DRSC/TRiP Functional Genomics Resources

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Protein Alignment LeuRS-m and lars1b

DIOPT Version :9

Sequence 1:NP_647932.1 Gene:LeuRS-m / 38581 FlyBaseID:FBgn0027085 Length:869 Species:Drosophila melanogaster
Sequence 2:XP_698279.6 Gene:lars1b / 569778 ZFINID:ZDB-GENE-030114-7 Length:1176 Species:Danio rerio


Alignment Length:1149 Identity:199/1149 - (17%)
Similarity:337/1149 - (29%) Gaps:470/1149 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VKHRIEAHWR-----EQLSGGQFNPKDSQDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRM 97
            ::..::..|.     |..:........:::||::...:||.:|.||:||....:..:....:||:
Zfish    16 IEEEVQQKWEQDKLFENEAPATIGENTNKNKYFITFPYPYMNGRLHLGHTFCLSKCEFAVGYQRL 80

  Fly    98 CGKNVFQPMGWDSFGLPAENAAN--QRGVE----PASWTEQN----------------------- 133
            .||....|.|....|:|.:..|:  :|.:|    |..:.|::                       
Zfish    81 KGKQCLFPFGLHCTGMPIKACADKLKREMELYGYPPQFPEEDEEEEEQKKTSDDVIIKDKTKGKK 145

  Fly   134 ---IAQ----------MK---------------------------EQLKRLGCSFDWNHELST-- 156
               :|:          ||                           |.|||:|...||.....|  
Zfish   146 SKAVAKSGSSKFQWDIMKSLGLQDAEIVKFAEAEHWLDYFPPLAVEDLKRMGLKVDWRRSFITTD 210

  Fly   157 CSPKYYKWTQHLFLMLHR-----------------------------HGLAYQNEALVNWDPVD- 191
            .:|.|..:.:..|:.|..                             .|:..|...|:....|: 
Zfish   211 VNPFYDSFVRWQFINLKERKKIKFGKRYTIYSPKDGQPCMDHDRQTGEGVGPQEYTLIKMKVVEP 275

  Fly   192 ----------KTV------LADEQV------------------DANGCSWRSGAKVEKKLLRQWF 222
                      |||      |..|.:                  .|||..:.|..:..:.:..|.|
Zfish   276 YPTKLGALKGKTVFLVAATLRPETMFGQTNCWIRPDMKYVVFETANGDLFISTQRSARNMSYQGF 340

  Fly   223 IRTSAYAKQLLD---------GLEDPTLRDWRDIINLQRHWIGECDGYAFNLLT----SASGLLR 274
            .:.:.....:::         .|..| |..::.|             ||..:||    ..:|:: 
Zfish   341 TKENGVVPVIMNIMGQDILGCALSAP-LTSYKTI-------------YALPMLTIKEDKGTGVV- 390

  Fly   275 VWTTHPEHLKDPHAFL-------VLRSNHHLS-------------KLKGADSLSAANPFAGTTMP 319
              |:.|....|..|.|       .||..:.:.             ::.|..:|||         |
Zfish   391 --TSVPSDAPDDIAALRDIKKKQALREKYGIQDFMVLPFEPVPIIEIPGYGNLSA---------P 444

  Fly   320 VVFSDEVTFPPKSD----------VYL--------AAPSFRGE---------------------- 344
            :| .||:....::|          |||        ....|:|:                      
Zfish   445 LV-CDELKIQSQNDREKLAEAKEKVYLKGFYEGIMLVEGFKGQKVQDVKKPIQKMMVEKGEALIY 508

  Fly   345 ------------DK------DLWD-SYGLAFTSNGKDEESLSPANWEMLRKEVLQAATRLNVGG- 389
                        |:      |.|. .||        :||....|:..:...|.....||.|... 
Zfish   509 MEPEKQVLSRSADECVVALCDQWYLDYG--------NEEWKKQAHGVLEHLETFCDETRKNFEAT 565

  Fly   390 ------------YRVSSKL---KDWLI---SRQRYWGTPIPIVHCQKCGAVPVPEEQLPVSLPPK 436
                        |.:.::|   :.|||   |....:.....:.|..: |.|...:...|:.:.|:
Zfish   566 LAWLQEHACSRTYGLGTRLPWNEQWLIESLSDSTIYMAYYTVAHLLQ-GGVLSGQGPSPLGIRPQ 629

  Fly   437 DSPKEAF-----------LCDCPKCGEKDARRETDTMDTFVDSSWYYLRYLDAQNSERIFDTALT 490
            ...:|.:           ..|.||......|||.:        .||                   
Zfish   630 QMTREVWDYIFFKTSPFPKTDIPKEHLLKLRREFE--------FWY------------------- 667

  Fly   491 KKFMPVDLYIGGKEHAVLHLYYARFINHFLHSCGLSPTSEPFSRLLVQGMVMGRSFRVKGSGRYV 555
                |||:.:.||:....||.|..: ||    ..:.|..                     ||:: 
Zfish   668 ----PVDVRVSGKDLVPNHLSYYLY-NH----VAMWPND---------------------SGKW- 701

  Fly   556 PETEVEIVNAKKNQAVLKETKEPVVMTWEKMSKSKLNGVEPSDMFNEYGTDTTRLIILADVAPT- 619
                        .|||  .....:::..||||||..|.:..|....::..|..|| .|||...| 
Zfish   702 ------------PQAV--RANGHLLLNSEKMSKSTGNFLTLSQAIAKFSADGMRL-ALADAGDTV 751

  Fly   620 SHRNWSSA-TFPGIL------NWQKRLWLTLQDFQQAREDQTASD----------VVPTSEEFLA 667
            ...|:..| ...|||      .|.|.: :..||..:.....|.:|          ::.|.:.:  
Zfish   752 EDANFVEAMADAGILRLFTWVEWVKEM-IANQDNLRTGPADTFNDRVFISEMNSGIIKTDQHY-- 813

  Fly   668 EDAKLFDARNFY---VKGATFNYRHAQQ--LSVAISKMQGLTNSLRRTPKHVLRHGKQFERALAA 727
                   .|..|   :|...|.::.|:.  ..:||..|                |.....:.:..
Zfish   814 -------ERMMYKEALKSGFFEFQAAKDKYRELAIEGM----------------HKDLVFQFIEN 855

  Fly   728 QIIMLAPMAPHFASELWSKFVAIPGRLNPASQELQWSEDVLAQRWPDIDPAYNL----------- 781
            |.::|||:.||.....||    :.|:          |..|:..:||...|...:           
Zfish   856 QTLLLAPICPHLCEHTWS----LLGK----------SSTVMKAQWPTAGPVDEILIRSSQYLMDT 906

  Fly   782 --DLSIKVNGF-----------------ENCVIKVQRTHLDKVTHSDALDIAFNTESVTSYLIDK 827
              ||.:::..:                 .:|.|.|.:|: ....||....:..:.:|....|.|.
Zfish   907 AHDLRLRLKAYTQPAKGKKGDNKPPAKPTHCTIYVAKTY-PPWQHSALSLLGKHYKSNNGALPDN 970

  Fly   828 KIRTTNFVLYPGIEAILN-----IYVDKAKMKQKPPTTDDAEAQ 866
            |:........|.::..:.     :.:.|..:::..|...|.|.:
Zfish   971 KVIAMELGAMPELKKYMKRVMPFVAMIKDNLEKNGPRVLDLELE 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeuRS-mNP_647932.1 leuS 40..848 CDD:234743 195/1127 (17%)
LeuRS_core 63..624 CDD:173906 145/818 (18%)
Anticodon_Ia_like 624..747 CDD:299868 28/144 (19%)
Anticodon_Ia_like <723..799 CDD:299868 19/105 (18%)
lars1bXP_698279.6 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0495
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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