DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and Slit1

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_075242.1 Gene:Slit1 / 65047 RGDID:69307 Length:1531 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566
leucine-rich repeat 187..206 CDD:275380
LRR_RI <201..386 CDD:238064
leucine-rich repeat 207..230 CDD:275380
leucine-rich repeat 231..254 CDD:275380
LRR_8 253..313 CDD:290566
leucine-rich repeat 255..278 CDD:275380
leucine-rich repeat 279..302 CDD:275380
LRR_8 303..361 CDD:290566
leucine-rich repeat 303..326 CDD:275380
leucine-rich repeat 327..350 CDD:275380
LRR_8 349..407 CDD:290566
LRR_4 350..390 CDD:289563
leucine-rich repeat 351..374 CDD:275380
leucine-rich repeat 375..398 CDD:275380
LRR_8 398..>443 CDD:290566
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 423..443 CDD:275380
leucine-rich repeat 471..494 CDD:275380
LRRCT 503..554 CDD:214507
Slit1NP_075242.1 LRRNT 33..64 CDD:214470
leucine-rich repeat 43..62 CDD:275380
LRR_8 61..121 CDD:290566
LRR 1 62..83
leucine-rich repeat 63..86 CDD:275380
LRR 2 86..107
LRR_RI <87..275 CDD:238064
leucine-rich repeat 87..110 CDD:275380
LRR_8 109..169 CDD:290566
LRR 3 110..131
leucine-rich repeat 111..134 CDD:275380
LRR 4 134..155
leucine-rich repeat 135..158 CDD:275380
LRR 5 158..179
LRR_8 159..217 CDD:290566
leucine-rich repeat 159..182 CDD:275380
LRR 6 182..203
leucine-rich repeat 183..206 CDD:275380
leucine-rich repeat 207..334 CDD:275380
LRRNT 282..313 CDD:214470
LRR 7 310..331
LRR_8 312..369 CDD:290566
LRR_4 334..373 CDD:289563
LRR 8 334..355
leucine-rich repeat 335..358 CDD:275380
LRR 9 358..379
leucine-rich repeat 359..379 CDD:275380
LRR 10 382..403
leucine-rich repeat 383..406 CDD:275380
LRR_8 389..441 CDD:290566
LRR_RI <398..627 CDD:238064
LRR 11 406..427
leucine-rich repeat 407..428 CDD:275380
leucine-rich repeat 431..528 CDD:275380
leucine-rich repeat 529..566 CDD:275380
LRR 12 541..562
LRR_8 543..601 CDD:290566
LRR_4 543..582 CDD:289563
LRR 13 566..587
leucine-rich repeat 567..590 CDD:275380
LRR_8 589..649 CDD:290566
LRR 14 590..611
leucine-rich repeat 591..614 CDD:275380
LRR 15 614..635
LRR_4 615..654 CDD:289563
leucine-rich repeat 615..638 CDD:275380
LRR 16 638..659
leucine-rich repeat 639..660 CDD:275380
leucine-rich repeat 663..754 CDD:275380
LRRCT 671..719 CDD:214507
LRRNT 733..765 CDD:214470
leucine-rich repeat 755..785 CDD:275380
LRR_8 761..820 CDD:290566
LRR 17 762..783
LRR 18 785..806
LRR_4 786..827 CDD:289563
leucine-rich repeat 786..809 CDD:275380
LRR 19 809..830
leucine-rich repeat 810..830 CDD:275380
LRR 20 833..854
leucine-rich repeat 834..857 CDD:275380
LRRCT 866..915 CDD:214507
EGF_CA 927..962 CDD:238011
EGF_CA 966..1002 CDD:238011
EGF_CA 1005..1041 CDD:238011
EGF_CA 1044..1080 CDD:238011
EGF_CA 1085..1119 CDD:238011
LamG 1186..1319 CDD:214598
GHB_like <1494..1529 CDD:304424
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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