R42 467..661 CDD:455733 52/186 (28%)
leucine-rich repeat 472..493 CDD:275380 9/17 (53%)
leucine-rich repeat 494..516 CDD:275380 11/21 (52%)
leucine-rich repeat 517..539 CDD:275380 7/21 (33%)
leucine-rich repeat 540..563 CDD:275380 9/23 (39%)
leucine-rich repeat 564..585 CDD:275380 1/20 (5%)
leucine-rich repeat 611..637 CDD:275380 5/25 (20%)
LRRC9NP_001342201.1 leucine-rich repeat 37..51 CDD:275380
PPP1R42 55..236 CDD:455733 51/184 (28%)
leucine-rich repeat 56..77 CDD:275380
leucine-rich repeat 78..99 CDD:275380
leucine-rich repeat 100..121 CDD:275380 9/17 (53%)
leucine-rich repeat 122..143 CDD:275380 10/20 (50%)
leucine-rich repeat 144..166 CDD:275380 7/21 (33%)
leucine-rich repeat 192..223 CDD:275381 10/72 (14%)
LRR 631..1016 CDD:443914 80/412 (19%)
leucine-rich repeat 698..717 CDD:275380 5/22 (23%)
leucine-rich repeat 718..739 CDD:275380 5/20 (25%)
leucine-rich repeat 740..761 CDD:275380 6/25 (24%)
leucine-rich repeat 762..788 CDD:275380 8/25 (32%)
leucine-rich repeat 789..846 CDD:275380 16/56 (29%)
leucine-rich repeat 847..910 CDD:275380 13/75 (17%)
PPP1R42 878..1066 CDD:455733 29/156 (19%)
leucine-rich repeat 911..932 CDD:275380 3/20 (15%)
leucine-rich repeat 933..954 CDD:275380 2/20 (10%)
leucine-rich repeat 955..978 CDD:275380 2/22 (9%)
leucine-rich repeat 1026..1094 CDD:275380 1/2 (50%)
PPP1R42 1116..1361 CDD:455733
leucine-rich repeat 1141..1166 CDD:275380
leucine-rich repeat 1167..1203 CDD:275380
leucine-rich repeat 1204..1227 CDD:275380
leucine-rich repeat 1228..1249 CDD:275380
leucine-rich repeat 1250..1273 CDD:275380
leucine-rich repeat 1274..1295 CDD:275380
leucine-rich repeat 1296..1320 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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