DRSC/TRiP Functional Genomics Resources

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Protein Alignment LeuRS-m and CDC60

DIOPT Version :9

Sequence 1:NP_647932.1 Gene:LeuRS-m / 38581 FlyBaseID:FBgn0027085 Length:869 Species:Drosophila melanogaster
Sequence 2:NP_015165.1 Gene:CDC60 / 855943 SGDID:S000006081 Length:1090 Species:Saccharomyces cerevisiae


Alignment Length:957 Identity:178/957 - (18%)
Similarity:301/957 - (31%) Gaps:310/957 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DSQDKY-----YVLSM-FPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAEN 117
            ||::.:     ::.|| :||.:|.:|.||....:..:....|:||.||....|:|:...|:|...
Yeast    48 DSEELHRTYPKFMSSMAYPYMNGVMHAGHCFTLSKVEFSIGFERMNGKRALFPLGFHCTGMPILA 112

  Fly   118 AAN--QRGVEPASWTEQNIAQMKEQLKRLGCSFDWNHE--------LSTCSPKYYKWTQHLFLML 172
            .|:  :|..|.......|:...:|::|. ....:.:||        .|..:.|..:......:||
Yeast   113 CADKLKREAELFGKNFDNVPAEEEEIKE-ETPAEKDHEDVTKFKAKKSKAAAKKGRGKYQFEIML 176

  Fly   173 HRHGLAYQNEALVNWDPVDKTVLADEQVDANGCSWRSGAKVEKKLLRQWFIRTSAYAKQLLDGLE 237
            .   |....|.::.:......:.....:..:.|: ..||:::   .|:.|:.|.|      :...
Yeast   177 Q---LGIPREEIIKFADAKYWLTYFPPLCESDCT-SLGARID---WRRSFVTTDA------NPYY 228

  Fly   238 DPTLRDWRDIINLQRHWIGECDGYAFNLLTSASGLLRV---WTTHPEHLKDPHAFLVLRSNHHLS 299
            |..:| |:                 .|.| .|:|.::.   :|.:.|  ||..|.:    :|...
Yeast   229 DAFIR-WQ-----------------MNKL-KAAGKIKFGERYTIYSE--KDGQACM----DHDRQ 268

  Fly   300 KLKGADSLSAANPFAGTTMPVV-FSDEVT--FPPKSDV------YLAAPSFRGEDK--------- 346
            ..:|.    ....:.|..:..: |:|:..  ....||:      |..|.:.|.|..         
Yeast   269 SGEGV----TPQEYIGVKIEALEFADDAAKIIDSSSDLDKSKKFYFVAATLRPETMYGQTCCFVS 329

  Fly   347 --------DLWDSYGL----AF-------------------TSNGK--------DEESLSPANWE 372
                    |..|||.:    ||                   |..||        ..:|:.| ...
Yeast   330 PTIEYGIFDAGDSYFITTERAFKNMSYQKLTPKRGFYKPIVTVPGKAFIGTKIHAPQSVYP-ELR 393

  Fly   373 MLRKEVLQAATRLNVGGYRVSSKLKDW-----LISRQRYWGTP--------IPIVHCQKCG---A 421
            :|..|.:.|.....|.....|:...|:     |:.:..|:|..        :||:|.:|.|   |
Yeast   394 ILPMETVIATKGTGVVTCVPSNSPDDYITTKDLLHKPEYYGIKPEWIDHEIVPIMHTEKYGDLTA 458

  Fly   422 VPVPEEQLPVSLPPKD------SPKEAFLCDC--------PKCGEKDAR---------------- 456
            ..:.||:...|  |||      :.|.|:..|.        |..|||..:                
Yeast   459 KAIVEEKKIQS--PKDKNLLAEAKKIAYKEDYYTGTMIYGPYKGEKVEQAKNKVKADMIAAGEAF 521

  Fly   457 -----------RETDTMDTFVDSSWYY--------LRYLDAQNSERIFDTALTKKFMPV------ 496
                       |..|.....::..||.        .:.::.....::|...:...|..|      
Yeast   522 VYNEPESQVMSRSGDDCIVSLEDQWYVDYGEESWKKQAIECLEGMQLFAPEVKNAFEGVLDWLKN 586

  Fly   497 -------------------------DLYIGGKEHAVLHLYYARFINHFLHSCGLSP---TSEPFS 533
                                     |..|....:.:.||.:..:..:.:...|:|.   |.|.|.
Yeast   587 WAVCRTYGLGTRLPWDEKYLVESLSDSTIYQSFYTIAHLLFKDYYGNEIGPLGISADQMTDEVFD 651

  Fly   534 RL-------------LVQGMVMGRSFR------VKGSGR-YVPE-------TEVEIVNAKKNQAV 571
            .:             |.....:.|.|.      |..||: .:|.       |.|.:...|.....
Yeast   652 YIFQHQDDVKNTNIPLPALQKLRREFEYFYPLDVSISGKDLIPNHLTFFIYTHVALFPKKFWPKG 716

  Fly   572 LKETKEPVVMTWEKMSKSKLNGVEPSDMFNEYGTDTTRLIILADVAPT--------SHRNWSSAT 628
            ::.... :::...|||||..|.:.......::|.|..| |..||...|        |:.|.:...
Yeast   717 IRANGH-LMLNNSKMSKSTGNFMTLEQTVEKFGADAAR-IAFADAGDTVEDANFDESNANAAILR 779

  Fly   629 FPGILNWQKRLWLTLQDFQQAREDQTASDVVPTSEEFLAEDAKLFD----------ARNFYVKGA 683
            ...:..|                   |.::...|.....|....||          ....|.:.|
Yeast   780 LFNLKEW-------------------AEEITKESNLRTGEITDFFDIAFEHEMNALIEKTYEQYA 825

  Fly   684 TFNYRHAQQLSVAISKMQGLTNSLRRTPKHVLRHGKQFERALAAQIIMLAPMAPHFASELWSKFV 748
            ..||::|  |...:...|...:..|....  :.|.....|.:..|.::|||:|||||..::.:.:
Yeast   826 LTNYKNA--LKYGLFDFQAARDYYREASG--VMHKDLIARYIETQALLLAPIAPHFAEYIYREVL 886

  Fly   749 A---------IPGRLNPASQELQWSEDVLAQRWPDIDPAYNLDLSIK 786
            .         .|....|.      .:.|||.    :|...||..||:
Yeast   887 GNQTSVQNAKFPRASKPV------DKGVLAA----LDYLRNLQRSIR 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeuRS-mNP_647932.1 leuS 40..848 CDD:234743 178/957 (19%)
LeuRS_core 63..624 CDD:173906 140/770 (18%)
Anticodon_Ia_like 624..747 CDD:299868 25/132 (19%)
Anticodon_Ia_like <723..799 CDD:299868 20/73 (27%)
CDC60NP_015165.1 leuS_arch 17..1088 CDD:273056 178/957 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0495
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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