DRSC/TRiP Functional Genomics Resources

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Protein Alignment LeuRS-m and Lars2

DIOPT Version :9

Sequence 1:NP_647932.1 Gene:LeuRS-m / 38581 FlyBaseID:FBgn0027085 Length:869 Species:Drosophila melanogaster
Sequence 2:NP_001335096.1 Gene:Lars2 / 102436 MGIID:2142973 Length:902 Species:Mus musculus


Alignment Length:822 Identity:350/822 - (42%)
Similarity:477/822 - (58%) Gaps:78/822 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 WRRLLTQSCTRND-------NPELTSDVKHRIEAHWREQL--SGGQFNPKDS-QDKYYVLSMFPY 72
            |.||: ..|:|:.       ..|.|...:..:|..|.:|:  ...:.:.:|. :.|:|:||||||
Mouse    28 WERLI-PGCSRSIYSATGKWTKEYTLQTRKDVEKWWHQQIKEQASRVSEEDKLKPKFYLLSMFPY 91

  Fly    73 PSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAENAANQRGVEPASWTEQNIAQM 137
            |||.||||||||||::|::||||:|.|..|..|||||:|||||||||.:|.:.|.|||:.||..|
Mouse    92 PSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAIERNLHPESWTQSNIKHM 156

  Fly   138 KEQLKRLGCSFDWNHELSTCSPKYYKWTQHLFLMLHRHGLAYQNEALVNWDPVDKTVLADEQVDA 202
            ::||.|||..|.|:.|::||.|.||||||:||:.|:..|||||.||||||||||:||||:|||:.
Mouse   157 RKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLANEQVNE 221

  Fly   203 NGCSWRSGAKVEKKLLRQWFIRTSAYAKQLLDGLEDPTLRDWRDIINLQRHWIGECDGYAFNLLT 267
            .|||||||||||||.||||||:|:||||.:.|.|.|  |.:|..|..:|.||||:|.|...:...
Mouse   222 YGCSWRSGAKVEKKYLRQWFIKTTAYAKAMQDALAD--LPEWYGIKGMQAHWIGDCVGCHLDFTL 284

  Fly   268 SASG-----LLRVWTTHPE------H--LKDPHAFLVLRSNHHLSKLK---------GADSLSAA 310
            ...|     .|..:|..||      |  :...|..|     |..|.:|         |.|.|:..
Mouse   285 KVDGEDTGEKLTAYTATPEAIYGISHVAISPSHGLL-----HGCSSVKKALQKALVPGRDCLTPV 344

  Fly   311 NPFAGTTM---PVVFSDEVTFPPKSDVYLAAPSFRGEDKDLWDSYGLAFTS------NGKDEESL 366
            ...:..|:   |:|...........|..:..||...||..|..:.||.::.      :|.:..|.
Mouse   345 MAVSMLTLQEVPIVIMANPDLEGSLDSKIGIPSTSSEDTRLAQALGLPYSEVIEASPDGTERLSG 409

  Fly   367 SPANWEMLRKEVLQAATR----LNVGGYRVSSKLKDWLISRQRYWGTPIPIVHCQKCGAVPVPEE 427
            |.....|.|::...|.||    :.|||:..|:||||||||||||||||||||||..||.||||.:
Mouse   410 SAEFTGMTRQDAFVALTRKARGMRVGGHVTSNKLKDWLISRQRYWGTPIPIVHCPACGPVPVPLQ 474

  Fly   428 QLPVSLP-----------PKDSPKEAFLCDCPKCGEKDARRETDTMDTFVDSSWYYLRYLDAQNS 481
            .|||.||           |..:..|...|.||:| :..|:||||||||||||:|||.||.|..|:
Mouse   475 DLPVILPSIASLTGRGGSPLATALEWVNCSCPRC-KGSAKRETDTMDTFVDSAWYYFRYTDPHNT 538

  Fly   482 ERIFDTALTKKFMPVDLYIGGKEHAVLHLYYARFINHFLHSCGLSPTSEPFSRLLVQGMVMGRSF 546
            :..|.:||...:||||||||||||||:||:||||::||.|...:....|||.:||.||::.|::|
Mouse   539 QSPFGSALADFWMPVDLYIGGKEHAVMHLFYARFLSHFCHDQKMVKHREPFHKLLAQGLIKGQTF 603

  Fly   547 RVKGSGRYVPETEVEIVNAKKNQAVLKETKEPVVMTWEKMSKSKLNGVEPSDMFNEYGTDTTRLI 611
            |:. ||:.:.:.:::....   ..|..:|||.:.:|||||||||.|||:|.::..:||.||.||.
Mouse   604 RLP-SGQCLKKEDIDFTGP---APVCAKTKEKLEVTWEKMSKSKHNGVDPEEIVAQYGIDTIRLY 664

  Fly   612 ILADVAPTSHRNWSSAT--FPGILNWQKRLWLTLQDFQQAREDQTA--SDVVPTSEEFLAEDAKL 672
            ||....|.....|...|  .||:|.||:|||.....|.:||...|.  ..::.:.|:..|::  |
Mouse   665 ILFAAPPEKDILWDVKTDALPGVLRWQQRLWSLTTRFIEARTSGTVPQPQLLNSKEKTKAQN--L 727

  Fly   673 FDARNFYVKGATFNYRHAQQLSVAISKMQGLTNSLRRTPKHVLRHGKQFERALAAQIIMLAPMAP 737
            ::.:|..:...|.::.....|:..:|::.||:::|.:..:.|:.|..:||.||.|.::|.||:||
Mouse   728 WEYKNAVIAQVTTHFTEDFALNSVVSQLMGLSSALSQASQRVVLHSPEFEDALCALLVMAAPLAP 792

  Fly   738 HFASELWSKFVAIPGRLNPASQELQWSEDVLAQRWPDIDPAY 779
            |..||||:....:|.:|   .....|...|:.|.||.:|..:
Mouse   793 HVTSELWAGLTLVPSKL---CDHYAWDSGVMLQAWPTVDSQF 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeuRS-mNP_647932.1 leuS 40..848 CDD:234743 343/793 (43%)
LeuRS_core 63..624 CDD:173906 290/606 (48%)
Anticodon_Ia_like 624..747 CDD:299868 41/126 (33%)
Anticodon_Ia_like <723..799 CDD:299868 21/57 (37%)
Lars2NP_001335096.1 tRNA-synt_1g 56..900 CDD:330949 343/793 (43%)
'HIGH' region 91..101 8/9 (89%)
'KMSKS' region 638..642 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849815
Domainoid 1 1.000 209 1.000 Domainoid score I2839
eggNOG 1 0.900 - - E1_COG0495
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6526
Inparanoid 1 1.050 629 1.000 Inparanoid score I854
Isobase 1 0.950 - 0 Normalized mean entropy S1418
OMA 1 1.010 - - QHG55246
OrthoDB 1 1.010 - - D142174at33208
OrthoFinder 1 1.000 - - FOG0003811
OrthoInspector 1 1.000 - - oto92506
orthoMCL 1 0.900 - - OOG6_101393
Panther 1 1.100 - - LDO PTHR43740
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1448
SonicParanoid 1 1.000 - - X2655
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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