DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13708 and ccep-97

DIOPT Version :10

Sequence 1:NP_647933.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_504289.1 Gene:ccep-97 / 178871 WormBaseID:WBGene00019842 Length:630 Species:Caenorhabditis elegans


Alignment Length:507 Identity:107/507 - (21%)
Similarity:192/507 - (37%) Gaps:82/507 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 PGGAASNLLQSCDE----------GSALHNSNLSLYGGCGEEEESPSVMTSISALEQLSIKNKQL 459
            |..||::.....|:          .|:|.||.....|....|:....|..::. |..||:.|.:.
 Worm     7 PKKAAADAADGEDDDKENLDDSRANSSLANSTFVTSGRIQNEKADVEVDGTLD-LANLSLTNLEK 70

  Fly   460 SLSASY---------GSIFQQLVFLDLY---------DNQIER-IANLDGLPSLSVLLLGKNRIT 505
            |.:|.|         |:.||:..::.|:         |.||.: ||:.:  .:|..|.|.:|::.
 Worm    71 SFAAEYSEVKHLKISGNCFQKFTYIKLFPKCQIIDARDCQINKFIADFN--YNLLELHLARNQLK 133

  Fly   506 DIGGLSSLKDTLRVLDLHGNKLTSLGSRINCLQQLKSLNLAGNQIRQINQQDFLGLRCLRELNLK 570
            :...|... :.|::|||..|.:....|  ..|:.|:.|||:||.:.:|  .|......|:.::|.
 Worm   134 ETNQLGRF-ENLKILDLSNNLIEPPVS--FSLKNLEILNLSGNFLNEI--PDLSKCVALQTISLA 193

  Fly   571 RNKLRRINGFQHLVA---LERLWLCHNDLHRVDDMASIARATRLLEVTIENNPVSLAGDCVSFLV 632
            .||:..:.....|:.   |:.|.:..|.:..:...:.::...:|.|..:..|| |:.....|.|.
 Worm   194 DNKISDLTTITKLICPTNLKNLDISSNSIEDLSQFSVLSTFKKLEEFVVAGNP-SITSVLDSDLF 257

  Fly   633 SYLPL--------LQTLSQMPITEQVRRAALAWRQHKEQAQAAPGSSEAYHNIRREEVISNARTN 689
            .|...        |.|:....|.:||:.............:..||:    |:...:::.|:...:
 Worm   258 DYRSYIFACCSEQLHTIDGQKIEDQVQTEGEWLALQGSIKKIGPGN----HDALCQQIASHFPDS 318

  Fly   690 WELLRSQQTVVGRPKSRLTSELAKINESNEGPAGEEGEMESEESQQP-KELMDELQALIKLPPIA 753
            .....:|::.....:.|.:   .|:.|.:.....|:.:........| :|...::.||:.     
 Worm   319 GPPTPAQKSCHKALEKRRS---MKVPEKHLEEFSEDTDRTENSVYSPFREWNGKIGALMT----- 375

  Fly   754 KDLRNPHEEDGASSEASSLGPNVDSCSSCYSSDNEDGGAKNKPQTPQIDENSNKVGLTEKPPSSP 818
                   .|...||....:..|:..||...:..|:....:|:....:..||...:|.| :..|:.
 Worm   376 -------PEASGSSRRIPVNKNLRMCSPPEARKNKTFKFQNETSPNRYPENFRPLGST-RSISTE 432

  Fly   819 VTVASQSPEVAIV-------TP-----SAPVSSSPSPPALTLTPPAAPGTPV 858
            ..:.|...||:..       ||     .||:......|....||..|..|.|
 Worm   433 TVICSSRTEVSFTVDGRSESTPLPRIDCAPLERKEQEPEQRHTPSVADVTYV 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13708NP_647933.1 leucine-rich repeat 449..471 CDD:275380 9/30 (30%)
PPP1R42 467..661 CDD:455733 49/214 (23%)
leucine-rich repeat 472..493 CDD:275380 6/30 (20%)
leucine-rich repeat 494..516 CDD:275380 5/21 (24%)
leucine-rich repeat 517..539 CDD:275380 7/21 (33%)
leucine-rich repeat 540..563 CDD:275380 8/22 (36%)
leucine-rich repeat 564..585 CDD:275380 5/20 (25%)
leucine-rich repeat 611..637 CDD:275380 8/25 (32%)
ccep-97NP_504289.1 LRR <57..293 CDD:443914 57/244 (23%)
leucine-rich repeat 57..78 CDD:275380 7/21 (33%)
leucine-rich repeat 122..143 CDD:275380 5/21 (24%)
leucine-rich repeat 144..164 CDD:275380 7/21 (33%)
leucine-rich repeat 165..186 CDD:275380 8/22 (36%)
leucine-rich repeat 187..211 CDD:275380 5/23 (22%)
leucine-rich repeat 212..236 CDD:275380 3/23 (13%)
leucine-rich repeat 237..256 CDD:275380 6/19 (32%)

Return to query results.
Submit another query.