DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and Slit3

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_112611.1 Gene:Slit3 / 83467 RGDID:69311 Length:1523 Species:Rattus norvegicus


Alignment Length:554 Identity:135/554 - (24%)
Similarity:220/554 - (39%) Gaps:125/554 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 RCNPDTKSFTCWNTNLKSVPVTQVIPMNMVNIDLSRNILSTLHKDTFRGLTVLKELDISHNVLDF 219
            :|.....|..|....|::||  :.||.|...:||.||.::.:.|..|.|                
  Rat    37 KCTCSAASVDCHGLGLRAVP--RGIPRNAERLDLDRNNITRITKMDFTG---------------- 83

  Fly   220 LPFDLFQDLDSLLVLRIQNNQLEDIDHRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTVINM 284
                    |.:|.||.:::||:..|:...|..|:.|..|.|:||::.:|||.:|....:||.:::
  Rat    84 --------LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDL 140

  Fly   285 CDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFAGLR 349
            .:||||..|....|....::.|.:..|.||.:..|:.|.|..|:.|....|.|::|....|..:.
  Rat   141 SENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205

  Fly   350 SLRTLSLHNNRI----------------------------------------------------- 361
            .:|||.||:|.:                                                     
  Rat   206 KIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYVCPGPHSEA 270

  Fly   362 -----SSLS----GTIFNNL------------ANL----VTLDLTTNRISHIDGNAFVELNNLNE 401
                 :|||    .:..||:            |||    |.:.|..|.|..|...||::...|..
  Rat   271 PACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKR 335

  Fly   402 LFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDFQGLNNLKILLLNNNILKNFDARAFE 466
            :.:.:|.:|.|..|.|..:.:||.|.|:.|.:|.:....|.||.:|::||||.|.:.......|:
  Rat   336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQ 400

  Fly   467 PLSQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKNPWHCDCRALYLARWIREFVLKLWDGQQP 531
            .|..|..|.:..|||..:..|....|:::..:.|.:||:.|||...:||.::::..::....:  
  Rat   401 DLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGAR-- 463

  Fly   532 MCRGPGDLGGHEVGLLRYDDL-CDG------QWASMLSLSPRLPVRKHQISTPMNYTDYFNLYL- 588
             |..|..|....:..::.... |.|      :::|...:....|.:.....|   ..|..|..| 
  Rat   464 -CSSPRRLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGT---IVDCSNQKLS 524

  Fly   589 ---KHIYNGTTDEELKEADITSVS----IKKVHN 615
               .|:...|||..|.:.||..:.    .||:.|
  Rat   525 RIPSHLPEYTTDLRLNDNDIAVLEATGIFKKLPN 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 13/58 (22%)
leucine-rich repeat 187..206 CDD:275380 7/18 (39%)
LRR_RI <201..386 CDD:238064 58/262 (22%)
leucine-rich repeat 207..230 CDD:275380 1/22 (5%)
leucine-rich repeat 231..254 CDD:275380 8/22 (36%)
LRR_8 253..313 CDD:290566 19/59 (32%)
leucine-rich repeat 255..278 CDD:275380 9/22 (41%)
leucine-rich repeat 279..302 CDD:275380 8/22 (36%)
LRR_8 303..361 CDD:290566 19/57 (33%)
leucine-rich repeat 303..326 CDD:275380 7/22 (32%)
leucine-rich repeat 327..350 CDD:275380 6/22 (27%)
LRR_8 349..407 CDD:290566 22/135 (16%)
LRR_4 350..390 CDD:289563 19/117 (16%)
leucine-rich repeat 351..374 CDD:275380 11/96 (11%)
leucine-rich repeat 375..398 CDD:275380 8/26 (31%)
LRR_8 398..>443 CDD:290566 13/44 (30%)
leucine-rich repeat 399..422 CDD:275380 6/22 (27%)
leucine-rich repeat 423..443 CDD:275380 7/19 (37%)
leucine-rich repeat 471..494 CDD:275380 7/22 (32%)
LRRCT 503..554 CDD:214507 10/51 (20%)
Slit3NP_112611.1 leucine-rich repeat 311..332 CDD:275380 6/20 (30%)
LRR_4 331..371 CDD:289563 12/39 (31%)
LRR 8 332..353 6/20 (30%)
leucine-rich repeat 333..356 CDD:275380 6/22 (27%)
LRR_8 355..439 CDD:290566 26/83 (31%)
LRR 9 356..377 7/20 (35%)
leucine-rich repeat 357..377 CDD:275380 7/19 (37%)
LRR 10 380..401 7/20 (35%)
leucine-rich repeat 381..404 CDD:275380 8/22 (36%)
LRR 11 404..425 6/20 (30%)
leucine-rich repeat 405..426 CDD:275380 6/20 (30%)
TPKR_C2 437..>467 CDD:301599 8/32 (25%)
LRRNT 505..535 CDD:214470 6/32 (19%)
LRR 12 533..554 6/20 (30%)
leucine-rich repeat 534..558 CDD:275380 8/23 (35%)
LRR_4 535..574 CDD:289563 8/24 (33%)
LRR_8 557..617 CDD:290566 1/2 (50%)
LRR 13 558..579 1/1 (100%)
leucine-rich repeat 559..582 CDD:275380 135/554 (24%)
LRR 14 582..603
leucine-rich repeat 583..606 CDD:275380
LRR_8 605..665 CDD:290566
LRR 15 606..627
leucine-rich repeat 607..630 CDD:275380
LRR 16 630..651
leucine-rich repeat 631..654 CDD:275380
leucine-rich repeat 655..745 CDD:275380
LRRCT 663..711 CDD:214507
LRRNT 725..756 CDD:214470
LRR_RI <741..869 CDD:238064
leucine-rich repeat 746..776 CDD:275380
LRR 17 753..774
LRR_8 775..835 CDD:290566
LRR 18 776..797
leucine-rich repeat 777..800 CDD:275380
LRR 19 800..821
leucine-rich repeat 801..824 CDD:275380
LRR 20 824..845
leucine-rich repeat 825..846 CDD:275380
LRRCT 857..906 CDD:214507
EGF_CA 956..994 CDD:238011
EGF_CA 998..1031 CDD:238011
EGF_CA 1035..1072 CDD:238011
EGF_CA 1074..1110 CDD:238011
EGF 1123..1153 CDD:278437
Laminin_G_2 1188..1314 CDD:280389
EGF_CA 1370..1402 CDD:238011
GHB_like 1463..1519 CDD:304424
LRRNT 33..60 CDD:279764 6/24 (25%)
LRR_RI <49..220 CDD:238064 58/196 (30%)
LRR_8 61..121 CDD:290566 22/83 (27%)
LRR 1 62..83 7/20 (35%)
leucine-rich repeat 64..86 CDD:275380 8/45 (18%)
LRR 2 86..107 7/20 (35%)
leucine-rich repeat 87..110 CDD:275380 8/22 (36%)
LRR_8 109..169 CDD:290566 19/59 (32%)
LRR 3 110..131 9/20 (45%)
leucine-rich repeat 111..134 CDD:275380 9/22 (41%)
LRR 4 134..155 7/20 (35%)
leucine-rich repeat 135..158 CDD:275380 8/22 (36%)
LRR_8 157..217 CDD:290566 19/59 (32%)
LRR 5 158..179 5/20 (25%)
leucine-rich repeat 159..182 CDD:275380 7/22 (32%)
LRR 6 182..203 6/20 (30%)
leucine-rich repeat 183..206 CDD:275380 6/22 (27%)
leucine-rich repeat 207..309 CDD:275380 14/101 (14%)
LRRNT 280..311 CDD:214470 5/30 (17%)
LRR_RI <295..457 CDD:238064 48/161 (30%)
LRR 7 308..329 7/20 (35%)
LRR_8 311..367 CDD:290566 17/55 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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