DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7509 and lrrc15

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001074151.1 Gene:lrrc15 / 791200 ZFINID:ZDB-GENE-031113-8 Length:564 Species:Danio rerio


Alignment Length:503 Identity:116/503 - (23%)
Similarity:212/503 - (42%) Gaps:103/503 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 CRCNPDTKSFTCWNTNLKSVPVTQVIPMNMVNIDLSRNILSTLHKDTFRGLTVLKELDISHNVLD 218
            |:|  ......|...::|.:|    :||.                      ..:..|.||:..:.
Zfish    25 CQC--QVTKIVCQGFSVKEIP----LPMP----------------------PTINALVISNTSIQ 61

  Fly   219 FL-PFDLFQDLDSLLVLRIQNNQLEDIDHRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTVI 282
            .| |.|.....::|.:...:|:.:.:::..||.:..|||.|..|...:..||:::|.:...||.:
Zfish    62 SLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNALGFSGTMLTSLPDNLFQNLTALTTL 126

  Fly   283 NMCDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFAG 347
            .:..|:::..|.:||.....:.:||:|:|.:|.||..:.|.|.:|:.|....|.|.::....|.|
Zfish   127 TLSGNKLEVLPSSLLTPLANVNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQG 191

  Fly   348 LRSLRTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSSI 412
            |..||:|.|..|:::.:...:|::|.||..|.|..|:|..:..|.|.::.||.:|:|..|.:|.:
Zfish   192 LSHLRSLFLQQNQLTDIPAGLFDDLVNLEVLHLQDNKIEQLPANLFAKVQNLKKLYLSSNRLSLL 256

  Fly   413 PADLFLNVSALTRLTLFSNN-----------------------LTTLEADDFQGLNNLKILLLNN 454
            |:.:||::..||.::|:.|.                       ||.||.:.|..|.|:::|:::.
Zfish   257 PSGIFLSLPNLTHISLYDNRLSRLMPETFGTMALQELWLYDNLLTHLEENVFSNLTNIRLLVISR 321

  Fly   455 NILKNFDARAFEPLSQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLD------------------ 501
            |.::.....||..|.:|:::.:.:|:|..:..|...||.||..:.::                  
Zfish   322 NRIQYISPGAFNGLKELKEVSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRL 386

  Fly   502 ------------------------------KNPWHCDCRALYLARWIREFVLKLWDGQQPMCRGP 536
                                          :|||.||...:....|:.:...|:.:....||..|
Zfish   387 SLLEMQNNSLQNLPKDFLNTLSIVENVILHENPWRCDQDIIPFWGWLSQHSEKVKNLSLVMCSSP 451

  Fly   537 GDLGGHEVGLLRYDDLCDGQWASMLSL---SPRLPVRKHQISTPMNYT 581
            ..|.|..|..|..||:...:..:|.::   |...|..:.:.....|:|
Zfish   452 PPLNGRNVRELIEDDIMVQEMTTMTTVDTSSHNTPASETKRPPDSNFT 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 8/59 (14%)
leucine-rich repeat 187..206 CDD:275380 0/18 (0%)
LRR_RI <201..386 CDD:238064 52/185 (28%)
leucine-rich repeat 207..230 CDD:275380 6/23 (26%)
leucine-rich repeat 231..254 CDD:275380 4/22 (18%)
LRR_8 253..313 CDD:290566 18/59 (31%)
leucine-rich repeat 255..278 CDD:275380 7/22 (32%)
leucine-rich repeat 279..302 CDD:275380 6/22 (27%)
LRR_8 303..361 CDD:290566 21/57 (37%)
leucine-rich repeat 303..326 CDD:275380 9/22 (41%)
leucine-rich repeat 327..350 CDD:275380 7/22 (32%)
LRR_8 349..407 CDD:290566 19/57 (33%)
LRR_4 350..390 CDD:289563 13/39 (33%)
leucine-rich repeat 351..374 CDD:275380 7/22 (32%)
leucine-rich repeat 375..398 CDD:275380 7/22 (32%)
LRR_8 398..>443 CDD:290566 18/67 (27%)
leucine-rich repeat 399..422 CDD:275380 8/22 (36%)
leucine-rich repeat 423..443 CDD:275380 9/42 (21%)
leucine-rich repeat 471..494 CDD:275380 6/22 (27%)
LRRCT 503..554 CDD:214507 16/50 (32%)
lrrc15NP_001074151.1 LRRNT 21..48 CDD:214470 7/50 (14%)
leucine-rich repeat 53..73 CDD:275380 6/19 (32%)
LRR_RI <163..253 CDD:238064 29/89 (33%)
LRR_8 170..229 CDD:290566 19/58 (33%)
leucine-rich repeat 171..194 CDD:275380 7/22 (32%)
leucine-rich repeat 195..218 CDD:275380 7/22 (32%)
LRR_8 218..277 CDD:290566 21/58 (36%)
leucine-rich repeat 219..242 CDD:275380 7/22 (32%)
LRR_4 241..280 CDD:289563 13/38 (34%)
leucine-rich repeat 243..266 CDD:275380 8/22 (36%)
leucine-rich repeat 267..289 CDD:275380 4/21 (19%)
leucine-rich repeat 290..313 CDD:275380 6/22 (27%)
LRR_8 312..372 CDD:290566 14/59 (24%)
leucine-rich repeat 314..337 CDD:275380 5/22 (23%)
leucine-rich repeat 338..361 CDD:275380 6/22 (27%)
leucine-rich repeat 362..385 CDD:275380 1/22 (5%)
TPKR_C2 418..467 CDD:301599 15/48 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I4201
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D595054at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.