DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and lrrc47

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001103842.1 Gene:lrrc47 / 553404 ZFINID:ZDB-GENE-060503-289 Length:565 Species:Danio rerio


Alignment Length:426 Identity:98/426 - (23%)
Similarity:172/426 - (40%) Gaps:77/426 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 MVNIDLSRNILSTLHKD--------TFRGLTVLKELDISHNVLDFLPFDLFQDLDSLLVLRI--- 236
            |...:.|:|:...:.|.        ..:|..|.|::..|..        |...|.||.:|..   
Zfish     1 MAEENSSQNVWPEIEKAEKENRRELVLQGSAVDKKIQSSGG--------LHAGLYSLSLLNYLEV 57

  Fly   237 -QNNQLEDIDHRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTVINMCDNQIQNFPPNL--LR 298
             |...|.:| |.....|.:|..|.|.:|::..:|:|| .|.:.:.|:::..||:|..|..:  |.
Zfish    58 SQCPSLHEI-HENIRNLSHLQSLILCRNKLTSVPKSI-GHLKAVKVLDLSVNQLQALPEEICALT 120

  Fly   299 DQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFF-AGLRSLRTLSLHNNRIS 362
            :   |..|::|.|.::.|..| :....||.:::...|:::::.:|.: :||..|.::....|.|.
Zfish   121 E---LNTLNVSCNSLTALPDG-LSKCVKLASINVSKNELSRLPEDLWCSGLELLSSIIASENAIE 181

  Fly   363 SLSGTIFNNLANLVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSSIPADLFLNVSALTRLT 427
            .||..| .||.:|..|||:.|::..:... ..:...|.|.....|.:..            .||.
Zfish   182 ELSSEI-QNLPSLKVLDLSNNKLQELPAE-LADCPKLKETNFKGNKLKD------------KRLE 232

  Fly   428 LFSNNLTTLEADDF---QGLNNLKILLLNNNILKNFDA--------RAFEPLSQLEKLRIDSNKL 481
            ...|...|....|:   .|....|....:..:.:..|:        .|.:..|:.|:..:|....
Zfish   233 KMVNGCPTKSVLDYLRAGGRGKGKGKQQDGEVSEKVDSGRNASKKKSAAKQKSKKEEEDVDELNQ 297

  Fly   482 MFLPHGALH--------GLKNLVAVKLDKNPW--HCDCRALYLARW--IREFVL---KLWDGQQP 531
            |.:  ..||        .:|...||| |..|:  .|..:.:.|.:.  ::.|::   ||.|   .
Zfish   298 MVV--RILHISESPTAVTVKVSAAVK-DVRPYIVCCIVKGMNLRQGNSLKRFLVAQTKLHD---E 356

  Fly   532 MC--RGPGDLGGHEVGLLRYDDLCDGQWASMLSLSP 565
            :|  |....:..|::|||:|..|.|.:....|.:.|
Zfish   357 ICAKRTTATIATHDLGLLKYPLLYDARPPDTLKIIP 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 14/69 (20%)
leucine-rich repeat 187..206 CDD:275380 4/26 (15%)
LRR_RI <201..386 CDD:238064 53/191 (28%)
leucine-rich repeat 207..230 CDD:275380 4/22 (18%)
leucine-rich repeat 231..254 CDD:275380 7/26 (27%)
LRR_8 253..313 CDD:290566 18/61 (30%)
leucine-rich repeat 255..278 CDD:275380 8/22 (36%)
leucine-rich repeat 279..302 CDD:275380 6/24 (25%)
LRR_8 303..361 CDD:290566 14/58 (24%)
leucine-rich repeat 303..326 CDD:275380 6/22 (27%)
leucine-rich repeat 327..350 CDD:275380 5/23 (22%)
LRR_8 349..407 CDD:290566 15/57 (26%)
LRR_4 350..390 CDD:289563 13/39 (33%)
leucine-rich repeat 351..374 CDD:275380 8/22 (36%)
leucine-rich repeat 375..398 CDD:275380 5/22 (23%)
LRR_8 398..>443 CDD:290566 8/47 (17%)
leucine-rich repeat 399..422 CDD:275380 3/22 (14%)
leucine-rich repeat 423..443 CDD:275380 5/22 (23%)
leucine-rich repeat 471..494 CDD:275380 5/30 (17%)
LRRCT 503..554 CDD:214507 15/59 (25%)
lrrc47NP_001103842.1 LRR_RI <74..212 CDD:238064 39/144 (27%)
LRR_8 74..132 CDD:290566 18/61 (30%)
leucine-rich repeat 76..98 CDD:275380 8/22 (36%)
leucine-rich repeat 99..121 CDD:275380 6/21 (29%)
leucine-rich repeat 122..144 CDD:275380 6/22 (27%)
leucine-rich repeat 145..169 CDD:275380 5/23 (22%)
LRR_8 170..226 CDD:290566 16/57 (28%)
leucine-rich repeat 170..192 CDD:275380 8/22 (36%)
leucine-rich repeat 193..215 CDD:275380 5/22 (23%)
B3_4 324..497 CDD:214876 18/72 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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