DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and Lrrtm1

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001349038.1 Gene:Lrrtm1 / 74342 MGIID:2389173 Length:522 Species:Mus musculus


Alignment Length:432 Identity:108/432 - (25%)
Similarity:175/432 - (40%) Gaps:89/432 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 GVCRCNPDTKSFTCWNTNLKSVPVTQVIPMNMVNIDLSRNILSTLHKDTFRGLTVLKELDISHNV 216
            |.|||  :.:...|...||...|...   ..::.:.|..|.||.|....|.||..|..|.:.||.
Mouse    41 GQCRC--EGRLLYCEALNLTEAPHNL---SGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNH 100

  Fly   217 LDFLPFDLFQDLDSLLVLRIQNNQLEDIDHRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTV 281
            :..:..|.||.|..:..|.:.:||:.::.:.||..:.||..:|||.|::..|...:|:..::||.
Mouse   101 ICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTT 165

  Fly   282 INMCDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFA 346
            ::|..|.||..|..:.:|                        ...||.||.|:||:..:..:.||
Mouse   166 LHMRANAIQFVPVRIFQD------------------------CRSLKFLDIGYNQLKSLARNSFA 206

  Fly   347 GLRSLRTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSS 411
            ||..|..|.|.:|                   ||.....:|     |..|.:|:.|.|.:|.::.
Mouse   207 GLFKLTELHLEHN-------------------DLIKVNFAH-----FPRLISLHSLCLRRNKVAI 247

  Fly   412 IPADLFLNVSALTRLTLFSNNLTTLEADDFQGLNNLKILLLNNNILKNFDARAFEPLSQLEKLRI 476
            :       ||:|                  ..:.||:.:.|:.|.::..:...||.:..|:.|::
Mouse   248 V-------VSSL------------------DWVWNLEKMDLSGNEIEYMEPHVFETVPYLQTLQL 287

  Fly   477 DSNKLMFLPHGALHGLKNLVAVKLDKNPWHCDCRALYLARWIREFVLKLWDGQQPMCRGPGDLGG 541
            |||:|.::....|:..|:|.::.|..|.|.|......||.|:..|..: :|... .|..|....|
Mouse   288 DSNRLTYIEPRILNSWKSLTSITLAGNLWDCGRNVCALASWLSNFQGR-YDANL-QCASPEYAQG 350

  Fly   542 HEVGLLRYDDLCDGQWASMLSLSPRLPVRKHQISTPM-NYTD 582
                    :|:.|..:|..|......|...|.:|..: |.:|
Mouse   351 --------EDVLDAVYAFHLCEDGAEPTSGHLLSVAVTNRSD 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 18/58 (31%)
leucine-rich repeat 187..206 CDD:275380 8/18 (44%)
LRR_RI <201..386 CDD:238064 49/184 (27%)
leucine-rich repeat 207..230 CDD:275380 8/22 (36%)
leucine-rich repeat 231..254 CDD:275380 5/22 (23%)
LRR_8 253..313 CDD:290566 16/59 (27%)
leucine-rich repeat 255..278 CDD:275380 7/22 (32%)
leucine-rich repeat 279..302 CDD:275380 8/22 (36%)
LRR_8 303..361 CDD:290566 15/57 (26%)
leucine-rich repeat 303..326 CDD:275380 0/22 (0%)
leucine-rich repeat 327..350 CDD:275380 11/22 (50%)
LRR_8 349..407 CDD:290566 12/57 (21%)
LRR_4 350..390 CDD:289563 7/39 (18%)
leucine-rich repeat 351..374 CDD:275380 4/22 (18%)
leucine-rich repeat 375..398 CDD:275380 5/22 (23%)
LRR_8 398..>443 CDD:290566 7/44 (16%)
leucine-rich repeat 399..422 CDD:275380 5/22 (23%)
leucine-rich repeat 423..443 CDD:275380 1/19 (5%)
leucine-rich repeat 471..494 CDD:275380 7/22 (32%)
LRRCT 503..554 CDD:214507 12/50 (24%)
Lrrtm1NP_001349038.1 LRR 1 64..87 6/25 (24%)
LRR <75..>315 CDD:227223 79/312 (25%)
LRR 2 89..111 6/21 (29%)
leucine-rich repeat 91..114 CDD:275380 8/22 (36%)
LRR 3 112..135 6/22 (27%)
leucine-rich repeat 115..138 CDD:275380 5/22 (23%)
LRR 4 136..159 8/22 (36%)
leucine-rich repeat 139..162 CDD:275380 7/22 (32%)
LRR 5 161..183 7/21 (33%)
leucine-rich repeat 163..186 CDD:275380 8/46 (17%)
LRR 6 184..207 8/22 (36%)
leucine-rich repeat 187..210 CDD:275380 11/22 (50%)
LRR 7 209..231 8/45 (18%)
leucine-rich repeat 211..234 CDD:275380 9/46 (20%)
LRR 8 233..255 7/46 (15%)
leucine-rich repeat 235..257 CDD:275380 7/46 (15%)
LRR 9 256..278 5/21 (24%)
leucine-rich repeat 258..281 CDD:275380 5/22 (23%)
LRR 10 280..302 7/21 (33%)
leucine-rich repeat 282..300 CDD:275380 6/17 (35%)
leucine-rich repeat 306..318 CDD:275378 4/11 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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