DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and AgaP_AGAP001002

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:XP_003437165.1 Gene:AgaP_AGAP001002 / 5666799 VectorBaseID:AGAP001002 Length:995 Species:Anopheles gambiae


Alignment Length:561 Identity:136/561 - (24%)
Similarity:231/561 - (41%) Gaps:107/561 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 PPKSKANGHNDGDVNGGEINAMSHLA-----NFDLVKRVRQIESRLRSVEQPVWHLATGSQIEWN 147
            |...|...|....|:|..:..:..|.     |.|:.|..:::.|.|                   
Mosquito   162 PQLKKIEFHGRNRVSGTILQQLKQLKELYMHNSDMKKLPKELVSNL------------------- 207

  Fly   148 HCTSGVCRCNPDTKSFTCWNTNLKSVPVTQVIPMNMVNIDLSRNILSTLHKDTFRGLTVLKELDI 212
                      |..::.......||.|.....:| |::.:::|.|.|..|.::.|..|..||.||:
Mosquito   208 ----------PKLETLYLDKNKLKHVSQFTTLP-NLMYLNISSNQLVKLQENVFSRLPKLKILDL 261

  Fly   213 SHNVLDFLPFDLFQDLDSLLVLRIQNNQLED--IDHRTFWKLRNLNILDLSKNEIGMLPESIFYH 275
            |.|.|..|..|||.:.:.|.|.:..:.:..:  ::...|.:.:.|..:.||..:|..|||.||.|
Mosquito   262 SSNKLKRLATDLFMENNHLEVFKADDQKCSELVLEKNVFTEQKFLKEVSLSNCKITALPEGIFQH 326

  Fly   276 AQRLTVINMCDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGS--------IRYLTKLKTLDF 332
            ..:|..:::..|::|:.|.:||.|...: ||.:..|:...:...|        ..||..:.  .|
Mosquito   327 CLQLFKVDLSHNKLQSLPEDLLSDSFAV-ELYLQHNEFINMQPESQLLGANDFSHYLDYVS--PF 388

  Fly   333 GWNQIAKIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNLA-NLVTLDLTTNRISHIDGNAFVEL 396
            ...|:.|       ...||:.|.||||::..:....|.:.: :|:.|:|:.||::         |
Mosquito   389 SSRQLLK-------SFSSLKQLQLHNNQLYMIDVDAFKSQSHSLIFLNLSHNRLT---------L 437

  Fly   397 NNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDFQG-LNNLKILLLNNNILKNF 460
            :..|:..:  ||.|.|   ||..:..|..|.|..|.:|.: .|.|:. ::||:.|.|::|.:.:.
Mosquito   438 HENNDRMI--NSTSWI---LFRPLIKLAHLDLSYNEITNI-FDHFKNFMDNLQSLDLSHNFITHI 496

  Fly   461 DARAFEPLS-QLEKLRIDSNKLMFLPH--------GALHGLKNLVAVKLDKNPWHCDCRALYLAR 516
            ....|..|| ::..:.::|||   :.|        ..||.|.|  .:.|..||.:|||.:..|..
Mosquito   497 SYTDFPFLSAKINLVNLESNK---ITHPDFDLSRIEPLHRLPN--EIFLADNPLNCDCISSSLVT 556

  Fly   517 WI-------REFVLKLWDGQQPMCRGPGDLGGHEVGLLRYDD-LCDGQWASMLSLSPRLPVRKHQ 573
            ::       :...||   |.|  |..|..|.|.:...||.:| ||:.:     :|....|:....
Mosquito   557 YLQAHLNASKSIPLK---GLQ--CAQPPALFGRKPQTLRAEDLLCEKE-----TLFGFCPIECKC 611

  Fly   574 ISTPMNYTDYFNLYLKHIYNGTTDEELKEADITSVSIKKVH 614
            ...|::.....|....::   |....:|...|...|..::|
Mosquito   612 YKRPVDQAAIINCTAANL---TRVPVIKSPSIIKCSFIELH 649

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 20/58 (34%)
leucine-rich repeat 187..206 CDD:275380 6/18 (33%)
LRR_RI <201..386 CDD:238064 55/195 (28%)
leucine-rich repeat 207..230 CDD:275380 11/22 (50%)
leucine-rich repeat 231..254 CDD:275380 3/24 (13%)
LRR_8 253..313 CDD:290566 20/59 (34%)
leucine-rich repeat 255..278 CDD:275380 10/22 (45%)
leucine-rich repeat 279..302 CDD:275380 7/22 (32%)
LRR_8 303..361 CDD:290566 16/65 (25%)
leucine-rich repeat 303..326 CDD:275380 6/30 (20%)
leucine-rich repeat 327..350 CDD:275380 3/22 (14%)
LRR_8 349..407 CDD:290566 15/58 (26%)
LRR_4 350..390 CDD:289563 13/40 (33%)
leucine-rich repeat 351..374 CDD:275380 7/23 (30%)
leucine-rich repeat 375..398 CDD:275380 6/22 (27%)
LRR_8 398..>443 CDD:290566 14/44 (32%)
leucine-rich repeat 399..422 CDD:275380 7/22 (32%)
leucine-rich repeat 423..443 CDD:275380 7/19 (37%)
leucine-rich repeat 471..494 CDD:275380 7/30 (23%)
LRRCT 503..554 CDD:214507 18/58 (31%)