DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LeuRS-m and AT1G09620

DIOPT Version :10

Sequence 1:NP_647932.1 Gene:LeuRS-m / 38581 FlyBaseID:FBgn0027085 Length:869 Species:Drosophila melanogaster
Sequence 2:NP_172433.2 Gene:AT1G09620 / 837489 AraportID:AT1G09620 Length:1091 Species:Arabidopsis thaliana


Alignment Length:1001 Identity:178/1001 - (17%)
Similarity:287/1001 - (28%) Gaps:377/1001 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PKDSQDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMG-------------- 107
            ||.. :|::....|||.:|.||:||....:..|..:.:.|:.|.||..|.|              
plant    40 PKPG-EKFFSTFPFPYMNGYLHIGHAFSLSKVDFASAYHRLRGANVLLPFGFHCTGMPIKASADK 103

  Fly   108 ----------------------------------------------------------WD---SF 111
                                                                      |:   ||
plant   104 LRREIEQFGNPPVFTAEDTTKVPEVQEESSDTIALPIPGQFKGKKSKVAAKAGGQVYQWEIMRSF 168

  Fly   112 GLPAENAANQRGVEPASWTEQNIAQMKEQLKRLGCSFDWNHELST--CSPKYYKWTQHLFLMLHR 174
            ||.....||.|  ||:.|.........|.|:..|...||.....|  .:|.:..:.:.....|..
plant   169 GLTDSEIANFR--EPSEWLYYFPPLAVEDLRAYGLGCDWRRSFVTTDVNPFFDAFVRWQMRKLKS 231

  Fly   175 HGLAYQNEALVNWDPVDKTVLAD-EQVDANGCSWRSGAKVEKKLLRQWFIRTSAYAKQLLDG--- 235
            .|...::.....:.|:|....|| ::....|...:....::.::::.:.::...     |:|   
plant   232 MGKIVKDRRYTIFSPLDGQPCADHDRATGEGVQPQEYTLIKMEVVKPFPLKLGP-----LEGKRV 291

  Fly   236 -LEDPTLRDWRDIINLQRHWI---GECDGYAFN-----LLTSASGLLRVWTTHPEHLKDPHAFLV 291
             |...|||. ..:......|:   |:...|..:     :||..:.|...:....::.::| :.||
plant   292 FLAAATLRP-ETMYGQTNAWVLPDGKYGAYEISETEVFILTERAALNLAYQNFSKNPQEP-SCLV 354

  Fly   292 LRSNHHLSKLKGADSLSA-------------ANPFAG--TTMP-------VVFSDEVTFPPKSDV 334
            ..:.:.|..|.....||.             .|...|  |::|       :...|.:..|...|.
plant   355 ELTGYDLIGLPLRSPLSVNEIIYALPMLTILTNKGTGIVTSVPSDAPDDYMALQDLIKKPALQDK 419

  Fly   335 Y--------------LAAPSF--RGEDKDLWD------------------SYGLAFTSN------ 359
            |              :..|.|  :..:|...|                  :|...||..      
plant   420 YGVKTEWLPTEIIPIINIPEFGDKAAEKVCLDLKIKSQNDKEKLAEAKRLTYLKGFTEGTMLIGE 484

  Fly   360 --GKDEESLSP--------------------------------------------ANWEMLRKEV 378
              |:..:.:.|                                            :.|..:.:|.
plant   485 FFGRKVQEIKPIIKTKLIETGEAIIYSEPEKPVMSRSGDECVVALTDQWYITYGESEWRKIAEEC 549

  Fly   379 LQAATRLNV-------GGYRVSSKLKDWLISRQRYWGTPIP---------------------IVH 415
            |   :::|:       |.....|.|..|..||....||.||                     :.|
plant   550 L---SKMNLYSDETRHGFEHTLSWLNQWACSRSFGLGTRIPWDEQFLVESLSDSSLYMAYYTVAH 611

  Fly   416 CQKCGAVPVPEEQLPVSLPPKDSPKEAFLCD--CPKCGE------KDARRETDTMDTFVDSSWYY 472
            ....|.:....:.|.......|...|...||  .||..:      .:.::|.|        .|| 
plant   612 IFHDGDMYKGSKSLIRPQQMNDEVWEYLFCDGPYPKSSDIPSAVLSEMKQEFD--------YWY- 667

  Fly   473 LRYLDAQNSERIFDTALTKKFMPVDLYIGGKEHAVLHLYYARFINHFLHSCGLSPTSEPFSRLLV 537
                                  |:||.:.||:....||.:  ||  :.|:..::..:.|      
plant   668 ----------------------PLDLRVSGKDLIQNHLTF--FI--YNHTALMANRNWP------ 700

  Fly   538 QGMVMGRSFRVKGSGRYVPETEVEIVNAKKNQAVLKETKEPVVMTWEKMSKSKLNGVEPSDMFNE 602
                  |..|..|.                           :::..||||||..|.........|
plant   701 ------RGIRCNGH---------------------------IMLNSEKMSKSTGNFRTLRQSIEE 732

  Fly   603 YGTDTTRLIILADVAP-TSHRNWSSATF-PGILNWQKRL-W----LTLQDFQQAREDQTASDVVP 660
            :....|| ..|||... ....|::..|. ..||...|.| |    |.::...:.....|.:|.|.
plant   733 FSATGTR-FCLADAGDGVDDANFAFETANAAILRLTKELTWMEEVLDVESSLRTGPPSTYADKVF 796

  Fly   661 TSEEFLA--------EDAKLFDA--RNFY-VKGATFNYRHAQQLSVAISKMQGLTNSLRRTPKHV 714
            .::..:|        :|....:|  ..|| ::.|...||    ||.....|              
plant   797 ENDMNIALRLTERAYKDCLFREALKNGFYDLQAARDEYR----LSCGTGGM-------------- 843

  Fly   715 LRHGKQFERALAAQIIMLAPMAPHFASELWSKFVAIPGRLNPASQELQWSEDVLAQRWPDIDPAY 779
              |.....:.:..|..::.|:.||||..:|.|.:...|             .||...||   |:.
plant   844 --HHDLLLKFMDVQTRLIVPICPHFADYVWRKVLNKEG-------------CVLTAGWP---PSN 890

  Fly   780 NLDLSIK-VNGFENCVIKVQRTHLDK 804
            ..||.:| .|.:....|.:.|..|.|
plant   891 EPDLVLKSANKYLQDSIVLMRKLLQK 916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeuRS-mNP_647932.1 LeuS 40..848 CDD:440261 178/1001 (18%)
AT1G09620NP_172433.2 PLN02959 1..1082 CDD:215518 178/1001 (18%)

Return to query results.
Submit another query.