DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13708 and Cep97

DIOPT Version :9

Sequence 1:NP_001261433.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster


Alignment Length:858 Identity:174/858 - (20%)
Similarity:296/858 - (34%) Gaps:297/858 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   470 QQLVFLDLYDNQIERIANLDGLPSLSVLLLGKNRITDIGG-------------------LSSLKD 515
            :||:   |.:|::::|.|:|....:..|.|.:|::..:.|                   :..||:
  Fly    33 RQLI---LDENELQKIDNIDSYLKIETLSLARNQLLRMYGVCRLHCLRELNLSFNGILSIEGLKE 94

  Fly   516 T--LRVLDLHGNKLTSLGSRINCLQQLKSLNLAGNQIRQINQQDFLGLRCLRELNLKRNKLRRIN 578
            .  ||||:|.||.:.:: ..:|....|:.||||.|.|..|:...:  ||.|:||.|..|:|..:.
  Fly    95 CIHLRVLNLEGNNIKTI-EHLNTNVNLECLNLADNSIGSISDMSY--LRNLKELYLHGNRLTHLR 156

  Fly   579 GFQHLV--ALERLWLCHNDLHRVDDMASIARATRLLEVTIENNPVSLAGDCVSFLVS-----YLP 636
            .....:  :||.|.|..|.::.::::.:::..:.||.::|.:||      ||:.:.|     |.|
  Fly   157 QCDKCLPTSLETLTLAKNSINDLNEICTLSHLSNLLSISIADNP
------CVTMINSLDGFDYRP 215

  Fly   637 LLQTLSQMPITEQVRRAALAWRQHKEQAQAAPGSSEAYHNIRREEVISNARTNWELLRSQQTVVG 701
            .:                |.|..           |..|.:....:.|.:.:..|  |.||    |
  Fly   216 FV----------------LNWCM-----------SLKYIDGFVVDPIESLKAEW--LYSQ----G 247

  Fly   702 RPKSRLTSE---LAKINESNEGPAGEEGEMESE-------------ESQQPKELMDELQALIKLP 750
            |.:.....|   |||...|.....|:..|.|::             :.|..:|:||...:.....
  Fly   248 RGRQFRVGEQQGLAKYLSSVCPLVGKALENENDRKLRLILSKAQHHQRQLQEEIMDNANSSASTS 312

  Fly   751 PIAKDLRNPHEEDGAS-------SEASSLGPNVDSCSSCY---SSDN---EDGGAKNKPQTPQID 802
            |      :.|.:...|       |..|....:.:|..:.|   ||:|   .|.|:.|......|.
  Fly   313 P------SSHRKKPTSRIQSPRFSRLSGRQGSPESMVNSYHGNSSNNSIVSDNGSTNHSLQMSIS 371

  Fly   803 --ENSNKVG----LTEKPPSSPVTVASQSPEVAIVTPSAPVSSSPSPPALTLTPPAAPGTPVPGT 861
              ||....|    |.....||.||..:.:.     |.|.|.:.:|:        |....|.:..|
  Fly   372 LIENIKNDGEGFSLAGSGMSSSVTTKTYNS-----TESTPRNITPN--------PYNDQTFISQT 423

  Fly   862 TSPSPSTTIISTLPVPATASSNASRPTSSKQRSRHAPITQLGLQ-----INQRGGAAASSKRYMA 921
            .|..|.......:|||.|..|....|.:..||   ..:|.|..|     ||:......:..|..:
  Fly   424 PSGGPLAAASKMVPVPETLMSPDVCPAAVAQR---VTVTALNPQLHKTKINKNKDNKLNLPRVRS 485

  Fly   922 GSLVRAQTVSSSTSNSSSSNSAGRGKATNNGLNLVATQTKAATSGNNQSSAGAAAGTGGSTTAAP 986
            ..|.|.|:.:||....::..||.         |:.|.:       ..|.|| ..|.:||.:|   
  Fly   486 PQLKRNQSPTSSPRRMANKCSAD---------NMQAPE-------KLQQSA-VLADSGGFST--- 530

  Fly   987 PAGAAATPNAAITVSKPSAAEREREQGGDYLIEICGRYLNIYGQGALRFIDKQWNPAKANDVHTL 1051
                                            :..|..:||....|:|.:..|    |...:|. 
  Fly   531 --------------------------------DDDGEQINIEKLRAIRKMAAQ----KQQQMHQ- 558

  Fly  1052 NFSYINFNSIVCVLGRIKLRFPHAEHYVFRETNISCLGQLNGLAELQGLSSLMID--AEGNGITL 1114
                          .::|.:.         :.|::|..:|             |:  .|.:.:|:
  Fly   559 --------------EQLKQQV---------DNNLNCQDRL-------------IEHVTESSAVTI 587

  Fly  1115 KETWRAYAI-------------YRLSHWGLKQL------------NGQEVTEAEVEAANAMYVGL 1154
            ::.||.|..             .|.:...::||            |.:::.:.:::|.||     
  Fly   588 QKMWRGYHTRKKTNKDIAERLQRRRTQEYIEQLGKDMLLTKAQLENERKIQQLQMQAINA----- 647

  Fly  1155 SDLVLWSMPEVMLQPLLARLRLDETCTASKLSPKEWLLRPDNKSLRLVVGKEALQWKKNAGGGAG 1219
                ||.....|                 ::.||.             :...|.|.:.:.|||:|
  Fly   648 ----LWKKVSTM-----------------EVDPKG-------------IPAAAEQGEDSNGGGSG 678

  Fly  1220 TSTSMNINQGTEA 1232
               .::::|.:.|
  Fly   679 ---HLSLDQNSAA 688

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG13708NP_001261433.1 LRR_RI <428..572 CDD:238064 35/122 (29%)