DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13708 and sds22

DIOPT Version :10

Sequence 1:NP_647933.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster
Sequence 2:XP_318952.4 Gene:sds22 / 1279257 VectorBaseID:AGAMI1_008035 Length:329 Species:Anopheles gambiae


Alignment Length:210 Identity:72/210 - (34%)
Similarity:104/210 - (49%) Gaps:28/210 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   445 SISALEQLSIKNKQLSLSASYGSI------FQQLVFLDLYDNQIERIANLDGLPSLSVLLLGKNR 503
            ::|||..|    ::|.|.|:..|:      |..|..|:|.||:|.:|.|||.|.||:.|.||||:
Mosquito   129 NLSALTNL----RKLFLCANRISLIENLDHFSSLTMLELGDNKIRKIENLDNLSSLTHLYLGKNK 189

  Fly   504 ITDIGGLSSLKDTLRVLDLHGNKLTSLGSRINCLQQLKSLNLAGNQIRQINQQDFLGLRCLRELN 568
            ||.|..|..|. .|..|.|..|:||.: ..::.|..|..|.|:.|.|..|...|  ..:.|..|:
Mosquito   190 ITKIENLDKLV-KLECLSLQCNRLTKI-ENLDQLVNLTELYLSENGIEMIENLD--QNKQLETLD 250

  Fly   569 LKRNKLRRINGFQHLVALERLWLCHNDLHRVDDMASIARATRLLEVTIENNPVSLAGDCVSFLVS 633
            |.:|:::||...:||..||..|:..|.:.....:..:|...:|..|.:|.|||  |.|     |:
Mosquito   251 LAKNRIKRIENIEHLEMLEEFWMNDNGVSEWTCVDKLASNKKLATVYLERNPV--ASD-----VN 308

  Fly   634 Y-------LPLLQTL 641
            |       :|.||.:
Mosquito   309 YRRKLKLAVPWLQKI 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13708NP_647933.1 leucine-rich repeat 449..471 CDD:275380 7/27 (26%)
PPP1R42 467..661 CDD:455733 65/188 (35%)
leucine-rich repeat 472..493 CDD:275380 11/20 (55%)
leucine-rich repeat 494..516 CDD:275380 11/21 (52%)
leucine-rich repeat 517..539 CDD:275380 7/21 (33%)
leucine-rich repeat 540..563 CDD:275380 7/22 (32%)
leucine-rich repeat 564..585 CDD:275380 8/20 (40%)
leucine-rich repeat 611..637 CDD:275380 10/32 (31%)
sds22XP_318952.4 None

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