DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and lgi2a

DIOPT Version :10

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001034730.1 Gene:lgi2a / 654827 ZFINID:ZDB-GENE-060217-2 Length:536 Species:Danio rerio


Alignment Length:155 Identity:45/155 - (29%)
Similarity:79/155 - (50%) Gaps:6/155 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 GNAFVEL---NNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDFQGLNNLKILL 451
            |:::|..   |:::.|.:...:.|.:...:|.::.:|..|.|.||.|||:..|.|.||.:|:.|.
Zfish    42 GSSYVPRYIPNDVSSLSIVNGTFSEVKEAMFSHMPSLQLLLLNSNALTTVRDDAFSGLPHLEYLF 106

  Fly   452 LNNNILKNFDARAFEPLSQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKNPWHCDCRALYLAR 516
            :.||.::.....:|..|..|..|.:.:|.:..||......|.:|:.:.|..|.:.|||||.:|..
Zfish   107 IENNKIETTSKYSFRGLRDLTHLSLANNNIKALPRELFIDLDSLIELDLRGNVFECDCRAKWLMM 171

  Fly   517 WIREFVLKLWDGQQPMCRGPGDLGG 541
            |::.....:.|   .:|.||.::.|
Zfish   172 WLKSTNATVSD---VLCAGPEEMKG 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR 185..>437 CDD:443914 14/49 (29%)
leucine-rich repeat 187..206 CDD:275380
leucine-rich repeat 207..230 CDD:275380
leucine-rich repeat 231..254 CDD:275380
leucine-rich repeat 255..278 CDD:275380
leucine-rich repeat 279..302 CDD:275380
leucine-rich repeat 303..326 CDD:275380
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..374 CDD:275380
leucine-rich repeat 375..398 CDD:275380 2/10 (20%)
leucine-rich repeat 399..422 CDD:275380 3/22 (14%)
leucine-rich repeat 423..443 CDD:275380 10/19 (53%)
leucine-rich repeat 471..494 CDD:275380 6/22 (27%)
PCC 476..>561 CDD:188093 19/66 (29%)
lgi2aNP_001034730.1 LRR_8 54..112 CDD:404697 19/57 (33%)
LRR_8 100..158 CDD:404697 14/57 (25%)
leucine-rich repeat 102..125 CDD:275378 6/22 (27%)
leucine-rich repeat 126..149 CDD:275378 6/22 (27%)
PCC 131..>206 CDD:188093 19/66 (29%)
leucine-rich repeat 150..162 CDD:275378 3/11 (27%)
EPTP 210..250 CDD:461033
EPTP 257..295 CDD:461033
EPTP 302..347 CDD:461033
EPTP 351..392 CDD:461033
EPTP 398..439 CDD:461033
EPTP 443..483 CDD:461033
EPTP 490..529 CDD:461033
Blue background indicates that the domain is not in the aligned region.

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