DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhc64C and Dnhd1

DIOPT Version :9

Sequence 1:NP_001261432.1 Gene:Dhc64C / 38580 FlyBaseID:FBgn0261797 Length:4661 Species:Drosophila melanogaster
Sequence 2:XP_008758037.1 Gene:Dnhd1 / 690115 RGDID:1584052 Length:4758 Species:Rattus norvegicus


Alignment Length:5252 Identity:1077/5252 - (20%)
Similarity:1904/5252 - (36%) Gaps:1426/5252 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 PEI-TLTAHQTVNNVIRKCAEENRKAKVADFGDKVEDSSFLNLLQNGVNRWIAEIKKVTKLNRDP 266
            ||: ..:..|.:|..:|...|| ||..::      .:..:.:.||:|:                .
  Rat    36 PELWARSVRQQLNTCLRFILEE-RKVPLS------PEIPWFDTLQSGL----------------A 77

  Fly   267 GSGTALQEISFWLNLERALYRIQEKRESPEVALTLD-------ILKHGKRFHATVSFDTDTGLKQ 324
            |...:.||.|         :..|||:|..:..:..:       :|...|...:.|..|.......
  Rat    78 GCSCSGQEHS---------WDCQEKQEHLKAVVESEQRNMLELLLSELKSLFSAVLQDGSCEAWH 133

  Fly   325 ALATVADYNPLMKDFPINDLLSATELEKIRPAVQQIFAHLRKVRNTKYPIQRCLKLIEAISRDL- 388
            .|..|....|     |..::| |.:|| :.|.::|::....||:..   :|  |.|::||.:.. 
  Rat   134 YLHAVLGLLP-----PYREML-AGQLE-LLPFLEQLYCWAPKVQAW---LQ--LDLLDAIDKAFP 186

  Fly   389 -SQQLLKVLGTRRLMHIPFDEFERVMNQCFEIFSCWDDEYDKLQGLLRDIVKKKRDEHLKMVWRV 452
             ...||     ....|:....:.:..::.....:|             ..||.:.|:..|     
  Rat   187 PDSSLL-----HSSSHVDCSPWMKRFHRGPPCSAC-------------PFVKARWDQQQK----- 228

  Fly   453 SPAHKKLQTRMEHMRKFRRQHEQLRTVILRVLRPTKPAVGDDGNVVETKQPYSLDAADANAIEEV 517
                |:|.|             .||.:.|..|:.....||.:..:.||....||.........::
  Rat   229 ----KELAT-------------WLRPLTLPELQHCLGIVGAEVALEETPWLDSLSLLPLALATDI 276

  Fly   518 NLAYENVKEVDCLDITKEG------SEAWEAAVKRYEEKIDRVETRITAHLRDQLGTAK------ 570
            .:.||: .::...:....|      |||.|.|:||...:...:.:::.:.|:......|      
  Rat   277 PVQYES-SDIGHAEPAPAGRKPQLASEAPEKALKRKSPRTSILRSQVKSLLKGDWSQKKIHFLYL 340

  Fly   571 -------------------NANEMFRIFSRFNALFVRPHIRGAIREYQTQLIQRVKDDIEALHEK 616
                               ..|....|||.|..|.:.| :.|:    :|..:.....|....||.
  Rat   341 NVASDRHFNPYKLVVVPPNKVNPEHYIFSPFGILHIHP-VEGS----ETMSLATWHRDTALWHEL 400

  Fly   617 FKVQYPQSKSCRLSSVRDLPPVAGSIIWARQIDNQLTMYLKRVEDVLGKGWETHIEGQKLKADGD 681
            .::  |..|:|.|..        ....|.:   |.....|.|::..|    :||:    |.|...
  Rat   401 QRI--PFFKNCLLRK--------ALTCWKK---NVRFRGLHRIQTFL----KTHL----LLAIPH 444

  Fly   682 SFRAKLSISDVFHE-----WARKVQERNFGSTGRIFTIESTRSRIGRGNVLRLRV-----NFLPE 736
            .....|.|:.:..|     |..|..:::       :.:...:..|.:.|...|||     |....
  Rat   445 FGAGMLHINRLLQEFRSVSWLPKEPDKS-------YVLRDLKKAIAKENHRALRVLCHFLNLCAS 502

  Fly   737 IITLAKEVRNIKNLGFRVPLTIVNKAHQA-NQIYPYAISLIESVRTYERTLEKLNNRS---LAQN 797
            |:.|..|.......|.:..:...|:..:: ..||        ..||..|.|||...::   |::.
  Rat   503 ILQLIHEDTYQMQQGLQERVQNWNRIRKSQGSIY--------LQRTLCRHLEKKLKQAETWLSKL 559

  Fly   798 SVF-KIEDRASIVPLVAGLRKDVLNLVSEGIGLIWESYKLDPYVIRLSECVTQFQEKVDDLLVVE 861
            .:| ::.|......||:.|..::.:.::..:    ::.:.:|:::  |:.|.....::..:..||
  Rat   560 GMFARLIDYMICQNLVSILEDEITSFIANNL----QAPRQNPFLV--SQLVFDDNGQLSPMPRVE 618

  Fly   862 EQLDVDVRSLETCPYSAATFVEILSKIQHAVDDLSLRQ--YSNLSVWVTRLDEEVEKKL------ 918
            ..:...::||::...||.       |:..:.|..:.|:  ||.     ...|::...:.      
  Rat   619 SIIQSLIKSLQSIKTSAL-------KVMQSTDLRTSREPLYSE-----DNKDQDSNTEFPMPKFH 671

  Fly   919 -----ALRLQAG-----IQAWTEALTGNKKEVDTSMDTDAPAQPTHKLGGDPQIQNAVHEIRITN 973
                 |:||..|     :..|......|..||           ..|:|.|               
  Rat   672 GKSSDAVRLFCGPNVGYVWPWKSHAITNVLEV-----------RGHRLRG--------------- 710

  Fly   974 QQMYLYPSIEEARFQIMQQFFAWQAIVTSQVRLQSTRYQVGLEKHVSQTYRNLLTKLPEGKILEN 1038
              .||:|:.:..:..:.:.....||:...|..|:..|.:|       |.:.|.            
  Rat   711 --QYLHPNYDHVQEDLDKNAGIQQALAVQQALLEDMRQEV-------QEFCNK------------ 754

  Fly  1039 AYGAIEQKVSEVRNYVDEWLRYQSLWDLQADMLYGRLGEDVNLWIKCLNDIK--QSRTTFDTSDT 1101
                 :|.|.::..::..| ..|.|.||:        |..::.::|.:..:|  |.|.:....:.
  Rat   755 -----QQWVEDIYEFLKAW-NSQKLEDLR--------GSPISDYVKLVRKLKNWQERVSNMPVEL 805

  Fly  1102 RRAYGPIIIDYAKVQAKVTLKYDSWHKEALGKFGTLLGTEMTSFHSKVSKSRTDLEMQSIEAAST 1166
            ......:::....||.::..|.::..|..|.:    :..|..|.:.::.|..|:           
  Rat   806 LTKTKLLLLSGRDVQEELESKLNNLRKNILEQ----VKNECWSRNQQLMKKLTE----------- 855

  Fly  1167 SDAVSFITYVQSLKKDMIA-----------------WDKQVEVFREAQRILERQRFQF--PNTWL 1212
                 |:...|::..|:.|                 .::|||..|....::......|  .|..|
  Rat   856 -----FLRVFQTINLDIHAIAQCSQKLNEANEQYCHLEEQVEYVRSLHDLIRNHCVLFISENETL 915

  Fly  1213 HVDNIEGEWSAF-------NEIIKRKDTAIQTQVASLQAKIVAEDKAVETRTVD--FLNDWEKTK 1268
            .:..:: .|.||       :|.:..|..||..::..|.|..:||.:.:..:.:.  |::..::.:
  Rat   916 DIALLD-LWEAFQFERSQVSEFLLSKRHAIVPKLQQLMAAALAELEGLLVKALSGPFMDPSQEQR 979

  Fly  1269 PTGGKIRPDDALQQLQIFESKYSRLKEERDNVVKAKEALELQESAV-PNNSAERMNVALEELQDL 1332
            .|.         |||...|:::.......:.:..|..:....::.: |..|..|..|..:.:..|
  Rat   980 STE---------QQLGALENQFLNTLSNFNALCYAYRSFTGHKTTMSPPASGNRPIVLQQRIWRL 1035

  Fly  1333 RGVWSELSKVWT-------QIDETREK--PWLSVQPRKLRQQLEAMMAQLKELPAR-LRMYESYE 1387
            ..:..|....|.       .:...|||  .||:...|     |...:.|...:..| :||.|.: 
  Rat  1036 YRIIHENFSEWKCVAFSKFNLSMAREKTNAWLTEAAR-----LGTALGQQSPVLQRCMRMLEEF- 1094

  Fly  1388 YVKKLIQSYIKVNMLIVELKSDALKERHWKQLTKQLRVNWV--LSDLSLGQVWDVNLQKNEGIVK 1450
                  ::|:.   |:::|.|..|::.:.:.|.:.|.:..:  |..|:||::.:..|.:....:.
  Rat  1095 ------RAYLP---LLIKLGSLELQDVNTQSLLRALGLGGLQSLDLLTLGRLLNCPLLEFADRIN 1150

  Fly  1451 DIILVAQGEMALEEFLKQVRESWQNYELDLINY------------QNKCRIIRG--W-------- 1493
            .:....:..:..:|.|:|:::.|:..:|.|:|:            ::|...:|.  |        
  Rat  1151 QVWQRDKERIHAQEILQQMQQYWEGRQLRLLNFILQVPYRPPTSERSKRPALRSPQWELVGKDSG 1215

  Fly  1494 -----------DDLFNKVKEHINSVAAMKLSPYYKVFEEEALTWEEKLNRINALFDVWIDVQRRW 1547
                       |.:.|.::.....:|..|....:|:    ||.|...:..:.||.:||:..|::|
  Rat  1216 TFLLSDYSSLQDAIQNSLQALFKILAIQKSGQLHKI----ALEWVTIMYDLGALLEVWVSFQQKW 1276

  Fly  1548 VYLEGIFSGSADIKTLLPVE--TSRFQSISSEFLGLMKKVTKSPKVMDVLNIPAVQRS------- 1603
            ::|..:..   :::...|..  .:||:.:..::..||:.....|.|:.:: :|..:||       
  Rat  1277 IFLNKVLH---EMEIEFPAAELNARFKVMDDQYRTLMRISVADPMVLSLI-VPNTKRSPYFQGQH 1337

  Fly  1604 LERLADL----LGKIQKALGEYLERERTSFPRFYFVGDEDLLEIIGNSKNIARLQKHFKKMFAGV 1664
            |:.|..:    |..|...|.:.|...|.:|||.:|:.|.:|:.::.:..:.:..:...::.|..:
  Rat  1338 LQHLLKVGSVELEAIIMGLEDVLYGVRANFPRLFFLSDSELVALLASPLDTSEAKPWAQRCFPYI 1402

  Fly  1665 AAI-----LLNEENNVILGISSRE-----------GEEVHFMNPVSTVEHPKINEWLSLVEKQMR 1713
            .|:     ..|:|||.....||.|           ||||....|:..  :|.:.:||:.:|..:|
  Rat  1403 KAVNFRSKSTNKENNDKDSKSSIETVETISVLGACGEEVKLQEPLPL--YPDLPKWLASLETCLR 1465

  Fly  1714 FTLASL--------LAQAVQDIKQFR----DGKIDPQAYME-WCDKYQA---QIVVLAAQILWSE 1762
            ..:.:|        |||....||..:    ..::..|.|:: |.|..|.   |.:::|.:|:|..
  Rat  1466 LVVVNLLQSCVATRLAQGPSLIKALKAMPQQRQMSTQLYVQHWLDAVQVFPWQCILVAEEIVWRA 1530

  Fly  1763 DVESALQQASENNQSKPMQRVLGNVE-STLNVLADSVLQEQ--------PPLRRRKL-EHLINEF 1817
            ::|.||.      :||.|:  |.:|. ..|.||...:..::        |.:|:..| ..|:.:.
  Rat  1531 EMEEALL------ESKTMR--LSSVHVRNLEVLVQFIRSQRSSQGEQPLPSVRQTSLFSSLLVKA 1587

  Fly  1818 VHKRTVTRRLLNNGVTSPKSFQWLCEMRFYFDPRQTEV---LQQLT----------------IHM 1863
            |..|.:.:.|..|.|:....|.|:.:::::.......:   ||.||                |.:
  Rat  1588 VTHRDIAQLLEKNQVSDLTDFHWVRQIKYHLGSSHLNLKSPLQCLTTTASTEEPSVSPAACWIDV 1652

  Fly  1864 ANARFFYGFEYLGVQDRLVQTPLTDRCYLTMTQALESRLGGSPFGPAGTGKTESVKALGNQLGRF 1928
            ....|.|.:||:|.:...:.:.:.:|....:..||.....|:..|..|.||.|:|.:|...|||.
  Rat  1653 LGRSFLYNYEYMGPKLGPLPSLMHERQVFILLLALNEVAYGAVLGRDGLGKAETVNSLAWALGRQ 1717

  Fly  1929 VLVFNCDETFDFQAMGRIFVGLCQVGAWGCFDEFNRLEERMLSACSQQIQTIQE--ALKYEMDSN 1991
            :::..|....:|:.:.....|..|.|||...:..::|...:|||..|::..:..  |..|: .::
  Rat  1718 LVIMPCLPQIEFRCLSNYLNGALQCGAWLLLENVHQLPSGLLSALGQRLDELHHLYAPLYQ-KAS 1781

  Fly  1992 KESITVE-----LVG------KQVRVSPDMAIFIT---MNPGYAGRSNLPDNLKKLFRSLAMTTP 2042
            |...|:.     |:|      .||.|......|:|   ::|      ::|.||..|.|.:|:..|
  Rat  1782 KNISTINPTKHLLLGAGFFEKHQVSVRLGFGCFLTFHSLSP------DVPANLHLLLRPVALAFP 1840

  Fly  2043 DRQLIAEVMLFSQGFRSAEKLACKIVPFFKLCDEQLSNQSHYDFGLRALKSVLISAGNVKRDRIM 2107
            |.|.:||:.|...|.|.|.::|.::...|.|..|.:|..  ....|..||.||.:.     ...:
  Rat  1841 DLQRVAELQLLGAGVRDASRMATRLSKLFSLERELVSGT--LPSRLPLLKQVLENT-----IETL 1898

  Fly  2108 KIKEQMKQRGDENIDEASVAENLPEQEILIQSVCETMVPKLVAEDIPLLFSLLSDVFPNVGYTRA 2172
            ...|:.|.:...|:   :.||.......|:.|...|::..|   .:..|..||..:|||..:..|
  Rat  1899 NASEENKSQQPHNL---AAAEEAALLRALLHSPLFTILDGL---RLQKLQELLCGIFPNASHVLA 1957

  Fly  2173 E------MKG-LKEEIRKVCQEDYLVCGEGDEQGAAWMEKGLGSTWVDKVLQLYQIS---NLNHG 2227
            |      ||. :.||::::                     ||..| ::.:..|.|:|   :...|
  Rat  1958 EPVCHRLMKSVVVEELQQL---------------------GLFPT-LNTLTSLEQLSEALSKASG 2000

  Fly  2228 LMMVGPSGSGKSTAWKTLLKALER-----------FEGVEGVAHVIDPKAISKEALYGVLDPNTR 2281
            ::::|.:||||||.||:|.|...|           |:.||.| |:. |..::.:...|..:.:: 
  Rat  2001 ILLLGTAGSGKSTCWKSLFKIQNRLAAMEHTSTKGFQSVETV-HLY-PSVLTSQEYLGWSEGSS- 2062

  Fly  2282 EWTDGLFTHILR-----KIIDNVRGEINK-------RQWIIFDGDVDPEWVENLNSVLDDNKLLT 2334
             |..|:||.:|.     |.:    |...|       :||||.||..:..|::::..:|.|...|:
  Rat  2063 -WRYGIFTKLLHAAPYCKTV----GSEEKSERFTGIQQWIICDGAPNHAWLDSITCLLADPPQLS 2122

  Fly  2335 LPNGERLSLPPNVRVMFEVQDLKFATLATVSRCGMVWFSED--------VLSTEMIFENYLSRLR 2391
            ||||::::.|.....:.||.:....:...:.||.:||...:        ||.|.:..|.:|.:..
  Rat  2123 LPNGQQIARPLGTFFLIEVAEAAGMSPTVLGRCALVWCCGEQTWQSMLSVLITSLPHEYHLQQET 2187

  Fly  2392 SIPLEDGDEDFVGVIKPAKDK-EEEVSPSLQVQRDIALLLLPFFSADGIVVRTLEYAMDQE-HIM 2454
            .:......|    |:.|:..: ...:..|.|:|......:.|..:....::|.|...:|.. |:.
  Rat  2188 IVQFNHLAE----VLVPSVFRFLTRIGASSQLQVHGHQAVCPGVAEVTSLIRILRALLDPHLHLF 2248

  Fly  2455 ---------DF------------TRLRALSSLFSMLNQAARNVLTFNAQHPDFPCSADQLEHYIP 2498
                     ||            ::.:|.|...|:..:..|::|..:                  
  Rat  2249 EEEKPHTKEDFSGTDLVTQNFISSKSKAQSDRISVYKKERRHLLAIS------------------ 2295

  Fly  2499 KALVYSVLWSFAGDAKLKVRIDLGDFVR----SVTTVPLPGAAGAPIIDYEVNM-SGDWVPWSNK 2558
             :.:::::|.|......:......||:|    |:...|.| ...|.:.|..:|: .|..||::.:
  Rat  2296 -SFLFAIIWGFGAHLSSRHWPLFDDFMRKAISSLPNYPEP-PPSALVFDLHINLEDGTLVPFTGQ 2358

  Fly  2559 VPVIEVETHKVASPDIVVPTLDTVRHESLLYT---WLAEHKPLVLCGPPGSGKTMTLFSALRALP 2620
            .    :.||...|.....|:...   |.|||.   .|:..:|::|.|...:||  :.|..:...|
  Rat  2359 Y----LSTHVKRSLGSFQPSSQV---EQLLYVVDLLLSNGQPVLLAGEIATGK--SAFVEVLVEP 2414

  Fly  2621 DMEVV------GLNFSSATTPELLLKTFDHYCEYRKTPNGVVLSPVQIGKWLVLF-CDEINLPDM 2678
            :...:      .||  ||....||.:..     :.:|..|..:.|.|..|..:|| .::::|...
  Rat  2415 NHPTIHRPINPALN--SAHLRNLLSRAV-----HGQTQAGSFVGPHQDSKGSILFLMEDLHLAAF 2472

  Fly  2679 D-SYGTQRVISFLRQLVEHKGFYRASDQAWVSLERIQFVGACNPPTDPG--RKPLSHRFLRHVPI 2740
            | ....|.|:..|||.:|...:...:.:.......:.|:...   |.||  .:||..|..|...:
  Rat  2473 DPEKSCQPVLETLRQAMEGTIYSHNTLELQTLQPTVNFLATA---TVPGYSERPLCPRLYRLFTV 2534

  Fly  2741 IYVDYPGETSLKQIYGTFSRAMLRLMPAL---RGYAEPLTNAMVEFYLASQDRF-TQDMQPHYVY 2801
            :.::...:.:|...:....:|.|...|::   ...|..|..|.||.:.|..:.| ...:.|||.:
  Rat  2535 LALNSMTQDTLLSRHVPSIQAWLERFPSVEREHTLARALVRASVEAWEAVCNCFMPSPLHPHYRF 2599

  Fly  2802 SPREMTRWV------------RGICEAIRPLDSL-PVEGL--------------VRLWAHEALRL 2839
            ||..::..:            ||..::....:.| .|.||              ||||.|||.|.
  Rat  2600 SPHSVSHILGSLQLLPTRMGSRGFVDSFHHQEHLRRVSGLRGTRLTIMMSMRVMVRLWLHEAQRT 2664

  Fly  2840 FQDRLVDDSERRWTNENIDLVGQKHF-----------------------PGINQEEALQRPILYS 2881
            |.|||..|.||....:.:..|.|:.|                       |.:..||.:....:.|
  Rat  2665 FCDRLDSDRERSHCVKLLLEVAQRVFCSVPGSESLARVCEEEEVEEEKVPEVESEEEIAHWEILS 2729

  Fly  2882 N--------------------WLSKDYM------PVNRE--------------------ELREYV 2900
            |                    :||:..:      .||:|                    :|:...
  Rat  2730 NSDSGSEEEEDPFGLQATTGSFLSESGLAPLPIKSVNKENTENVSQVAQQLEDIRNSNSKLQSET 2794

  Fly  2901 HAR-----------------LKVFYEEELDVPLVLFDE--------------------------- 2921
            |.|                 :.:||.:|....||...|                           
  Rat  2795 HKRKWQRAPQTDLSLPLLLPVLLFYPQENPSDLVFSLELTLGSNFESPNLYLERQWENLEKQLAA 2859

  Fly  2922 ----------------VLDHVLRIDRIFRQPQGH-LLLIGVSGAGKTTLSRFVAWMNGLSIFQIK 2969
                            ::.||.|:.|:..:|:.| |||....|.|:.|     |.:...:|.|.:
  Rat  2860 SAVQLKMNSDFAQCHVMVQHVARLVRVLARPRQHGLLLSEFRGTGRNT-----AIILASNICQAR 2919

  Fly  2970 V-HNKYTSED-FDEDLRCVLRRSGCKDEKIAFIL-DESNVLDSGFLERMNTLLANGEVPGLFEGD 3031
            : |..:.||: ..:.||.....:|..::.:|.:: |:.||  :.|.:.: .|..:|..|     |
  Rat  2920 LFHLPFESEEAVFQCLRDASWHAGVLNQSVALLVPDQVNV--ATFCQLL-ALATSGSFP-----D 2976

  Fly  3032 EYTTL-MTQCKEGAQREGLMLDSS---DELYKWFTQQVMRNLHVVFTMN--------PSTDGLKD 3084
            :||.. :...:|...:|.|:...|   |.:...|.|||..|||:.|.|.        |||..|..
  Rat  2977 QYTEADLDNIEEHLPKENLVNKYSIKKDTVLNRFYQQVCSNLHMFFLMEDDQVQKQLPSTLFLSL 3041

  Fly  3085 RAATSPALFNRCVLNWFGDWSDSALFQVGK---EFTTRVDLEKPNWHAPDF---FPSVCPLVPAN 3143
            ...|..:      ::.:..|..::|.:|.:   |....:.|:..:...|||   .|:|     ||
  Rat  3042 LQLTIAS------VDRYEPWDQASLVRVAQFRLENDQSLPLDDGSLKCPDFKILIPNV-----AN 3095

  Fly  3144 PTHRDAVINSCVYVHQTLHQANARLAKRGGRTMAVTPRHYLDFIHHFVKLYNEKRSDLEEQQLHL 3208
            ...|  :..|..|.||  |...|        ...||||.:.||:..|::         ::||:.|
  Rat  3096 IMAR--IHGSSAYYHQ--HMCPA--------LPLVTPRTFQDFLDMFLQ---------QQQQMVL 3139

  Fly  3209 NVGLNKIAETVEQVEEMQKS--LAVKKQELQA-------KNEAANAKLKQMFQDQQEA-----EK 3259
            .:.:.     ..:::...|:  |.|::...|.       |....:.|...|:|.|.|.     ::
  Rat  3140 QMRMR-----ARRIQSALKTLRLLVERHSTQTSMLTDLEKQLKGSYKNVGMYQGQLEQCKILYKQ 3199

  Fly  3260 KKIQSQEIQIRLADQTVKIEEKRKYVMADLAQVEPAVIDAQAAVKSIRKQQLVEVRTMANPP-SV 3323
            |..:.|.::..:.:.|.:.:..:....|.|.|:..|.:   ..:..:|.....|:|:...|| ||
  Rat  3200 KMAECQHLESLIENLTRQHDALKAQQEAFLEQMGKAFV---GPLSQLRVADFEEIRSYRAPPESV 3261

  Fly  3324 VKLALESICLLLGENATDWKSIRAVIMRENFINSIVSNFGTENITDDVREKMKSKYLSNPDYNFE 3388
            ||:. :::|.|. .:.|.|.|.:.::..|:|...:|. |..|.:.|....|: |:.|..|..:..
  Rat  3262 VKVT-DALCDLF-HHETGWSSAKQLLCTEDFYQELVF-FPKEKLMDSELAKL-SQALRAPGMSDA 3322

  Fly  3389 KVNRASMACGPMVKWAIAQIEYADMLKRVEPLREELRSLEEQADVNLASAK--------ETKDLV 3445
            .:...|:....:..|..|.:.|....:|..|....||    |.|..||..:        :..||:
  Rat  3323 SLRSVSIPAANLAVWLRAVLRYGLAQRRGLPTGLLLR----QVDATLAREQARLGQFQFQAHDLL 3383

  Fly  3446 EQLERSIAAYKEEYAQLISQAQAIKTDLENVQA----KVDRSIALLKSLNIERERWESTSETFKS 3506
            :|.:  ....|.|.||| |....::| |...|.    :.....|||..:::    |.:..:..:.
  Rat  3384 QQTQ--FLTKKLEDAQL-SHNHVVET-LNQAQCGHFHRWPMKSALLTPMHM----WTTQLQKLQE 3440

  Fly  3507 QMSTIIGDVLLSAAFIAYGGYFDQHYRLNLFTTW----------------SQHLQAASIQYRAD- 3554
            |..|:.||.||.:|.|.|.|.|....|..|...|                :|.|:..|::...: 
  Rat  3441 QAKTVFGDALLCSAAIVYLGPFPPQRRQELLEKWLSLCQGFEEALDPDDVAQALRQKSVRVSKNP 3505

  Fly  3555 --IARTEY-----LSNPDERLRWQANALPTDDLCTENAIMLKRF-----NRYPLIIDPSGQATTF 3607
              ..||.:     ||...|:.:|..:..|.........::|:..     :|:||::|||.||..:
  Rat  3506 LLPTRTPFRILTLLSCGSEQHQWDRDLKPQAKSARLLGLLLRSHIHFSSSRWPLLLDPSNQAIIW 3570

  Fly  3608 L--------------LNEYAGKKITKTSFLDDSFRKNLES------------------------- 3633
            |              ..|...|........:|.....|||                         
  Rat  3571 LNPLPPKQNKWLEQPPKESRAKYHVTNQDSEDETEDELESENNEDEDEVSEQREEHKTEENESEE 3635

  Fly  3634 ----------------ALRFGN----PLLVQDVENY-------DPILNPVLNRELRRTGGRVLIT 3671
                            :...|:    |...|.:.:|       ||.|.|.| .|....|..||:|
  Rat  3636 ENKQEEQETEKENEAESTSSGSSSSPPSETQCLPSYLTVLSGTDPELGPQL-LEAAANGLPVLLT 3699

  Fly  3672 -----LGDQDID------------LSPSFVIFLSTRDPTVEFPPDICSRV---------TFVNFT 3710
                 ||.|::.            :.|.|.:||||     .||.....||         ..::..
  Rat  3700 NMELSLGCQELQWLLSKKNLIPPYVQPGFCLFLST-----TFPIHALDRVLGYELLKGLNVLDLG 3759

  Fly  3711 VTRSSLQSQCLNQVLKAERPDIDEKRSDLLKLQGEFRLRLRQLEKSLLQAL---NDAKGKILDDD 3772
            :....|:.|.|:::|..|||:::.:..||.....|....::..|:.||..|   |..:.|   ..
  Rat  3760 LNMEILEEQMLHEILCRERPELETRWQDLKVRAAENYEAMKADEEQLLVILLRQNKMRQK---PS 3821

  Fly  3773 SVITTLETLKKEAYDINQKVDETDKVIAEIETVSQQYLPLSVACSNIYFTMDSLNQVHFLYQYSL 3837
            ..:..:...:.:...:|.:.:|.|:...|:..:...|..::      |..|..:..:.     ||
  Rat  3822 RFLREMVRTQAKICQLNAQGEELDEQKLEVAALWAPYRQVA------YHGMAMVEALS-----SL 3875

  Fly  3838 KMFLDIFSTVLYNNPKLEGRTDHSER-LGIVTR--DLFQVCYERVARGMIHIDRLTFALLMCKIH 3899
            :..|..|..             .||. |.::.|  |..:.|      ...|.:.|...||..|||
  Rat  3876 QNLLPFFCM-------------KSENWLAVIRRAIDSMKSC------DSYHGEDLPSHLLRMKIH 3921

  Fly  3900 LKGTSESNLDAEFNFFLRSREGLLAN--------PTPVEG----LSAEQIESVNRLALRLPIFRK 3952
            |                 :|: ||.|        .||:.|    |:..|:........||.::..
  Rat  3922 L-----------------ARQ-LLINTVVALGLIQTPLVGAFGALAMLQVTKKTPKLERLALWPG 3968

  Fly  3953 LLEKVRS-----IPEL--GAWLQQSSPEQVVPQLWDESKA---LSPIA----------------- 3990
            ||....|     ||.:  .|||..        :.|:|..|   |||.|                 
  Rat  3969 LLASPSSGHNIQIPGVTRPAWLSS--------RAWEECGALELLSPFAGLRASLASHSDVWQDYL 4025

  Fly  3991 ------------------SSVHQLLLIQAFRPDRVIAAAHNVVNTVLGEDFMPNAEQELDFTSVV 4037
                              |...:|:|.:..|||.::.|..::..::||...    :::||..:::
  Rat  4026 SLSSTVLGPAPGPNSEPLSLFQKLILWRVLRPDCLVGALADLTTSLLGRPL----DEDLDAPTMI 4086

  Fly  4038 DKQLNCNTPAL-LCSVPGFDASGR-----VDDLAAEQ--NKQISSIAIGSAEGFNQAERAIN--- 4091
            ...:....|.| |...||...:..     :..|||.:  .|::..||:|| |.::.....:|   
  Rat  4087 FDHIQPTQPILILLPPPGHPTATLHPVTVIRKLAASEKPQKRLHVIALGS-EDWDPVSTVVNTLS 4150

  Fly  4092 MACKTGRWVLLKNVHLAPQWLVQLEKKMHSLQPHSGFRLFLTMEINPKVPVNLLRAGRI-----F 4151
            .|...|.|::|.|.||.|.|..:|      |||..|                ||...::     .
  Rat  4151 QAMLQGHWLVLDNCHLMPFWPREL------LQPLQG----------------LLDGAKVVSDSEL 4193

  Fly  4152 VFEPPPGIRANLLRTFSTVPAARMMKTPSERARLYFLLAWFHA-------IVQERLRYVPLGWAK 4209
            :.||..       ||.:||          .|....:|:|...|       :.|..:   |:.|.:
  Rat  4194 IAEPES-------RTVATV----------HRDFRLWLIASTEASTSLPGVLTQHSM---PVFWNQ 4238

  Fly  4210 KYEFNESDLRVACDTLDTWIDTTAMGRTNLPPEKVPWDALVTLLSQSIYGGKID---NDFDQRLL 4271
            ..|..    |:..|::|:..:.:....|...|....:..||   .:.:||.|:.   ..:.|..|
  Rat  4239 SLELG----RILIDSVDSQQELSTQSFTQTFPLFFLYGLLV---HRQLYGLKLQAHRGRWSQVTL 4296

  Fly  4272 TSFLKKLFTARSFEADFALVANVDGASGGLRHITMPDGTRRDHFLKWIENLTDRQT--------- 4327
            |..|      :..|..:|.::|...|...|....:..|..||        |.||:|         
  Rat  4297 TRVL------QIQEQLWASLSNPSAALLELAASVLYGGPLRD--------LEDRETLVSLTGACL 4347

  Fly  4328 ----PSWLGLPNNAEKVLLTTRGTDLVSKLLKMQQLEDDDELAYSVEDQSEQSAVGRGEDGRPSW 4388
                .:|: .|:..:.:|.|...:   .:|.::....|.....:.:...||....|..| |..:|
  Rat  4348 NPRNMNWV-QPHTPQYLLATLMPS---PELGELDARTDCKAQMHLLPTPSEPRTCGLNE-GPQAW 4407

  Fly  4389 ---------MKTLHNSATAWL-------------ELLPKNLQVLKRTV----------------- 4414
                     :..|...::.|:             .|..:.:|..||.|                 
  Rat  4408 LLRRQSRALLSALRQCSSTWVPTVCGGIVQRKERRLRQRLVQAKKRLVALQALLTNNRYRSGQCV 4472

  Fly  4415 -------ENIKDPLYRYFEREVTSGSRLLQTVILDLQDVVLICQGEKKQTNHHRSMLSELVR--- 4469
                   .|.:.||..:.|.||.   .|.|.|.:.|:|:..:.|..|.:|....|..:|:.:   
  Rat  4473 TPWAVLGPNARPPLEGFLETEVL---ELKQLVGMLLRDLDCLLQQLKGKTPCTSSRCAEVAQALW 4534

  Fly  4470 -GIIPKGWKRYTVPAGCTVIQWITDFSNRVQQLQKVSQLVSQ---AGAKELQGFP---VWLGGLL 4527
             |.:|:.|:.: .||| ..:.|:.     ::||.:...|:.|   :|..|....|   ..|....
  Rat  4535 AGRLPQPWRSH-APAG-PQLPWLW-----LRQLSRRGHLLIQYLDSGISENANGPERIFHLSAFR 4592

  Fly  4528 NPEAYITATRQCVAQANSWSLEELALDVTITDAGLKNDQKDCCFGVTGLKLQGAQCKNNELLLAS 4592
            :|...:.|.|        |   |..|:.:.....|...|..   |...|..:..:..|:.|.:  
  Rat  4593 HPRRLLLALR--------W---EAVLENSGHSPKLPGHQGS---GSGNLPPRRQELNNHPLHI-- 4641

  Fly  4593 TIMMDLPVTILKWIKISSEPRISKLTLPVYLNSTRTELLFTVDLAVAAGQES 4644
                        |::....|::.|:.|          ||..:.|..||..::
  Rat  4642 ------------WVENGPNPKVPKMGL----------LLIGLQLQHAAWDQT 4671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhc64CNP_001261432.1 DHC_N1 240..839 CDD:285571 120/653 (18%)
DYN1 1022..4338 CDD:227570 843/3995 (21%)
DHC_N2 1326..1724 CDD:285579 98/479 (20%)
P-loop_NTPase 1870..2103 CDD:304359 67/248 (27%)
P-loop_NTPase 2227..2367 CDD:304359 45/162 (28%)
P-loop_NTPase 2572..2835 CDD:304359 68/306 (22%)
Cas4_I-A_I-B_I-C_I-D_II-B 2834..>2943 CDD:294426 41/238 (17%)
P-loop_NTPase 2916..3194 CDD:304359 80/342 (23%)
MT 3208..3544 CDD:289543 85/378 (22%)
AAA_9 3569..3784 CDD:289547 61/314 (19%)
Dynein_heavy 3925..4636 CDD:281078 173/862 (20%)
Dnhd1XP_008758037.1 DHC_N2 1026..1476 CDD:285579 96/474 (20%)
P-loop_NTPase 1659..1877 CDD:304359 61/224 (27%)
P-loop_NTPase 2374..2660 CDD:304359 67/300 (22%)
P-loop_NTPase 2877..3126 CDD:304359 74/284 (26%)
MT <3198..3475 CDD:289543 72/295 (24%)
AAA_9 <3672..3810 CDD:289547 36/143 (25%)
Dynein_heavy 3987..4746 CDD:281078 163/814 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5245
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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