DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13708 and tilB

DIOPT Version :10

Sequence 1:NP_647933.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_608460.1 Gene:tilB / 33130 FlyBaseID:FBgn0014395 Length:395 Species:Drosophila melanogaster


Alignment Length:280 Identity:61/280 - (21%)
Similarity:108/280 - (38%) Gaps:52/280 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   513 LKDTLRVLDLHGNKLTSLGSRINCLQQLKSLNLAGNQIRQINQQDFLGLRCLRELNLKRNKLRRI 577
            |..||..:.||...:..:....|..:.||.|.|..|.|.::  ::...|:.|..||:..|.:.|:
  Fly    19 LISTLEEISLHQEDIEVIEHIQNWCRDLKILLLQSNLIARL--ENLHKLKRLEYLNVAINNIERV 81

  Fly   578 NGFQHLVALERLWLCHNDLHRVDDMASIARATRLLEVTIENNPVSLAGDCV------SFLVSYLP 636
            ...:...:|.:|.|..|.:..:..:.|:.....|.|:.:..||      ||      .::|:.||
  Fly    82 ENLEGCESLSKLDLTLNFIRELTSVESLCGNYNLRELVLIGNP------CVDYPHYRDYVVATLP 140

  Fly   637 LLQTLSQMPITEQVRRAALAWRQHKEQAQAAPGSSEAYHNIRREEVISNARTNWELLRSQQTV-V 700
            .|.:|..:.||...|..||     :|.:             :...:|...:...::.|.:|.: |
  Fly   141 QLNSLDCVEITPSERLRAL-----RELS-------------KNRSIIVQKQVEQDIERDEQRIRV 187

  Fly   701 GRPKSRLTSELAKINESNEGPAGEEGEMES---EESQQPKELMDELQALIKLPPIAKDLRNPHEE 762
            .:.:|.|....|.|.:       ||..:::   .:|:...|:..|         ||:..|...|.
  Fly   188 AKQQSALAEHCAGIED-------EEERIKAFWQAKSEHCPEIRTE---------IARQHRLGRER 236

  Fly   763 DGASSEASSLGPNVDSCSSC 782
            ....|....|.|..:..:.|
  Fly   237 HETKSPLDPLKPQRNLFAPC 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13708NP_647933.1 leucine-rich repeat 449..471 CDD:275380
PPP1R42 467..661 CDD:455733 39/153 (25%)
leucine-rich repeat 472..493 CDD:275380
leucine-rich repeat 494..516 CDD:275380 1/2 (50%)
leucine-rich repeat 517..539 CDD:275380 4/21 (19%)
leucine-rich repeat 540..563 CDD:275380 7/22 (32%)
leucine-rich repeat 564..585 CDD:275380 5/20 (25%)
leucine-rich repeat 611..637 CDD:275380 8/31 (26%)
tilBNP_608460.1 PPP1R42 <23..155 CDD:455733 34/139 (24%)
leucine-rich repeat 23..45 CDD:275378 4/21 (19%)
leucine-rich repeat 46..67 CDD:275378 7/22 (32%)
leucine-rich repeat 68..89 CDD:275378 5/20 (25%)
leucine-rich repeat 90..114 CDD:275378 5/23 (22%)
Blue background indicates that the domain is not in the aligned region.

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