DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7509 and LGR5

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_003658.1 Gene:LGR5 / 8549 HGNCID:4504 Length:907 Species:Homo sapiens


Alignment Length:448 Identity:124/448 - (27%)
Similarity:179/448 - (39%) Gaps:94/448 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 LATGSQIEWNHCTSGV--------CRCNPDTKSF---TCWNTNLKSVPVTQVIPMNMVNIDLSRN 191
            ||||.    :...|||        |.|.||.:..   .|.:..|..:|..  :.:....:|||.|
Human    18 LATGG----SSPRSGVLLRGCPTHCHCEPDGRMLLRVDCSDLGLSELPSN--LSVFTSYLDLSMN 76

  Fly   192 ILSTLHKDTFRGLTVLKELDISHNVLDFLPFDLFQDLDSLLVLRIQNNQLEDIDHRTFWKLRNLN 256
            .:|.|..:....|..|:||.::.|.|.::|...|..|.||.||.:|||||..:.......||:|.
Human    77 NISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQ 141

  Fly   257 ILDLSKNEIGMLPESIF--YHAQR----------------------------------------- 278
            .|.|..|.|..:|.|.|  .|:.|                                         
Human   142 SLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAF 206

  Fly   279 -----LTVINMCDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIA 338
                 |.|:::.:|:|.:...........||.||::.|.:.|..: :||.|:.||.|.|..|.|.
Human   207 GNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIRTLSNLKELGFHSNNIR 270

  Fly   339 KIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNL-----------------------ANLVTLDL 380
            .|.:..|.|..||.|:..::|.|..:..:.|.:|                       |||.:|.|
Human   271 SIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLTGTANLESLTL 335

  Fly   381 TTNRISHIDGNAFVELNNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDFQGLN 445
            |..:||.:......:|.||..|.|..|.:..:|:  |.....|.::.|..|.:..::.|.||.|.
Human   336 TGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRHNEIYEIKVDTFQQLL 398

  Fly   446 NLKILLLNNNILKNFDARAFEPLSQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKN 503
            :|:.|.|..|.:......||..|..|.||.:.||.|...|...||||.:|   ||..|
Human   399 SLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPITGLHGLTHL---KLTGN 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 22/58 (38%)
leucine-rich repeat 187..206 CDD:275380 7/18 (39%)
LRR_RI <201..386 CDD:238064 65/255 (25%)
leucine-rich repeat 207..230 CDD:275380 8/22 (36%)
leucine-rich repeat 231..254 CDD:275380 9/22 (41%)
LRR_8 253..313 CDD:290566 20/107 (19%)
leucine-rich repeat 255..278 CDD:275380 9/24 (38%)
leucine-rich repeat 279..302 CDD:275380 4/22 (18%)
LRR_8 303..361 CDD:290566 22/57 (39%)
leucine-rich repeat 303..326 CDD:275380 9/22 (41%)
leucine-rich repeat 327..350 CDD:275380 9/22 (41%)
LRR_8 349..407 CDD:290566 20/80 (25%)
LRR_4 350..390 CDD:289563 15/62 (24%)
leucine-rich repeat 351..374 CDD:275380 6/45 (13%)
leucine-rich repeat 375..398 CDD:275380 7/22 (32%)
LRR_8 398..>443 CDD:290566 12/44 (27%)
leucine-rich repeat 399..422 CDD:275380 6/22 (27%)
leucine-rich repeat 423..443 CDD:275380 5/19 (26%)
leucine-rich repeat 471..494 CDD:275380 11/22 (50%)
LRRCT 503..554 CDD:214507 1/1 (100%)
LGR5NP_003658.1 LRRNT 33..70 CDD:214470 7/38 (18%)
leucine-rich repeat 68..91 CDD:275380 7/22 (32%)
PLN00113 71..>426 CDD:215061 96/357 (27%)
leucine-rich repeat 92..115 CDD:275380 8/22 (36%)
leucine-rich repeat 116..139 CDD:275380 9/22 (41%)
leucine-rich repeat 140..163 CDD:275380 8/22 (36%)
leucine-rich repeat 164..187 CDD:275380 1/22 (5%)
leucine-rich repeat 188..211 CDD:275380 0/22 (0%)
leucine-rich repeat 212..235 CDD:275380 4/22 (18%)
leucine-rich repeat 236..258 CDD:275380 9/22 (41%)
leucine-rich repeat 259..282 CDD:275380 9/22 (41%)
leucine-rich repeat 283..304 CDD:275380 5/20 (25%)
leucine-rich repeat 307..353 CDD:275378 9/45 (20%)
leucine-rich repeat 354..375 CDD:275378 6/22 (27%)
leucine-rich repeat 376..389 CDD:275378 3/12 (25%)
leucine-rich repeat 400..423 CDD:275378 7/22 (32%)
leucine-rich repeat 445..459 CDD:275378 5/12 (42%)
7tmA_LGR5 558..831 CDD:320485
TM helix 1 559..585 CDD:320485
TM helix 2 592..617 CDD:320485
TM helix 3 637..667 CDD:320485
TM helix 4 679..701 CDD:320485
TM helix 5 721..750 CDD:320485
TM helix 6 759..789 CDD:320485
TM helix 7 799..824 CDD:320485
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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